Nitrogen in plants: from nutrition to the modulation of abiotic stress adaptation

Nitrogen is one of the most important nutrient for plant growth and development; it is strongly associated with a variety of abiotic stress responses. As sessile organisms, plants have evolved to develop efficient strategies to manage N to support growth when exposed to a diverse range of stressors. This review summarizes the recent progress in the field of plant nitrate (NO3-) and ammonium (NH4+) uptake, which are the two major forms of N that are absorbed by plants. We explore the intricate relationship between NO3-/NH4+ and abiotic stress responses in plants, focusing on stresses from nutrient deficiencies, unfavorable pH, ions, and drought. Although many molecular details remain unclear, research has revealed a number of core signaling regulators that are associated with N-mediated abiotic stress responses. An in-depth understanding and exploration of the molecular processes that underpin the interactions between N and abiotic stresses is useful in the design of effective strategies to improve crop growth, development, and productivity.

Multi-surveyor detection-mark-redetection as a powerful tool for butterfly population monitoring in the pre-imaginal stage

1. For many elusive insect species, which are difficult to cover by standard monitoring schemes, innovative monitoring methods are needed to gain robust data on population trends. We suggest a monitoring of overwintering larvae for the endangered nymphalid butterfly Limenitis reducta. 2. We tested one removal and three detection-mark-redetection (DMR) approaches in a field study in the “Alb-Donau” region, Germany. We replaced movement of the study organisms by random movement of multiple different surveyors, and we examined the model assumption of equal detectability using simulations. 3. Our results indicate that multi-surveyor removal/DMR techniques are suitable for estimating abundance of overwintering L. reducta larvae. Detection probabilities varied with surveyor experience and the uncertainty of population estimates increased with a decrease in personnel expenditure. Estimated larval densities on a spruce clear-cut ranged between one and three individuals per 100 m². 4. We suggest a detection-mark-redetection (DMR) approach with three trained surveyors for the monitoring of L. reducta populations in the pre-imaginal stage. Besides L. reducta, the proposed method is likely to be suitable for other insect taxa with specific immobile life-stages and some sessile organisms, e.g. corals, elusive plants, or fungi.

Challenges and Perspectives in the Epigenetics of Climate Change-Induced Forests Decline

Forest tree species are highly vulnerable to the effects of climate change. As sessile organisms with long generation times, their adaptation to a local changing environment may rely on epigenetic modifications when allele frequencies are not able to shift fast enough. However, the current lack of knowledge on this field is remarkable, due to many challenges that researchers face when studying this issue. Huge genome sizes, absence of reference genomes and annotation, and having to analyze huge amounts of data are among these difficulties, which limit the current ability to understand how climate change drives tree species epigenetic modifications. In spite of this challenging framework, some insights on the relationships among climate change-induced stress and epigenomics are coming. Advances in DNA sequencing technologies and an increasing number of studies dealing with this topic must boost our knowledge on tree adaptive capacity to changing environmental conditions. Here, we discuss challenges and perspectives in the epigenetics of climate change-induced forests decline, aiming to provide a general overview of the state of the art.

Managing the Product Quality of Vegetable Crops under Abiotic Stress

Plants, as sessile organisms, are continuously exposed to varying environmental conditions and often face abiotic and biotic threats [...]

Epigenetic Modifications in Plant Development and Reproduction

Plants are exposed to highly fluctuating effects of light, temperature, weather conditions, and many other environmental factors throughout their life. As sessile organisms, unlike animals, they are unable to escape, hide, or even change their position. Therefore, the growth and development of plants are largely determined by interaction with the external environment. The success of this interaction depends on the ability of the phenotype plasticity, which is largely determined by epigenetic regulation. In addition to how environmental factors can change the patterns of genes expression, epigenetic regulation determines how genetic expression changes during the differentiation of one cell type into another and how patterns of gene expression are passed from one cell to its descendants. Thus, one genome can generate many ‘epigenomes’. Epigenetic modifications acquire special significance during the formation of gametes and plant reproduction when epigenetic marks are eliminated during meiosis and early embryogenesis and later reappear. However, during asexual plant reproduction, when meiosis is absent or suspended, epigenetic modifications that have arisen in the parental sporophyte can be transmitted to the next clonal generation practically unchanged. In plants that reproduce sexually and asexually, epigenetic variability has different adaptive significance. In asexuals, epigenetic regulation is of particular importance for imparting plasticity to the phenotype when, apart from mutations, the genotype remains unchanged for many generations of individuals. Of particular interest is the question of the possibility of transferring acquired epigenetic memory to future generations and its potential role for natural selection and evolution. All these issues will be discussed to some extent in this review.

Current Knowledge on Mechanisms Preventing Photosynthesis Redox Imbalance in Plants

Photosynthesis includes a set of redox reactions that are the source of reducing power and energy for the assimilation of inorganic carbon, nitrogen and sulphur, thus generating organic compounds, and oxygen, which supports life on Earth. As sessile organisms, plants have to face continuous changes in environmental conditions and need to adjust the photosynthetic electron transport to prevent the accumulation of damaging oxygen by-products. The balance between photosynthetic cyclic and linear electron flows allows for the maintenance of a proper NADPH/ATP ratio that is adapted to the plant’s needs. In addition, different mechanisms to dissipate excess energy operate in plants to protect and optimise photosynthesis under adverse conditions. Recent reports show an important role of redox-based dithiol–disulphide interchanges, mediated both by classical and atypical chloroplast thioredoxins (TRXs), in the control of these photoprotective mechanisms. Moreover, membrane-anchored TRX-like proteins, such as HCF164, which transfer electrons from stromal TRXs to the thylakoid lumen, play a key role in the regulation of lumenal targets depending on the stromal redox poise. Interestingly, not all photoprotective players were reported to be under the control of TRXs. In this review, we discuss recent findings regarding the mechanisms that allow an appropriate electron flux to avoid the detrimental consequences of photosynthesis redox imbalances.

Enhanced Weathering and Erosion of a Cohesive Shore Platform Following the Experimental Removal of Mussels

The organisms inhabiting intertidal platforms can affect their weathering and erosion rates. Research on biotic influences on platform integrity has traditionally emphasized the role of bioeroders (i.e., organisms that scrap or bore into platforms via mechanical and chemical means). Yet, recent studies illustrate that covers of sessile organisms on the surfaces of intertidal platforms can have bioprotective effects by reducing the efficacy of physical weathering and erosion agents. Eroding cliffs fronted by cohesive shore platforms are a pervasive feature along the continental Argentinean coastline (37–52°S). In this study, we investigated how mussel (Brachidontes rodriguezii) cover mediates weathering and erosion of a cohesive, consolidated silt platform at Playa Copacabana (5 km north of Miramar, Buenos Aires Province; 38° 14′ S, 57° 46′ W). By means of mussel removal experiments, we found that mussel cover attenuates variations in platform surface temperatures, enhances moisture retention during low tide, reduces rates of salt crystallization within the pores of the platform material, and attenuates hydrodynamic forcing on the platform surface. Mussel removal also led to a 10% decrease in surface hardness and a 2-mm reduction in platform height after 5 months. Collectively, our findings indicate that mussel beds limit substrate breakdown via heating-cooling, wetting-drying, and salt crystallization and provide some of the first experimental field evidence for the direct impacts of biotic cover on platform erosion. As intertidal platforms protect the cliffs behind from the hydraulic impact of waves, which may be enhanced with future sea-level rise, we posit that the protection of platforms by mussels indirectly moderates coastline retreat, especially on soft cohesive shores.

Habitat Complexity Affects the Structure but Not the Diversity of Sessile Communities on Tropical Coastal Infrastructure

Increasing human population, urbanisation, and climate change have resulted in the proliferation of hard coastal infrastructure such as seawalls and breakwaters. There is increasing impetus to create multifunctional coastal defence structures with the primary function of protecting people and property in addition to providing habitat for marine organisms through eco-engineering - a nature-based solutions approach. In this study, the independent and synergistic effects of physical complexity and seeding with native oysters in promoting diversity and abundances of sessile organisms were assessed at two locations on Penang Island, Malaysia. Concrete tiles with varying physical and biological complexity (flat, 2.5 cm ridges and crevices, and 5 cm ridges and crevices that were seeded or unseeded with oysters) were deployed and monitored over 12 months. The survival of the seeded oysters was not correlated with physical complexity. The addition of physical and biological complexity interacted to promote distinct community assemblages, but did not consistently increase the richness, diversity, or abundances of sessile organisms through time. These results indicate that complexity, whether physical or biological, is only one of many influences on biodiversity on coastal infrastructure. Eco-engineering interventions that have been reported to be effective in other regions may not work as effectively in others due to the highly dynamic conditions in coastal environment. Thus, it is important that other factors such as the local species pools, environmental setting (e.g., wave action), biological factors (e.g., predators), and anthropogenic stressors (e.g., pollution) should also be considered when designing habitat enhancements. Such factors acting individually or synergistically could potentially affect the outcomes of any planned eco-engineering interventions.

The TPR- and J-domain-containing proteins DJC31 and DJC62 are involved in abiotic stress responses in Arabidopsis thaliana

ABSTRACT Molecular chaperones play an important role during the response to different stresses. Since plants are sessile organisms, they need to be able to adapt quickly to different conditions. To do so, plants possess a complex chaperone machinery, composed of HSP70, HSP90, J proteins and other factors. In this study we characterized DJC31 (also known as TPR16) and DJC62 (also known as TPR15) of Arabidopsis thaliana, two J proteins that additionally carry clamp-type tetratricopeptide repeat domains. Using cell fractionation and split GFP, we could show that both proteins are attached to the cytosolic side of the endoplasmic reticulum membrane. Moreover, an interaction with cytosolic HSP70.1 and HSP90.2 could be shown using bimolecular fluorescence complementation. Knockout of both DJC31 and DJC62 caused severe defects in growth and development, which affected almost all organs. Furthermore, it could be shown that the double mutant is more sensitive to osmotic stress and treatment with abscisic acid, but surprisingly exhibited enhanced tolerance to drought. Taken together, these findings indicate that DJC31 and DJC62 might act as important regulators of chaperone-dependent signaling pathways involved in plant development and stress responses.