functional capacities
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2022 ◽  
Author(s):  
Jamie A MacLaren ◽  
Rebecca F Bennion ◽  
Nathalie Bardet ◽  
Valentin Fischer

Mosasaurid squamates were the dominant amniote predators in marine ecosystems during most of the Late Cretaceous. Evidence from multiple sites worldwide of a global mosasaurid community restructuring across the Campanian-Maastrichtian transition may have wide-ranging implications for the evolution of diversity of these top oceanic predators. In this study, we use a suite of biomechanical traits and functionally descriptive ratios to investigate how the morphofunctional disparity of mosasaurids evolved through time and space prior to the Cretaceous-Palaeogene (K/Pg) mass extinction. Our results suggest that the worldwide taxonomic turnover in mosasaurid community composition from Campanian to Maastrichtian is reflected by a notable increase in morphofunctional disparity on a global scale, but especially driven the North American record. Ecomorphospace occupation becomes more polarised during the late Maastrichtian, as the morphofunctional disparity of mosasaurids plateaus in the Southern Hemisphere and decreases in the Northern Hemisphere. We show that these changes are not associated with strong modifications in mosasaurid size, but rather with the functional capacities of their skulls, and that mosasaurid morphofunctional disparity was in decline in several provincial communities before the K/Pg mass extinction. Our study highlights region-specific patterns of disparity evolution, and the importance of assessing vertebrate extinctions both globally and regionally. Ecomorphological differentiation in mosasaurid communities, coupled with declines in other formerly abundant marine reptile groups, indicates widespread restructuring of higher trophic levels in marine food webs was well underway when the K-Pg mass extinction took place.


2021 ◽  
pp. 1-15
Author(s):  
Pierre Reynard ◽  
Josée Lagacé ◽  
Charles-Alexandre Joly ◽  
Léon Dodelé ◽  
Evelyne Veuillet ◽  
...  

<b><i>Background:</i></b> Difficulty understanding speech in background noise is the reason of consultation for most people who seek help for their hearing. With the increased use of speech-in-noise (SpIN) testing, audiologists and otologists are expected to evidence disabilities in a greater number of patients with sensorineural hearing loss. The purpose of this study is to list validated available SpIN tests for the French-speaking population. <b><i>Summary:</i></b> A review was conducted according to Preferred Reporting Items for Systematic Reviews and Meta-Analyses guidelines. PubMed and Scopus databases were searched. Search strategies used a combination of 4 keywords: speech, audiometry, noise, and French. There were 10 validated SpIN tests dedicated to the Francophone adult population at the time of the review. Some tests use digits triplets as speech stimuli and were originally designed for hearing screening. The others were given a broader range of indications covering diagnostic or research purposes, determination of functional capacities and fitness for duty, as well as assessment of hearing amplification benefit. <b><i>Key Messages:</i></b> As there is a SpIN test for almost any type of clinical or rehabilitation needs, both the accuracy and duration should be considered for choosing one or the other. In an effort to meet the needs of a rapidly aging population, fast adaptive procedures can be favored to screen large groups in order to limit the risk of ignoring the early signs of forthcoming presbycusis and to provide appropriate audiological counseling.


2021 ◽  
Author(s):  
Sergio Triana ◽  
Dominik Vonficht ◽  
Lea Jopp-Saile ◽  
Simon Raffel ◽  
Raphael Lutz ◽  
...  

AbstractSingle-cell genomics technology has transformed our understanding of complex cellular systems. However, excessive cost and a lack of strategies for the purification of newly identified cell types impede their functional characterization and large-scale profiling. Here, we have generated high-content single-cell proteo-genomic reference maps of human blood and bone marrow that quantitatively link the expression of up to 197 surface markers to cellular identities and biological processes across all main hematopoietic cell types in healthy aging and leukemia. These reference maps enable the automatic design of cost-effective high-throughput cytometry schemes that outperform state-of-the-art approaches, accurately reflect complex topologies of cellular systems and permit the purification of precisely defined cell states. The systematic integration of cytometry and proteo-genomic data enables the functional capacities of precisely mapped cell states to be measured at the single-cell level. Our study serves as an accessible resource and paves the way for a data-driven era in cytometry.


2021 ◽  
Author(s):  
Jianqing Wu

After examining both the substantive evidence and approval process used by FDA’s in approving the mRAN vaccines, I showed that due to routine suppression of critical discoveries by leading medical publishers and limitations in FDA’s approval process, FDA could consider only flawed and self-serving findings in context of flawed medical theories in favor of the approval. As reflected in the brief for FDA advisory committee, FDA did not consider fatal flaws in clinical trials, the symptom-based research methods, interference affects of many factors on vaccine benefits/risks, and potential long-term side effects. While off-target expression of mRNA vaccines were known evils in mRNA vaccines, FDA did not consider. It did not address three critical problems responsible for erratic expression: coating variations among mRAN molecules, differences in local hydrodynamic properties in each person, and the massive differences in influencing variables among different persons. By relying on cherry-picked, self-servicing, and deeply flawed application data and flawed contextual knowledge promoted by leading medical publishers, FDA would not see plainly predictable acute personal injuries and expected latent side effects on some people and missed obvious dangers to fetuses, babies, and people with diminished vital functional capacities. Given the fact that the vaccines are imposed on the population, defectiveness of the vaccines can cause the worst catastrophes, FDA must change its review process to overcome biases and suppression practiced by vaccines sponsors and leading medical journals. A workable process must include proactively seeking and considering any relevant information from any source and conducting expanded analysis without being constrained by flawed research models. By using an improved review process, FDA could not have found that mRNA vaccines are effective and safe. I urge FDA to re-valuate mRNA use licenses for the sake of billions of human beings.


2021 ◽  
Vol 11 (5) ◽  
pp. 557-563
Author(s):  
Saker Besma ◽  
Chaib Rachid ◽  
Kahlouche Abdelaziz

The development of industry, continuous innovation and shortening production times and demands from customers to deliver products in the right quantities, at the right time, at the right price and with better quality have led to increased competitive pressures. These visions have created risks and disruptions in the supply chain. This could compromise the achievement of the targeted objectives as well as the continuity of the operating cycle, or even the sustainability of the company. Consequently, it is recommended to identify, upstream, any incident having an impact on the company's functional capacities. It is only by controlling these risks that manufacturers can guarantee the smooth running of their logistics activities, the objective of this work. This work is clearly based on the identification and evaluation of risks in an emerging economy through a qualitative approach based on interviews and a questionnaire with purchasing and distribution managers. The results displayed allow managers to refocus on the priorities to be solved in order to design viable and livable organizations, or even to act effectively to correct the errors that have been revealed or to continue and increase its development. As a case study we chose the pharmaceutical sector in the Constantine region. This is the first time this type of study has been done in Algeria.


2021 ◽  
Vol 12 ◽  
Author(s):  
Hao Fu ◽  
Maozhang He ◽  
Jinyuan Wu ◽  
Yunyan Zhou ◽  
Shanlin Ke ◽  
...  

Parturition is a crucial event in the sow reproduction cycle, which accompanies by a series of physiological changes, including sex hormones, metabolism, and immunity. More and more studies have indicated the changes of the gut microbiota from pregnancy to parturition. However, what bacterial species and functional capacities of the gut microbiome are changed around parturition has been largely unknown, and the correlations between the changes of gut bacterial species and host metabolome were also uncovered. In this study, by combining 16S rRNA gene and shotgun metagenomic sequencing data, and the profiles of serum metabolome and fecal short-chain fatty acids (SCFAs), we investigated the changes of gut microbiome, serum metabolite features and fecal SCFAs from late pregnancy (LP) to postpartum (PO) stage. We found the significant changes of gut microbiota from LP to PO stage in both 16S rRNA gene sequencing and metagenomic sequencing analyses. The bacterial species from Lactobacillus, Streptococcus, and Clostridium were enriched at the LP stage, while the species from Bacteroides, Escherichia, and Campylobacter had higher abundances at the PO stage. Functional capacities of the gut microbiome were also significantly changed and associated with the shifts of gut bacteria. Untargeted metabolomic analyses revealed that the metabolite features related to taurine and hypotaurine metabolism, and arginine biosynthesis and metabolism were enriched at the LP stage, and positively associated with those bacterial species enriched at the LP stage, while the metabolite features associated with vitamin B6 and glycerophospholipid metabolism had higher abundances at the PO stage and were positively correlated with the bacteria enriched at the PO stage. Six kinds of SCFAs were measured in feces samples and showed higher concentrations at the LP stage. These results suggested that the changes of gut microbiome from LP to PO stage lead to the shifts of host lipid, amino acids and vitamin metabolism and SCFA production. The results from this study provided new insights for the changes of sow gut microbiome and host metabolism around parturition, and gave new knowledge for guiding the feeding and maternal care of sows from late pregnancy to lactation in the pig industry.


2021 ◽  
Vol 21 (1) ◽  
Author(s):  
Alexander Eng ◽  
Hillary S. Hayden ◽  
Christopher E. Pope ◽  
Mitchell J. Brittnacher ◽  
Anh T. Vo ◽  
...  

Abstract Background Infants with cystic fibrosis (CF) suffer from gastrointestinal (GI) complications, including pancreatic insufficiency and intestinal inflammation, which have been associated with impaired nutrition and growth. Recent evidence identified altered fecal microbiota taxonomic compositions in infants with CF relative to healthy infants that were characterized by differences in the abundances of taxa associated with GI health and nutrition. Furthermore, these taxonomic differences were more pronounced in low length infants with CF, suggesting a potential link to linear growth failure. We hypothesized that these differences would entail shifts in the microbiome’s functional capacities that could contribute to inflammation and nutritional failure in infants with CF. Results To test this hypothesis, we compared fecal microbial metagenomic content between healthy infants and infants with CF, supplemented with an analysis of fecal metabolomes in infants with CF. We identified notable differences in CF fecal microbial functional capacities, including metabolic and environmental response functions, compared to healthy infants that intensified during the first year of life. A machine learning-based longitudinal metagenomic age analysis of healthy and CF fecal metagenomic functional profiles further demonstrated that these differences are characterized by a CF-associated delay in the development of these functional capacities. Moreover, we found metagenomic differences in functions related to metabolism among infants with CF that were associated with diet and antibiotic exposure, and identified several taxa as potential drivers of these functional differences. An integrated metagenomic and metabolomic analysis further revealed that abundances of several fecal GI metabolites important for nutrient absorption, including three bile acids, correlated with specific microbes in infants with CF. Conclusions Our results highlight several metagenomic and metabolomic factors, including bile acids and other microbial metabolites, that may impact nutrition, growth, and GI health in infants with CF. These factors could serve as promising avenues for novel microbiome-based therapeutics to improve health outcomes in these infants.


Cells ◽  
2021 ◽  
Vol 10 (9) ◽  
pp. 2349
Author(s):  
Chih-Jung Chang ◽  
Jing Zhang ◽  
Yu-Ling Tsai ◽  
Chun-Bing Chen ◽  
Chun-Wei Lu ◽  
...  

The bacterial microbiota in the skin and intestine of patients with psoriasis were different compared with that of healthy individuals. However, the presence of a distinct blood microbiome in patients with psoriasis is yet to be investigated. In this study, we investigated the differences in bacterial communities in plasma-derived extracellular vesicles (EVs) between patients with moderate to severe psoriasis (PSOs) and healthy controls (HCs). The plasma EVs from the PSO (PASI > 10) (n = 20) and HC (n = 8) groups were obtained via a series of centrifugations, and patterns were examined and confirmed using transmission electron microscopy (TEM) and EV-specific markers. The taxonomic composition of the microbiota was determined by using full-length 16S ribosomal RNA gene sequencing. The PSO group had lower bacterial diversity and richness compared with HC group. Principal coordinate analysis (PCoA)-based clustering was used to assess diversity and validated dysbiosis for both groups. Differences at the level of amplicon sequence variant (ASV) were observed, suggesting alterations in specific ASVs according to health conditions. The HC group had higher levels of the phylum Firmicutes and Fusobacteria than in the PSO group. The order Lactobacillales, family Brucellaceae, genera Streptococcus, and species Kingella oralis and Aquabacterium parvum were highly abundant in the HC group compared with the PSO group. Conversely, the order Bacillales and the genera Staphylococcus and Sphihgomonas, as well as Ralstonia insidiosa, were more abundant in the PSO group. We further predicted the microbiota functional capacities, which revealed significant differences between the PSO and HC groups. In addition to previous studies on microbiome changes in the skin and gut, we demonstrated compositional differences in the microbe-derived EVs in the plasma of PSO patients. Plasma EVs could be an indicator for assessing the composition of the microbiome of PSO patients.


2021 ◽  
Vol 36 (6) ◽  
pp. 1052-1052
Author(s):  
Danielle R Hardesty ◽  
Carmen Chek ◽  
Michael Persin ◽  
Emma Barr ◽  
Hannah Sasser ◽  
...  

Abstract Background/Problem Neuropsychologists are often asked to evaluate patients’ functional capacities, yet traditional neuropsychological tests have limited correspondence with real-world outcomes. The Virtual Environment Grocery store (VEGS) is a virtual environment that stimulates shopping tasks. Previous research has found support for the construct validity of the VEGS among older adults (Parsons & Barnett, 2017); however, no extant research has examined relationships between the VEGS and adaptive functioning among older adults. Method Older adults (n = 30; age 43–90 M = 77.09, SD = 12.94) were administered the Virtual Reality Grocery Store (VEGS) and the Texas Functional Living Scale (TFLS) and completed the Instruments of Daily Activities (IADLS) Questionnaire. Results VEGS variables explained 39.6% of the variance in self-reported adaptive functioning (I, e., the IADLS) and 60.0% of the variance in performance-based adaptive functioning (i.e., the TFLS). Conclusion These results suggest that the VEGS is a predictor of adaptive functioning – particularly when measured with a performance-based measure – among older adults.


2021 ◽  
Vol 12 ◽  
Author(s):  
Jia Zhang ◽  
Min Liu ◽  
Shanlin Ke ◽  
Xiaochang Huang ◽  
Shaoming Fang ◽  
...  

More and more studies have indicated that gut microbiota takes part in the biosynthesis and metabolism of sex hormones. Inversely, sex hormones influence the composition of gut microbiota. However, whether microbiota in the gut and vagina is associated with estrus return of weaning sows is largely unknown. Here, using 16S rRNA gene sequencing in 158 fecal and 50 vaginal samples, we reported the shifts in the gut and vaginal microbiota between normal return and non-return sows. In fecal samples, Lactobacillus and S24-7 were enriched in normal return sows, while Streptococcus luteciae, Lachnospiraceae, Clostridium, and Mogibacterium had higher abundance in non-return sows. In vaginal swabs, the operational taxonomic units (OTUs) annotated to Clostridiales, Ruminoccaceae, and Oscillospira were enriched in normal return sows, while those OTUs annotated to Campylobacter, Anaerococcus, Parvimonas, Finegoldia, and Dorea had higher abundances in non-return sows. Co-abundance group (CAG) analysis repeated the identification of the bacterial taxa associated with the estrus return of weaning sows. The predicted functional capacities in both gut and vaginal microbiome were changed between normal return and non-return sows. Serum metabolome profiles were determined by non-targeted metabolome analysis in seven normal return and six non-return sows. The metabolite features having higher abundance in normal return sows were enriched in the pathways Steroid hormone biosynthesis, Starch and sucrose metabolism, Galactose metabolism, and Vitamin B6 metabolism, while the metabolite features belonging to organic acids and derivatives, indoles and derivatives, sulfoxides, and lignans and neolignans had significantly higher abundance in non-return sows. Correlation analysis found that the changes in gut microbiota were associated with the shifts of serum metabolites and suggested that certain bacteria might affect estrus return of weaning sow through serum metabolites. These findings may provide new insights for understanding the role of the gut and vaginal microbiota in sow return to estrus after weaning.


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