High seroprevalence of SARS-CoV-2 in white-tailed deer (Odocoileus virginianus) at one of three captive cervid facilities in Texas

Free-ranging white-tailed deer (Odocoileus virginanus) across the United States are increasingly recognized as involved in SARS-CoV-2 transmission cycles. Through a cross-sectional study of 80 deer at three captive cervid facilities in central and southern Texas, we provide evidence of 34 of 36 (94.4%) white-tailed deer at a single captive cervid facility seropositive for SARS-CoV-2 by neutralization assay (PRNT90), with endpoint titers as high as 1280. In contrast, all tested white-tailed deer and axis deer (Axis axis) at two other captive cervid facilities were seronegative, and SARS-CoV-2 RNA was not detected in respiratory swabs from deer at any of the three facilities. These data support transmission among captive deer that cannot be explained by human contact for each infected animal, as only a subset of the seropositive does had direct human contact. The facility seroprevalence was more than double of that reported from wild deer, suggesting that the confined environment may facilitate transmission. Further exploration of captive cervids and other managed animals for their role in the epizootiology of SARS-CoV-2 is critical for understanding impacts on animal health and the potential for spillback transmission to humans or other animal taxa.

Channel Capacity of Molecular Signaling via Diffusion in Confined Microenvironment

Aims: To model molecular signal propagation in confined environment. Background: Molecular communication (MC) is rooted in the concepts of understanding, modeling, and engineering information exchange among naturally and artificially synthesized nanosystems. To develop or analyze an MC system, there is the need to model the communication channel through which the molecular signal diffuse, from the transmitter to the receiver. Many models for the diffusion-based MC channel have been proposed in the literature for evaluating the performance of MC systems. Most of the contemporary works assume, and rightly so for some scenarios, that the MC channels under consideration have infinite boundaries. However, this assumption becomes invalid in bounded domains such as the interiors of natural cells and artificially synthesized nanosystems. Objective: In this paper, the model of molecular propagation in a confined. microenvironment is employ to explore the effect of such an environment on the MC system. Method: The mutual information of the channel and specifically the closed-form expression of the channel capacity of the molecular signaling in the confined geometry is derive. Result: Numerical results showing the variation in the channel capacity as the function of the channel dimension are presented. Conclusion: Results showed that the channel capacity increases with the decrease in the channel dimension. Subsequently, as the dimension of the channel tends to the nanoscale range typical of many artificially synthesized nanosystems, the effect of the channel width on the capacity and by induction on many other system metrics increases.

Petrographic Record and Conditions of Expansive Hydration of Anhydrite in the Recent Weathering Zone at the Abandoned Dingwall Gypsum Quarry, Nova Scotia, Canada

In the Dingwall gypsum quarry in Nova Scotia, Canada, operating in 1933–1955, the bedrock anhydrite deposits of the Carboniferous Windsor Group have been uncovered from beneath the secondary gypsum beds of the extracted raw material. The anhydrite has been subjected to weathering undergoing hydration (gypsification), transforming into secondary gypsum due to contact with water of meteoric derivation. The ongoing gypsification is associated with a volume increase and deformation of the quarry bottom. The surface layer of the rocks is locally split from the substrate and raised, forming spectacular hydration relief. It shows numerous domes, ridges and tepee structures with empty internal chambers, some of which represent unique hydration caves (swelling caves, Quellungshöhlen). The petrographic structure of the weathering zone has been revealed by macro- and microscopic observations. It was recognized that gypsification commonly starts from a developing network of tiny fractures penetrating massive anhydrite. The gypsification advances from the fractures towards the interior of the anhydrite rocks, which are subdivided into blocks or nodules similar to corestones. Characteristic zones can be recognized at the contact of the anhydrite and the secondary gypsum: (1) massive and/or microporous anhydrite, (2) anhydrite penetrated by tiny gypsum veinlets separating the disturbed crystals and their fragments (commonly along cleavage planes), (3) gypsum with scattered anhydrite relics, and (4) secondary gypsum. The secondary gypsum crystals grow both by replacement and displacement, and also as cement. Displacive growth, evidenced by abundant deformation of the fragmented anhydrite crystals, is the direct cause of the volume increase. Crystallization pressure exerted by gypsum growth is thought to be the main factor generating volume increase and, consequently, also the formation of new fractures allowing water access to “fresh” massive anhydrite and thus accelerating its further hydration. The expansive hydration is taking place within temperature range from 0 to ~30 °C in which the solubility of gypsum is lower than that of anhydrite. In such conditions, dissolving anhydrite yields a solution supersaturated with gypsum and the dissolution of anhydrite is simultaneous with in situ replacive gypsum crystallization. Accompanying displacive growth leads to volume increase in the poorly confined environment of the weathering zone that is susceptible to upward expansion.

Thermodynamic and Kinetic Description of the Main Effects Related to the Memory Effect during Carbon Dioxide Hydrates Formation in a Confined Environment

This article consists of an experimental description about how the memory effect intervenes on hydrates formation. In particular, carbon dioxide hydrates were formed in a lab–scale apparatus and in presence of demineralized water and a pure quartz porous medium. The same gas-water mixture was used. Half of experiments was carried out in order to ensure that the system retained memory of previous processes, while in the other half, such effect was completely avoided. Experiments were characterized thermodynamically and kinetically. The local conditions, required for hydrates formation, were compared with those of equilibrium. Moreover, the time needed for the process completion and the rate constant trend over time, were defined. The study of these parameters, together with the observation that hydrates formation was quantitatively similar in both types of experiments, allowed to conclude that the memory effect mainly acted as kinetic promoter for carbon dioxide hydrates formation.

Analysis of Ficus hirta Fig Endosymbionts Diversity and Species Composition

Endosymbionts living in plants and insects are pervasive. Ficus (Moraceae) has very special inflorescences (which we also call figs) enclosed like an urn, and such inflorescence is usually parasitized by fig wasps. Ficus breeds fig wasp larvae in its figs and adult fig wasps pollinate for Ficus, Ficus and its obligated pollinator formed fig-fig wasp mutualism. Previous studies have found that this confined environment in figs may have provided protection for fig wasps and that this has left some imprints on the genome of fig wasps during the coevolution history of figs and fig wasps. Research on the diversity of both bacteria and fungi in figs are fewer. Our study explored the diversity of endosymbionts in Ficus hirta figs. We utilized high-throughput sequencing and biological database to identify the specific microorganism in figs, then conducted microorganism communities’ diversity analysis and function annotation analysis. As a result, we identified the dominant endosymbionts in figs, mainly some insect internal parasitic bacteria and fungi, plant pathogen, endophytes, and saprotroph. Then we also found bacteria in Ficus hirta figs were more diversified than fungi, and bacteria communities in female figs and functional male figs were different. These findings may give us more insight into the coevolution and interaction among endosymbiont, fig, and fig wasp.

Spatiotemporal dynamics of nanowire growth in a microfluidic reactor

Co-integration of nanomaterials into microdevices poses several technological challenges and presents numerous scientific opportunities that have been addressed in this paper by integrating zinc oxide nanowires (ZnO-NWs) into a microfluidic chamber. In addition to the applications of these combined materials, this work focuses on the study of the growth dynamics and uniformity of nanomaterials in a tiny microfluidic reactor environment. A unique experimental platform was built through the integration of a noninvasive optical characterization technique with the microfluidic reactor. This platform allowed the unprecedented demonstration of time-resolved and spatially resolved monitoring of the in situ growth of NWs, in which the chemicals were continuously fed into the microfluidic reactor. The platform was also used to assess the uniformity of NWs grown quickly in a 10-mm-wide microchamber, which was intentionally chosen to be 20 times wider than those used in previous attempts because it can accommodate applications requiring a large surface of interaction while still taking advantage of submillimeter height. Further observations included the effects of varying the flow rate on the NW diameter and length in addition to a synergetic effect of continuous renewal of the growth solution and the confined environment of the chemical reaction.

Nonlinear flight physics of the Lie Bracket roll mechanism

In this paper, we review the concept of Lie brackets and how it can be exploited in generating motion in unactuated directions through nonlinear interactions between two or more control inputs. Applying this technique to the airplane flight dynamics near stall, a new rolling mechanism is discovered through nonlinear interactions between the elevator and the aileron control inputs. This mechanism, referred to as the Lie Bracket Roll Augmentation (LIBRA) mechanism, possesses a significantly higher roll control authority near stall compared to the conventional roll mechanism using ailerons only; it produces more than an order-of-magnitude stronger roll motion over the first second. The main contribution of this paper is to study the nonlinear flight physics that lead to this superior performance of the LIBRA mechanism. In fact, the LIBRA performance in free flight (six DOF) is double that in a confined environment of two-DOF roll-pitch dynamics. The natural feedback from the airplane motion (roll, yaw, and sideslip) into the LIBRA mechanism boosts its performance through interesting nonlinear interplay between roll and yaw, while exploiting some of the changes in the airplane characteristics near stall.

Analysis of Changes in Spectral Signal According to Gas Flow Rate in Laser-Induced Breakdown Spectroscopy

In a laser-induced breakdown spectroscopy (LIBS) system that performs elemental analysis of a target by acquiring the emission of plasma generated on the material surface by a focused laser, the plasma signal may be affected by the flow of the surrounding gas. A flow of gas may be present when LIBS measurements are performed in a special environment where an inert gas is normally applied. In such an environment, the flow of gas may affect the intensity of emission generated in plasma. The LIBS spectral intensity in the gas flow field changes according to the direction of the gas flow and the signal detector of the LIBS. In this case, the correlation between the flow rate and intensity of the spectral line can be confirmed both theoretically and experimentally. In this study, changes in the signal according to the flow rate were theoretically evaluated using the view factor and wave equation. In addition, LIBS signals were examined based on the flow of Ar, N2, and He gases in the experiment. The experimental results confirmed the range of effective gas flow rates over which the correlation between the flow rate and intensity of the LIBS spectral line could be inferred. These results could be used for calibration to achieve accurate measurement of LIBS signals in gas flow fields. In addition, this analysis has the potential to shed light on the properties of flowing gases that affect plasma by reversibly tracking changes in the signal of LIBS in a confined environment.