scholarly journals LEA Gene Expression Assessment in Advanced Mutant Rice Genotypes under Drought Stress

2019 ◽  
Vol 2019 ◽  
pp. 1-8
Author(s):  
Zarifth Shafika Kamarudin ◽  
Mohd Rafii Yusop ◽  
Mohd Razi Ismail ◽  
Mahmud Tengku Muda Mohamed ◽  
Abdul Rahim Harun ◽  
...  
Keyword(s):  
Drought Stress ◽  
Drought Tolerance ◽  
Expression Patterns ◽  
Photochemical Efficiency ◽  
Late Embryogenesis Abundant ◽  
Physiological Adaptation ◽  
Lea Proteins ◽  
Drought Stress Condition ◽  
Rice Genotypes ◽  
Upregulated Genes

Late embryogenesis abundant (LEA) proteins are primarily found in plants stem, roots, and other organs and play significant roles in tolerance to several abiotic stresses. Plants synthesize a discrete set of LEA proteins in response to drought stress. In this study, the expression patterns of LEA genes were investigated in two advanced mutant rice genotypes subjected to the drought stress condition and different physiological traits including photosynthetic rate, leaf chlorophyll content, and photosystem II (PSII) photochemical efficiency (Fv/Fm) which were analyzed to confirm their drought tolerance. Five LEA genes (OsLEA1, OsLEA2, OsLEA3, OsLEA4, and OsLEA5) were used in the evaluation of rice genotypes and were significantly upregulated by more than 4-fold for MR219-4 and MR219-9. The upregulated genes by these two varieties showed high similarity with the drought-tolerant check variety, Aeron1. This indicates that these advanced mutant genotypes have better tolerance to drought stress. The changes in the expression level of LEA genes among the selected rice genotypes under drought stress were further confirmed. Hence, LEA genes could be served as a potential tool for drought tolerance determination in rice. MR219-4 and MR219-9 were found to be promising in breeding for drought tolerance as they offer better physiological adaptation to drought stress.

scholarly journals Drought Tolerance in Wheat

2013 ◽  
Vol 2013 ◽  
pp. 1-12 ◽  
Author(s):  
Arash Nezhadahmadi ◽  
Zakaria Hossain Prodhan ◽  
Golam Faruq
Keyword(s):  
Drought Stress ◽  
Drought Tolerance ◽  
Review Paper ◽  
Expression Patterns ◽  
Late Embryogenesis Abundant ◽  
Glutathione S Transferase ◽  
Molecular Responses ◽  
Drought Tolerant ◽  
Late Embryogenesis ◽  
Different Types

Drought is one of the most important phenomena which limit crops’ production and yield. Crops demonstrate various morphological, physiological, biochemical, and molecular responses to tackle drought stress. Plants’ vegetative and reproductive stages are intensively influenced by drought stress. Drought tolerance is a complicated trait which is controlled by polygenes and their expressions are influenced by various environmental elements. This means that breeding for this trait is so difficult and new molecular methods such as molecular markers, quantitative trait loci (QTL) mapping strategies, and expression patterns of genes should be applied to produce drought tolerant genotypes. In wheat, there are several genes which are responsible for drought stress tolerance and produce different types of enzymes and proteins for instance, late embryogenesis abundant (lea), responsive to abscisic acid (Rab), rubisco, helicase, proline, glutathione-S-transferase (GST), and carbohydrates during drought stress. This review paper has concentrated on the study of water limitation and its effects on morphological, physiological, biochemical, and molecular responses of wheat with the possible losses caused by drought stress.

scholarly journals Growth Performance and Antioxidant Enzyme Activities of Advanced Mutant Rice Genotypes under Drought Stress Condition

Agronomy ◽  
2018 ◽  
Vol 8 (12) ◽  
pp. 279 ◽  
Author(s):  
Zarifth Kamarudin ◽  
Mohd Yusop ◽  
Mahmud Tengku Muda Mohamed ◽  
Mohd Ismail ◽  
Abdul Harun
Keyword(s):  
Drought Stress ◽  
Drought Tolerance ◽  
Enzyme Activities ◽  
Stress Condition ◽  
Growth Parameters ◽  
Proline Content ◽  
Antioxidant Enzyme Activities ◽  
Drought Tolerant ◽  
Drought Stress Condition ◽  
Rice Genotypes

Drought stress affects various physiological and metabolic processes in rice (Oryza sativa L.) plant. Non-availability of high-yielding varieties suitable for cultivation under drought condition lead towards a sharp decline in rice yield. Induce mutation is an essential auxiliary approach to counterpart conventional breeding to produce stress-tolerance rice variety. The current study was aimed to identify two advanced mutant rice genotypes as drought-tolerant using growth parameters and antioxidant enzyme activities. The advanced mutant rice genotypes, MR219-4 and MR219-9, showed a minimal reduction on all growth parameters, yield, and yield components measured for drought tolerance. MR219-4 had a slight reduction on total dry weight and chlorophyll content under drought stress condition. Proline content increased significantly in drought-tolerant rice genotypes and the highest proline content was obtained from MR219-4 followed by MR219-9 under drought stress. Catalase, ascorbate peroxidase, and guaiacol peroxidase activities were significantly increased in drought stress treatment in all the rice genotypes. MR219-4 and MR219-9 were identified as high-yielding drought-tolerant genotypes as they maintained good performance under drought stress condition for all the measured traits compared to the drought-tolerant check varieties, Aeron1 and MR219, thus, this might be underlying selection criteria for a drought tolerance rice breeding programme.

scholarly journals Genetic Diversity of Selected Rice Genotypes under Water Stress Conditions

Plants ◽  
2020 ◽  
Vol 10 (1) ◽  
pp. 27
Author(s):  
Mahmoud M. Gaballah ◽  
Azza M. Metwally ◽  
Milan Skalicky ◽  
Mohamed M. Hassan ◽  
Marian Brestic ◽  
...  
Keyword(s):  
Genetic Diversity ◽  
Water Stress ◽  
Drought Stress ◽  
Drought Tolerance ◽  
Ssr Markers ◽  
Similarity Index ◽  
Stress Conditions ◽  
Yield Potential ◽  
Drought Tolerant ◽  
Rice Genotypes

Drought is the most challenging abiotic stress for rice production in the world. Thus, developing new rice genotype tolerance to water scarcity is one of the best strategies to achieve and maximize high yield potential with water savings. The study aims to characterize 16 rice genotypes for grain and agronomic parameters under normal and drought stress conditions, and genetic differentiation, by determining specific DNA markers related to drought tolerance using Simple Sequence Repeats (SSR) markers and grouping cultivars, establishing their genetic relationship for different traits. The experiment was conducted under irrigated (normal) and water stress conditions. Mean squares due to genotype × environment interactions were highly significant for major traits. For the number of panicles/plants, the genotypes Giza179, IET1444, Hybrid1, and Hybrid2 showed the maximum mean values. The required sterility percentage values were produced by genotypes IET1444, Giza178, Hybrid2, and Giza179, while, Sakha101, Giza179, Hybrid1, and Hybrid2 achieved the highest values of grain yield/plant. The genotypes Giza178, Giza179, Hybrid1, and Hybrid2, produced maximum values for water use efficiency. The effective number of alleles per locus ranged from 1.20 alleles to 3.0 alleles with an average of 1.28 alleles, and the He values for all SSR markers used varied from 0.94 to 1.00 with an average of 0.98. The polymorphic information content (PIC) values for the SSR were varied from 0.83 to 0.99, with an average of 0.95 along with a highly significant correlation between PIC values and the number of amplified alleles detected per locus. The highest similarity coefficient between Giza181 and Giza182 (Indica type) was observed and are susceptible to drought stress. High similarity percentage between the genotypes (japonica type; Sakha104 with Sakha102 and Sakha106 (0.45), Sakha101 with Sakha102 and Sakha106 (0.40), Sakha105 with Hybrid1 (0.40), Hybrid1 with Giza178 (0.40) and GZ1368-S-5-4 with Giza181 (0.40)) was also observed, which are also susceptible to drought stress. All genotypes are grouped into two major clusters in the dendrogram at 66% similarity based on Jaccard’s similarity index. The first cluster (A) was divided into two minor groups A1 and A2, in which A1 had two groups A1-1 and A1-2, containing drought-tolerant genotypes like IET1444, GZ1386-S-5-4 and Hybrid1. On the other hand, the A1-2 cluster divided into A1-2-1 containing Hybrid2 genotype and A1-2-2 containing Giza179 and Giza178 at coefficient 0.91, showing moderate tolerance to drought stress. The genotypes GZ1368-S-5-4, IET1444, Giza 178, and Giza179, could be included as appropriate materials for developing a drought-tolerant variety breeding program. Genetic diversity to grow new rice cultivars that combine drought tolerance with high grain yields is essential to maintaining food security.

scholarly journals In Vitro Assessment of Kurdish Rice Genotypes in Response to PEG-Induced Drought Stress

2020 ◽  
Vol 10 (13) ◽  
pp. 4471
Author(s):  
Didar Rahim ◽  
Petr Kalousek ◽  
Nawroz Tahir ◽  
Tomáš Vyhnánek ◽  
Petr Tarkowski ◽  
...  
Keyword(s):  
Drought Stress ◽  
Drought Tolerance ◽  
Growth Parameters ◽  
Oryza Sativa L ◽  
Polymorphic Information Content ◽  
Callus Growth ◽  
Antioxidant Systems ◽  
In Vitro Tests ◽  
Rice Genotypes

Rice (Oryza sativa L.) is productively affected by different environmental factors, including biotic and abiotic stress. The objectives of this research were to evaluate the genetic distinction among Kurdish rice genotypes using the simple sequence repeats (SSRs) molecular markers and to perform in vitro tests to characterize the drought tolerance of six local rice genotypes. The polymorphic information content (PIC) varied from 0.38 to 0.84 with an average of 0.56. The genetic distance ranged from 0.33 to 0.88. Drought stress had a significant impact (p ≤ 0.05) on callus growth parameters. Enzymatic antioxidant systems were predicted and exhibited a significant variation. The findings revealed that proline levels increase in proportion to polyethylene glycol (PEG) concentrations. Kalar and Gwll Swr genotypes showed the worst performances in phenotypic and biochemical traits, while Choman and Shawre exhibited the best phenotypic and biochemical performances. A positive and substantial relationship between callus fresh weight (CFW) and callus dry weight (CDW) was found under stressful and optimized conditions. Callus induction (CI) was positively and significantly associated with the catalase activity (CAT) in all stressed treatments. Based on the results for callus growth and the biochemical parameters under stress conditions, a remarkable genotype distinction, based on the tolerance reaction, was noted as follows: PEG resistant > susceptible, Choman > Shawre > White Bazyan > Red Bazyan > Gwll Swr > Kalar. The CI and CAT characteristics were considered as reliable predictors of drought tolerance in rice genotypes.

scholarly journals Evaluation of Rice (Oryza sativa L.) Genotypes for Drought Tolerance at Germination and Early Seedling Stage

2018 ◽  
Vol 16 (1) ◽  
pp. 44-54 ◽  
Author(s):  
M M Islam ◽  
E Kayesh ◽  
E Zaman ◽  
T A Urmi ◽  
M M Haque
Keyword(s):  
Oryza Sativa ◽  
Water Stress ◽  
Drought Stress ◽  
Drought Tolerance ◽  
Evaluation System ◽  
Oryza Sativa L ◽  
Dry Weight ◽  
Seedling Height ◽  
Early Seedling ◽  
Rice Genotypes

Drought stress is a major constraint to the production and yield stability of crops. Rice (Oryza sativa L.) is considered as a drought-sensitive crop species. Within this species, there are considerable varietal differences in sensitivity to this environmental stress. An experiment was conducted at the laboratory of the Department of Agronomy, Bangabandhu Sheikh Mujibur Rahman Agricultural University (BSMRAU), Bangladesh during April to September 2016 to evaluate 100 rice genotypes for drought tolerance during germination and early seedling growth stage. The genotypes were tested against five levels of drought stress imposed by Polyethylene glycol 6000 (PEG-6000) @ 0, 5, 10, 15 and 20%. The experiment was laid out in a complete randomized design with four replications. The results showed that with increasing water stress, germination in all the genotypes decreased from 95.8% in control to 6.6 % in highest stress (20% PEG) level. Seedling height and dry weight also decreased in all rice genotypes with the increase in water stress level. Based on Standard Evaluation System (SES),18 genotypes were selected primarily. Among the 18 genotypes, Ratoil and Chinisakkar showed higher germination index, relative seedling height and relative seedling dry weight than the check drought tolerant BRRI dhan43 at 20% PEG. Beside these, performance of Kumridhan, Pusur and Somondori was also well at this level compared to BRRI dhan43. The genotypes Ratoil, Chinisakkar, Kumridhan, Pusur and Somondori showed the best performance under drought condition. The Agriculturists 2018; 16(1) 44-54

scholarly journals Coordinated Regulation of Arbuscular Mycorrhizal Fungi and Soybean MAPK Pathway Genes Improved Mycorrhizal Soybean Drought Tolerance

2015 ◽  
Vol 28 (4) ◽  
pp. 408-419 ◽  
Author(s):  
Zhilei Liu ◽  
Yuanjing Li ◽  
Lina Ma ◽  
Haichao Wei ◽  
Jianfeng Zhang ◽  
...  
Keyword(s):  
Drought Stress ◽  
Stress Response ◽  
Drought Tolerance ◽  
Arbuscular Mycorrhizal Fungi ◽  
Mycorrhizal Fungi ◽  
Mapk Pathway ◽  
Expression Patterns ◽  
Soluble Sugar ◽  
Arbuscular Mycorrhizal ◽  
Mapk Cascades

Mitogen-activated protein kinase (MAPK) cascades play important roles in the stress response in both plants and microorganisms. The mycorrhizal symbiosis established between arbuscular mycorrhizal fungi (AMF) and plants can enhance plant drought tolerance, which might be closely related to the fungal MAPK response and the molecular dialogue between fungal and soybean MAPK cascades. To verify the above hypothesis, germinal Glomus intraradices (syn. Rhizophagus irregularis) spores and potted experiments were conducted. The results showed that AMF GiMAPKs with high homology with MAPKs from Saccharomyces cerevisiae had different gene expression patterns under different conditions (nitrogen starvation, abscisic acid treatment, and drought). Drought stress upregulated the levels of fungi and soybean MAPK transcripts in mycorrhizal soybean roots, indicating the possibility of a molecular dialogue between the two symbiotic sides of symbiosis and suggesting that they might cooperate to regulate the mycorrhizal soybean drought-stress response. Meanwhile, the changes in hydrogen peroxide, soluble sugar, and proline levels in mycorrhizal soybean as well as in the accelerated exchange of carbon and nitrogen in the symbionts were contributable to drought adaptation of the host plants. Thus, it can be preliminarily inferred that the interactions of MAPK signals on both sides, symbiotic fungus and plant, might regulate the response of symbiosis and, thus, improve the resistance of mycorrhizal soybean to drought stress.

scholarly journals Physiological and Proteomic Analysis Revealed the Response Mechanisms of two Different Grought-resistant Maize Varieties

2021 ◽  
Author(s):  
Hongjie Li ◽  
Mei Yang ◽  
Chengfeng Zhao ◽  
Yifan Wang ◽  
Renhe Zhang
Keyword(s):  
Drought Stress ◽  
Drought Tolerance ◽  
Stress Responses ◽  
Molecular Chaperones ◽  
Electron Flow ◽  
Photochemical Efficiency ◽  
Growth And Yield ◽  
Protective Mechanism ◽  
Drought Tolerant ◽  
Maize Varieties

Abstract Background: Drought stress seriously limits the seedling growth and yield of maize. Despite previous studies on drought resistance mechanisms by which maize cope with water deficient, the link between physiological and molecular variations are largely unknown. To reveal the complex regulatory mechanisms, comparative physiology and proteomic analyses were conducted to investigate the stress responses of two maize cultivars with contrasting tolerance to drought stress. Results: Physiological results showed that SD609 (drought-tolerant) maintains higher photochemical efficiency by enhancing CEF (cyclic electron flow) protective mechanism and antioxidative enzymes activities. Proteomics analysis revealed a total of 198 and 102 proteins were differentially expressed in SD609 and SD902, respectively. Further enrichment analysis indicated that drought-tolerant ‘SD609’ increased the expression of proteins related to photosynthesis, antioxidants/detoxifying enzymes, molecular chaperones and metabolic enzymes. The up-regulation proteins related to PSII repair and photoprotection mechanisms resulted in more efficient photochemical capacity in tolerant variety under moderate drought. However, the drought-sensitive ‘SD902’ only induced molecular chaperones and sucrose synthesis pathways, and failed to protect the impaired photosystem. Further analysis indicated that proteins related to the electron transport chain, redox homeostasis and heat shock proteins (HSPs) could be important in protecting plants from drought stress. Conclusions: Our experiments explored the mechanism of drought tolerance, and obtained detailed information about the interconnection of physiological research and protein research. In summary, our findings could provide new clues into further understanding of drought tolerance mechanisms in maize.

scholarly journals Drought tolerance test of various potential local rice genotypes in Aceh West-South Region at vegetative stages

2021 ◽  
Vol 911 (1) ◽  
pp. 012005
Author(s):  
Wira Hadianto ◽  
Dewi Junita ◽  
Yuliatul Muslimah ◽  
Nana Ariska ◽  
Sumeinika Fitria Lizmah ◽  
...  
Keyword(s):  
Drought Stress ◽  
Drought Tolerance ◽  
Plant Height ◽  
Block Design ◽  
Dry Weight ◽  
Tolerance Test ◽  
Randomized Block Design ◽  
Affected Plant ◽  
Rice Genotypes ◽  
High Yielding Varieties

Abstract Aceh has a lot of local rice genotypes that locally cultivated in West- South Region Aceh. The potential of local rice as a source of genes have not been evaluated and identified of drought tolerance. Abiotic stresses such as drought are serious things that affected plant productivity. This study aimed to determine the drought tolerance of several potential local rice genotypes in South-West Region Aceh as parents (P1) in order to become the basic population in creating the new high yielding varieties that were resistant to drought. This study was carried out in Randomized Block Design (RDB) with 3 replications. The observed variables were: Plant height and Number of tiller per clumps at 10, 20, 30 and 40 days after planting, root length, number of roots, wet and dry weight of roots at days 40 after planting. The study found that the treatment of drought stress significantly affect the plant height and number of tillers, best result was found at rangan lango genotype. Based on the research results, it can be concluded that there are 3 genotypes of local West-South Aceh region that are potentially resistant to drought stress in the vegetative Stage, namely the Lango genotype, Arias genotype and Pade Manggeng genotype.

scholarly journals Transcriptome analysis and molecular mechanism of linseed (Linum usitatissimum L.) drought tolerance under repeated drought using single-molecule long-read sequencing

2020 ◽  
Author(s):  
Wei Wang ◽  
Lei Wang ◽  
Ling Wang ◽  
Meilian Tan ◽  
Collins O. Ogutu ◽  
...  
Keyword(s):  
Drought Stress ◽  
Drought Tolerance ◽  
Single Molecule ◽  
Linum Usitatissimum ◽  
Molecular Mechanisms ◽  
Expression Patterns ◽  
Resistant Variety ◽  
Drought Treatment ◽  
Oil Crops ◽  
Drought Resistant

Abstract Background Oil flax (Linum usitatissimum L.) also as known as linseed is one of the most important oil crops in the world. Although linseed was reported to show better tolerance to abiotic stress conditions compared to other oil crops, the molecular mechanisms underlying linseed tolerance to drought stress are largely unknown. Moreover, as a result of climate change, drought dramatically reduces linseed yield and quality, but so far very little is known about how linseed coordinates the drought-resistant genes expression of response to different level of drought stress on the genome-wide level. Results To explore the transcriptional response of linseed to drought stress (DS) and repeated drought stress (RD), we first determined the drought tolerance of different linseed varieties. Then we performed full-length transcriptome sequencing of drought-resistant variety (Z141) and drought-sensitive variety (NY-17) using single-molecule real-time sequencing and RNA-sequencing under drought stress (DS) and repeated drought stress (RD) at the seedling stage. Gene Ontology (GO) enrichment analysis showed that compared with NY-17, the up-regulated genes of Z141 were enriched in more functional pathways related to plant drought tolerance under drought stress. In addition, the number of up-regulated genes in linseed under RD was more 30% than it under DS. In addition, a total of, 4,436 linseed transcription factors were identified, of these, 1,190 genes were responsive to stress treatments. Finally, the expression patterns of proline biosynthesis and DNA repair structural genes were verified by RT- PCR. Conclusions Drought tolerance of Z141 may be related to its specifically up-regulated drought tolerance genes under drought stress. Several variable physiological responses occurred in repeated than in sustained drought treatment. Sum up, this study provides a new perspective to understand the drought adaptability of linseed.

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