scholarly journals The root system of pedunculate oak (Quercus robur L.) at the margins of regenerated stands

2017 ◽  
Vol 63 (No. 1) ◽  
pp. 22-33 ◽  
Author(s):  
Mauer Oldřich ◽  
Houšková Kateřina ◽  
Mikita Tomáš
Keyword(s):  
Root System ◽  
Soil Moisture Content ◽  
Global Solar Radiation ◽  
Root System Architecture ◽  
Root Density ◽  
Pedunculate Oak ◽  
Biometric Parameters ◽  
Adult Trees ◽  
Irregular Growth

The paper aims to contribute to the determination of reasons causing the irregular growth of young pedunculate oaks occurring at the margins of naturally and artificially regenerated plots neighbouring with adult stands on alluvial sites. It presents analyses of aboveground biometric parameters, mortality, root system architecture of young trees, root density in the soil profile, global solar radiation and soil moisture content in dependence on the location of oaks at the northern, southern, eastern or western margins of the regenerated area and on the distance from the stand margin. The highest impact of the neighbouring adult stand is always recorded on the margin of the regenerated plot while its effect is weakening towards the plot centre, and fading away ca. 7 m behind the crown projection of adult trees. Regardless of the oak location (northern, southern, eastern or western margin), the cause is a high root density of marginal trees of the adult stand, which induces the critical lack of water under their crown projections.

Quantifying the effect of soil moisture content on segmenting root system architecture in X-ray computed tomography images

2013 ◽  
Vol 370 (1-2) ◽  
pp. 35-45 ◽  
Author(s):  
Susan Zappala ◽  
Stefan Mairhofer ◽  
Saoirse Tracy ◽  
Craig J. Sturrock ◽  
Malcolm Bennett ◽  
...  
Keyword(s):  
Computed Tomography ◽  
Soil Moisture ◽  
Moisture Content ◽  
Root System ◽  
System Architecture ◽  
Soil Moisture Content ◽  
Root System Architecture ◽  
X Ray ◽  
Computed Tomography Images ◽  
X Ray Computed

scholarly journals Genotypic diversity and plasticity of root system architecture to nitrogen availability in oilseed rape

PLoS ONE ◽  
2021 ◽  
Vol 16 (5) ◽  
pp. e0250966
Author(s):  
Christophe Lecarpentier ◽  
Loïc Pagès ◽  
Céline Richard-Molard
Keyword(s):  
Root System ◽  
Oilseed Rape ◽  
System Architecture ◽  
Lateral Root ◽  
Nitrogen Availability ◽  
Root System Architecture ◽  
Root Diameter ◽  
Root Density ◽  
Model Parameters ◽  
New Varieties

In the emerging new agricultural context, a drastic reduction in fertilizer usage is required. A promising way to maintain high crop yields while reducing fertilizer inputs is to breed new varieties with optimized root system architecture (RSA), designed to reach soil resources more efficiently. This relies on identifying key traits that underlie genotypic variability and plasticity of RSA in response to nutrient availability. The aim of our study was to characterize the RSA plasticity in response to nitrogen limitation of a set of contrasted oilseed rape genotypes, by using the ArchiSimple model parameters as screening traits. Eight accessions of Brassica napus were grown in long tubes in the greenhouse, under two contrasting levels of nitrogen availability. After plant excavation, roots were scanned at high resolution. Six RSA traits relative to root diameter, elongation rate and branching were measured, as well as nine growth and biomass allocation traits. The plasticity of each trait to nitrogen availability was estimated. Nitrogen-limited plants were characterized by a strong reduction in total biomass and leaf area. Even if the architecture traits were shown to be less plastic than allocation traits, significant nitrogen and genotype effects were highlighted on each RSA trait, except the root minimal diameter. Thus, the RSA of nitrogen-limited plants was primarily characterised by a reduced lateral root density, a smaller primary root diameter, associated with a stronger root dominance. Among the RSA traits measured, the inter-branch distance showed the highest plasticity with a level of 70%, in the same range as the most plastic allocation traits. This work suggests that lateral root density plays the key role in the adaptation of the root system to nitrogen availability and highlights inter-branch distance as a major target trait for breeding new varieties, better adapted to low input systems.

scholarly journals Comprehensive Genome-Wide Association Analysis Reveals the Genetic Basis of Root System Architecture in Soybean

2020 ◽  
Vol 11 ◽  
Author(s):  
Waldiodio Seck ◽  
Davoud Torkamaneh ◽  
François Belzile
Keyword(s):  
Root System ◽  
System Architecture ◽  
Phenotypic Variation ◽  
Genetic Basis ◽  
Genome Wide Association Study ◽  
Primary Root ◽  
Root System Architecture ◽  
Genome Wide Association ◽  
Nucleotide Polymorphisms ◽  
Genome Wide

Increasing the understanding genetic basis of the variability in root system architecture (RSA) is essential to improve resource-use efficiency in agriculture systems and to develop climate-resilient crop cultivars. Roots being underground, their direct observation and detailed characterization are challenging. Here, were characterized twelve RSA-related traits in a panel of 137 early maturing soybean lines (Canadian soybean core collection) using rhizoboxes and two-dimensional imaging. Significant phenotypic variation (P < 0.001) was observed among these lines for different RSA-related traits. This panel was genotyped with 2.18 million genome-wide single-nucleotide polymorphisms (SNPs) using a combination of genotyping-by-sequencing and whole-genome sequencing. A total of 10 quantitative trait locus (QTL) regions were detected for root total length and primary root diameter through a comprehensive genome-wide association study. These QTL regions explained from 15 to 25% of the phenotypic variation and contained two putative candidate genes with homology to genes previously reported to play a role in RSA in other species. These genes can serve to accelerate future efforts aimed to dissect genetic architecture of RSA and breed more resilient varieties.

scholarly journals Genome-wide association analysis unveils novel QTLs for seminal root system architecture traits in Ethiopian durum wheat

BMC Genomics ◽  
2021 ◽  
Vol 22 (1) ◽  
Author(s):  
Admas Alemu ◽  
Tileye Feyissa ◽  
Marco Maccaferri ◽  
Giuseppe Sciara ◽  
Roberto Tuberosa ◽  
...  
Keyword(s):  
Durum Wheat ◽  
Root System ◽  
System Architecture ◽  
Root Length ◽  
Dry Weight ◽  
Root System Architecture ◽  
High Density ◽  
Soil Conditions ◽  
Root Dry Weight ◽  
Seminal Roots

Abstract Background Genetic improvement of root system architecture is essential to improve water and nutrient use efficiency of crops or to boost their productivity under stress or non-optimal soil conditions. One hundred ninety-two Ethiopian durum wheat accessions comprising 167 historical landraces and 25 modern cultivars were assembled for GWAS analysis to identify QTLs for root system architecture (RSA) traits and genotyped with a high-density 90 K wheat SNP array by Illumina. Results Using a non-roll, paper-based root phenotyping platform, a total of 2880 seedlings and 14,947 seminal roots were measured at the three-leaf stage to collect data for total root length (TRL), total root number (TRN), root growth angle (RGA), average root length (ARL), bulk root dry weight (RDW), individual root dry weight (IRW), bulk shoot dry weight (SDW), presence of six seminal roots per seedling (RT6) and root shoot ratio (RSR). Analysis of variance revealed highly significant differences between accessions for all RSA traits. Four major (− log10P ≥ 4) and 34 nominal (− log10P ≥ 3) QTLs were identified and grouped in 16 RSA QTL clusters across chromosomes. A higher number of significant RSA QTL were identified on chromosome 4B particularly for root vigor traits (root length, number and/or weight). Conclusions After projecting the identified QTLs on to a high-density tetraploid consensus map along with previously reported RSA QTL in both durum and bread wheat, fourteen nominal QTLs were found to be novel and could potentially be used to tailor RSA in elite lines. The major RGA QTLs on chromosome 6AL detected in the current study and reported in previous studies is a good candidate for cloning the causative underlining sequence and identifying the beneficial haplotypes able to positively affect yield under water- or nutrient-limited conditions.

scholarly journals Rooting in the Desert: A Developmental Overview on Desert Plants

Genes ◽  
2021 ◽  
Vol 12 (5) ◽  
pp. 709
Author(s):  
Gwendolyn K. Kirschner ◽  
Ting Ting Xiao ◽  
Ikram Blilou
Keyword(s):  
Root System ◽  
Developmental Plasticity ◽  
Root System Architecture ◽  
Desert Plants ◽  
Root Cortex ◽  
Date Palms ◽  
Beneficial Impact ◽  
Scarce Water ◽  
Sessile Organisms ◽  
Secondary Roots

Plants, as sessile organisms, have evolved a remarkable developmental plasticity to cope with their changing environment. When growing in hostile desert conditions, plants have to grow and thrive in heat and drought. This review discusses how desert plants have adapted their root system architecture (RSA) to cope with scarce water availability and poor nutrient availability in the desert soil. First, we describe how some species can survive by developing deep tap roots to access the groundwater while others produce shallow roots to exploit the short rain seasons and unpredictable rainfalls. Then, we discuss how desert plants have evolved unique developmental programs like having determinate meristems in the case of cacti while forming a branched and compact root system that allows efficient water uptake during wet periods. The remote germination mechanism in date palms is another example of developmental adaptation to survive in the dry and hot desert surface. Date palms have also designed non-gravitropic secondary roots, termed pneumatophores, to maximize water and nutrient uptake. Next, we highlight the distinct anatomical features developed by desert species in response to drought like narrow vessels, high tissue suberization, and air spaces within the root cortex tissue. Finally, we discuss the beneficial impact of the microbiome in promoting root growth in desert conditions and how these characteristics can be exploited to engineer resilient crops with a greater ability to deal with salinity induced by irrigation and with the increasing drought caused by global warming.

Changes induced by lead in root system architecture of Arabidopsis seedlings are mediated by PDR2-LPR1/2 phosphate dependent way

BioMetals ◽  
2021 ◽  
Author(s):  
Ricardo Ortiz-Luevano ◽  
José López-Bucio ◽  
Miguel Martínez-Trujillo ◽  
Lenin Sánchez-Calderón
Keyword(s):  
Root System ◽  
System Architecture ◽  
Root System Architecture

scholarly journals Root System Architecture Plasticity of Bread Wheat in Response to Oxidative Burst under Extended Osmotic Stress

Plants ◽  
2021 ◽  
Vol 10 (5) ◽  
pp. 939
Author(s):  
Omar Azab ◽  
Abdullah Al-Doss ◽  
Thobayet Alshahrani ◽  
Salah El-Hendawy ◽  
Adel M. Zakri ◽  
...  
Keyword(s):  
Oxidative Stress ◽  
Membrane Potential ◽  
Osmotic Stress ◽  
Root System ◽  
Bread Wheat ◽  
System Architecture ◽  
Mitochondrial Membrane ◽  
Root System Architecture ◽  
Root Tips ◽  
Scavenging Capacity

There is a demand for an increase in crop production because of the growing population, but water shortage hinders the expansion of wheat cultivation, one of the most important crops worldwide. Polyethylene glycol (PEG) was used to mimic drought stress due to its high osmotic potentials generated in plants subjected to it. This study aimed to determine the root system architecture (RSA) plasticity of eight bread wheat genotypes under osmotic stress in relation to the oxidative status and mitochondrial membrane potential of their root tips. Osmotic stress application resulted in differences in the RSA between the eight genotypes, where genotypes were divided into adapted genotypes that have non-significant decreased values in lateral roots number (LRN) and total root length (TRL), while non-adapted genotypes have a significant decrease in LRN, TRL, root volume (RV), and root surface area (SA). Accumulation of intracellular ROS formation in root tips and elongation zone was observed in the non-adapted genotypes due to PEG-induced oxidative stress. Mitochondrial membrane potential (∆Ψm) was measured for both stress and non-stress treatments in the eight genotypes as a biomarker for programmed cell death as a result of induced osmotic stress, in correlation with RSA traits. PEG treatment increased scavenging capacity of the genotypes from 1.4-fold in the sensitive genotype Gemmiza 7 to 14.3-fold in the adapted genotype Sakha 94. The adapted genotypes showed greater root trait values, ∆Ψm plasticity correlated with high scavenging capacity, and less ROS accumulation in the root tissue, while the non-adapted genotypes showed little scavenging capacity in both treatments, accompanied by mitochondrial membrane permeability, suggesting mitochondrial dysfunction as a result of oxidative stress.

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