scholarly journals A quantitative multivariate methodology for unsupervised class identification in pistachio (Pistacia vera L.) plant leaves size

2020 ◽  
Vol 18 (4) ◽  
pp. e0208
Author(s):  
Francesca Antonucci ◽  
Rossella Manganiello ◽  
Corrado Costa ◽  
Virgilio Irione ◽  
Luciano Ortenzi ◽  
...  

Aim of study: Genetic diversity of pistachio, can be evaluated by using different descriptors, as adopted in international certification systems. Mainly the descriptors are morphological traits as leaf, which represents an important organ for its sensibility to growth conditions during the expansion phase. This study adopted a rapid and quantitative non-hierarchic clustering classification (k-means), to extract size classes basing on the contemporary combination of different morphological traits (i.e., leaf stalk length, terminal leaf length, terminal leaf width and terminal leaf ratio) of a varietal collection composed by 21 pistachio cultivars.Area of study: Worldwide.Material and methods: The unsupervised non-hierarchic clustering technique was adopted to the entire samples of pistachio leaves from k=2 to k=15 for both four morphological variables (i.e., leaf stalk length, terminal leaf length, terminal leaf width and terminal leaf ratio) and three morphological variables (i.e., terminal leaf length, terminal leaf width and terminal leaf ratio).Main results: A classification model only on the three morphological variables (for results of statistical analysis in which the groups resulted to be more separated and different for all the variables), with k= 5 (five groups), was constructed using a non-linear artificial neural network approach. The percentages of bad prediction in both training and testing resulted equal to 0%. The “terminal leaf length” returned the higher impact (44.89%).Research highlights: The contemporary combination of different morphological leaf traits, allowed to create an automatic classification of size classes of great importance for cultivar identification and comparison.

2017 ◽  
Vol 9 (1) ◽  
pp. 364-369
Author(s):  
Airadevi P. Angadi ◽  
B. S. Reddy ◽  
R. C. Jagadeesha ◽  
Balaji S. Kulkarni ◽  
S. Nishani

The study pertaining to the effect of summer season on correlation analysis in bird of paradise (Strelitzia reginae) was carried out among forty progenies. The results of correlation analysis for twelve parameters (plant height, stem girth, leaf length, leaf width, number of leaves per plant, number of suckers/m 2 , flower stalk length, flower stalk girth, spath length, no. of bracts, vase life and no. of flowers/ m 2 ) at genotypic and phenotypic levels revealed that number of flowers per m 2 of progenies during summer, 2011 showed positive and significant correlations with plant height (0.357 and 0.237) and number of suckers/ m2 (0.880 and 0.899). Whereas, it showed positive and significant correlation with stem girth (0.203), leaf width (0.202) and flower stalk girth (0.265) at genotypic level only. While during summer 2012, number of flowers per m 2 showed positive correlations with plant height (0.265 and 0.242), stem girth (0.232 and 0.215), number of suckers/ m 2 (0.913 and 0.900) and flower stalk length (0.268 and 0.249) at genotypic and phenotypic levels. Hence, the selection of these characters would be effective in improving yield in bird of paradise crop.


2017 ◽  
Vol 62 (2) ◽  
pp. 115-131
Author(s):  
David Animasaun ◽  
Joseph Morakinyo ◽  
Rama Krishnamurthy ◽  
Oba Mustapha

The study assessed the genetic diversity of pearl millet accessions grown in Nigeria and India based on morpho-agronomic traits in order to identify genotypes with superior characters which could be utilized in breeding programmes. Twenty-four pearl millet accessions were grown and evaluated for agronomic and morphological traits during the dry and wet seasons of 2015-2016. Data collected on the accessions using standard descriptors were analysed statistically. IP22281 had the highest mean plant height (108.90 cm) while NGB00531 recorded the lowest (61.02 cm). Significant intra-specific variation existed in number of leaves per plant, leaf length, leaf width, number of nodes and internode length, however, stem girth was similar for the accessions. Tillering was generally poor with the highest value (1.60 tillers per plant) found in NGB00531. A significant positive correlation occurred between plant height, number of leaves, leaf length and leaf width. Panicles emerged between 44 and 56 days and NGB00548 had the shortest maturity time. Also, panicle length and peduncle diameter varied significantly for the accessions. The highest grain yield and 1000-grain weight were recorded in NGB00616 and the lowest yield and weight were recorded in IP22269. The principal component analysis grouped the accessions into four clusters, comprising mixtures of Nigerian and Indian members. Similarly, the dendrogram grouped the accessions into two main groups which were sub-divided into smaller clusters with accessions from Nigeria and India in the same cluster. The study concludes that variations in morpho-agronomic and yield characters among the accessions studied could be harnessed for crop improvement. The clustering pattern of these accessions indicated their genetic relatedness, possibly from the same progenitor, but separation by geographical or ecological isolation mechanisms.


2018 ◽  
Vol 7 (4) ◽  
pp. 2178
Author(s):  
Satish Kumar Rai ◽  
Ravindra P. Shukla ◽  
Sanjay Kumar Pandey

Measurements of plant traits are required for evaluating community structure and its ecological responses to varying environmental conditions. The grouping on the basis of functional traits of plants has strong predictive power of important ecosystem responses to environmental perturbation. The morphological traits and their interrelationship among associated species have been analyzed to understand the quantitative variation within regional sal dominated forests. Data for five morphometric traits viz., plant height, leaf length, leaf width, flower size and fruit size, were observed for 193 woody (tree, shrub and liana) species belonging to 56 families within understorey of sal forest. Forty-one families were polytypic in nature. One-way ANOVA was used to detect how variation among all the traits was distributed among habit groups. A significant positive relationship was noticed between plant height and each of the leaf length, leaf width and fruit size. Of the different morphometric traits observed only plant height and fruit size showed wider variation among three life–form categories. Overall, our results suggest that measurement of plant morphometric characters are the major drivers of understory sal associates of the region. Hence, the morphological traits of sal associates should be carefully considered in framing the management and conservation strategy of regional sal forests.


Author(s):  
Ben Hadj-Daoud H ◽  
◽  
Ben Salem I ◽  
Boughalleb-M’Hamdi N ◽  
◽  
...  

Background: Colletotrichum gloeosporioides is important plant pathogens on a wide range of plant hosts such as citrus causing pre- or post-harvest infections as anthracnose, post-bloom fruit drop, tearstain and stem-end rot on fruit, or wither-tip of twigs. Method: The optimization of growth conditions of this pathogen was performed (solid media, temperature, pH and water potential under laboratory experiments). Results: Our results revealed that the maximum radial growth of C. gloeosporioides was recorded on SDA medium. All isolates were able to grow on PDA at temperatures of 15 and 30°C (over 0.7cm/day). Optimal growth radial was recorded at pH 5, 6, 7 and 8. Similar responses were obtained with both salt types, but, in general, C. gloeosporioides was more tolerant to KCl than NaCl. Conclusion: Studies of cultural, morphological traits of the pathogen are prominent to understand the response of the pathogen in different environmental and nutritional conditions.


2018 ◽  
Vol 13 (2) ◽  
pp. 73-78 ◽  
Author(s):  
Surtinah Surtinah ◽  
Seprita Lidar

Research conducted an experiment using a completely randomized design environment with four replications, and the design of treatment used is six varieties of sweet corn. Analysis of data using polynomial regression, the parameters measured were plant height, leaf number, leaf length, leaf width, and sugar beans, followed by analyzing the relationship between the growth of plants with a sugar content of sweet corn kernels. The results showed that leaf width gives a weak relationship to the sugar content of sweet corn seed, and leaf length, number of leaves and plant height had a close relationship to the sugar content of sweet corn kernels.


2018 ◽  
Vol 15 (1) ◽  
pp. 35-41
Author(s):  
SAHINDAH ARITONANG ◽  
SURTINAH SURTINAH

The experiment was conducted experimentally using non-factorial Randomized Design (RAL) with 5 (five) treatment levels without Bioto Grow Gold, Bioto Grow Gold 1 ml liter-1 water, Bioto Grow Gold 2 ml liter -1 water, giving Bioto Grow Gold 3 ml liter-1 water and giving Bioto Grow Gold 4 ml liter-1 water. The data analysis used variance and continued with a different test of Duncan treatment average at p 0.05. The results showed that BGG treatment had the significant effect on leaf length, leaf width, stem diameter, flowering age, fruit circumference, fruit weight, a thickness of flesh and sugar content of melon fruit. The best treatment is giving Bioto Grow Gold 3 ml liter-1 water.


2016 ◽  
Vol 17 (1) ◽  
pp. 12 ◽  
Author(s):  
Tintin Suhartini ◽  
NFN Hadiatmi

<p>Morphological Characteristics Variability of Arrowroot (Marantha arundinaceae L.). The arrowroot has been recognized by most society member of Indonesia as a source of potential foodstuf. The arrowroot has low glicemic index, and high carbohydrate content, high quality of flour and can replace position of wheat flour as food material and industry. Evaluation and characterization are needed to get informations of superior characteristic of arrowroot as source of genetic variability to develop promising new arrowroot varieties. The result showed that the morphological characteristic of 20 arrowroot accecions were not different on the qualitative characteristics. The characteristics of leaf colour, stem and stalk leaf colour, and white colour of tuber were not different among arrowroot accecions. The quantitative characteristics of tuber or rhizomes type (tuber length and tuber circle), plant height, number of tiller/hill, total leaf/main stem, leaf length and leaf width among accecions had low variability. The tuber weight per hill had positive correlation with plant height, number of leaf, tuber length and tuber circle and negative correlation with leaf length, leaf width and stalk length leaf.</p><p> </p><p><strong>Abstrak</strong></p><p>Garut (Marantha arundinaceae L.) merupakan sumber pangan yang potensial bagi sebagian masyarakat di Indonesia. Garut memiliki indeks glikemik rendah dan kandungan karbohidrat tinggi. Tepung garut dapat menggantikan terigu sebagai bahan makanan dan industri. Evaluasi dan karakterisasi garut perlu dilakukan untuk memperoleh informasi sifat-sifat unggul untuk dapat digunakan dalam perakitan varietas unggul. Hasil evaluasi 20 aksesi garut yang dikarakterisasi menunjukan tidak ada perbedaan morfologis sifat kualitatif. Warna daun, pelepah dan tangkai daun, bentuk daun, bentuk dan warna umbi memiliki kesamaan antaraksesi. Karakter kuantitatif pada bentuk umbi (panjang dan lingkar umbi), tinggi tanaman, jumlah anakan/rumpun, jumlah daun pada batang utama, panjang dan lebar daun antar aksesi plasma nutfah garut memiliki keragaman yang sempit. Hasil analisis menunjukkan bahwa bobot umbi per rumpun berkorelasi positif dengan tinggi tanaman, jumlah daun, panjang, lingkar umbi, dan berkorelasi negatif dengan panjang daun, lebar daun, dan panjang tangkai daun.</p>


2020 ◽  
Vol 19 (1) ◽  
pp. 46-59
Author(s):  
V. I. ALAJE ◽  
C. O. ALAKE

African pear fruit (Dacryodes edulis) is a highly sought for multipurpose agroforestry tree species that has the potential for both local and international trades, Nigeria is among the leading producer of the fruit, but its pattern and extent of its genetic variability is currently unknown. Hence, a study was carried out to determine the pattern and extent of genetic variability and interrelationships among 13 morphological traits of African pear fruit accessions. The experiment was laid in a Completely Randomized Design in 5 replications. Data collected on number of leaf production, leaf length,  leaf breadth,  leaf length/breadth ratio,  internode distances, plant height, collar diameter, fresh leaf weight, fresh stem weight, fresh root weight, dry leaf weight, dry stem weight, dry root weight and  biomass accumulation were subjected to Analysis of Variance. Treatment means were separated using Duncan’s Multiple Range Test at 5% probability level. Results showed significant (p<0.05) differences among the D. edulis genotypes for most of the traits evaluated  indicated variation in the performance of the genotypes and  pattern of clustering indicated that there was no association between eco-geographical distribution of genotypes and genetic diversity. PCA revealed that fourteen axes accounted for 100% of the variations observed while the first five axes contributed 73.23% of the total variation observed. The first axis accounted for 25.61% of the total variation while the second and third accounted for 15.43 and 15.01%, respectively. The fourth axis contributed 9.82% of the total variation while the fifth axis contributed 7.36% of the total variation. Significant phenotypic and genotypic correlations were observed between most of the plant characters evaluated and biomass accumulation  which is an indication that the phenotypic association will be a good index for the genotypic association.  


2008 ◽  
Vol 133 (3) ◽  
pp. 396-407 ◽  
Author(s):  
John R. Stommel ◽  
Robert J. Griesbach

Considerable diversity exists in Capsicum L. germplasm for fruit and leaf shape, size, and color as well as plant habit. Using F1, F2, and backcross generations developed from diverse parental stocks, this report describes the inheritance patterns and relationships between unique foliar characters and diverse fruit and plant habit attributes. Our results demonstrate that pepper fruit color, shape, and fruit per cluster were simply inherited with modifying gene action. Broad-sense heritability for fruit color and shape and fruit per cluster was high, whereas narrow-sense heritability for these characters was moderate to low. Although fruit clustering was simply inherited, the number of fruit per cluster exhibited a quantitative mode of inheritance. High fruit counts per cluster were linked with red fruit color and anthocyanin pigmented foliage. Fruit shape was linked with immature fruit color and inherited independently of mature fruit color. Leaf color, length, and plant height were quantitatively inherited. Leaf shape did not vary, but leaf length varied and was positively correlated with leaf width. Broad-sense heritability for leaf characters, including leaf length, leaf width, and leaf color, was high. With the exception of leaf width, which exhibited low narrow-sense heritability, high narrow-sense heritability for leaf characters denoted additive gene action. Plant height displayed high broad-sense heritability. Moderate narrow-sense heritability suggested that additive effects also influence plant height. Analysis of segregating populations demonstrated that red and orange fruit color can be combined with all possible leaf colors from green to black. These results provide new data to clarify and extend available information on the inheritance of Capsicum fruit attributes and provide new information on the genetic control of leaf characters and plant habit.


2016 ◽  
Vol 64 (1) ◽  
pp. 32 ◽  
Author(s):  
Madalena Vaz Monteiro ◽  
Tijana Blanuša ◽  
Anne Verhoef ◽  
Paul Hadley ◽  
Ross W. F. Cameron

Urban greening solutions such as green roofs help improve residents’ thermal comfort and building insulation. However, not all plants provide the same level of cooling. This is partially due to differences in plant structure and function, including different mechanisms that plants employ to regulate leaf temperature. Ranking of multiple leaf and plant traits involved in the regulation of leaf temperature (and, consequently, plants’ cooling ‘service’) is not well understood. We, therefore, investigated the relative importance of water loss, leaf colour, thickness and extent of pubescence for the regulation of leaf temperature, in the context of species for semi-extensive green roofs. Leaf temperature was measured with an infrared imaging camera in a range of contrasting genotypes within three plant genera (Heuchera, Salvia and Sempervivum). In three glasshouse experiments (each evaluating three or four genotypes of each genus), we varied water availability to the plants and assessed how leaf temperature altered depending on water loss and specific leaf traits. Greatest reductions in leaf temperature were closely associated with higher water loss. Additionally, in non-succulents (Heuchera, Salvia), lighter leaf colour and longer hair length (on pubescent leaves) both contributed to reduced leaf temperature. However, in succulent Sempervivum, colour and pubescence made no significant contribution; leaf thickness and rate of water loss were the key regulating factors. We propose that this can lead to different plant types having significantly different potentials for cooling. We suggest that maintaining transpirational water loss by sustainable irrigation and selecting urban plants with favourable morphological traits are the key to maximising thermal benefits provided by applications such as green roofs.


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