scholarly journals Breeding Approaches for Biotic Stress Resistance in Vegetables

2021 ◽  
Author(s):  
Ramakrishna Swarnapriya
Keyword(s):  
Environmental Pollution ◽  
Biotic Stress ◽  
Human Consumption ◽  
Breeding Methods ◽  
Sources Of Resistance ◽  
Biotic Stresses ◽  
Resistant Varieties ◽  
New Races ◽  
Safe Food ◽  
High Yielding Varieties

In vegetables the factors for biotic stress are pests, diseases and nematodes. The damages induced by these factors reflect highly on production, productivity and quality. Although application of pesticides/fungicides and nematicides has managed these stresses, excessive use of unsafe chemicals results in environmental pollution and leave residues in vegetables which are above threshold levels and also promote the development of new races/biotypes of pests and pathogens. Therefore vegetable improvement works concentrate on high yielding varieties with multiple resistance to these biotic stresses. For such studies, the knowledge on the genetic basis of resistance and plant-pest/pathogen interactions is necessary which will in turn improve the efficiency of the breeding programmes by introducing resistant genes and result in high-yielding genetically resistant cultivars. For the development of resistant varieties and pre-breed lines, information on sources of resistance is prerequisite and serve as a backbone in the breeding programme. Further, gene action responsible for the inheritance of characters helps in the choice of suitable breeding methods for the improvement of the crop. Work has been done by using the various breeding methods and resistant varieties have been bred and they offer the cheapest means of pest/disease/nematode control. Resistant varieties obviate the use of chemicals, thus reduce environmental pollution and facilitate safe food for human consumption.

scholarly journals Overview of Biotic Stresses in Pepper (Capsicum spp.): Sources of Genetic Resistance, Molecular Breeding and Genomics

2020 ◽  
Vol 21 (7) ◽  
pp. 2587 ◽  
Author(s):  
Mario Parisi ◽  
Daniela Alioto ◽  
Pasquale Tripodi
Keyword(s):  
Plant Genetic Resources ◽  
Crop Improvement ◽  
Genetic Resistance ◽  
Resistance Mechanisms ◽  
Vegetable Crops ◽  
Sources Of Resistance ◽  
The Sustainable Development ◽  
Biotic Stresses ◽  
Capsicum Spp ◽  
High Yielding Varieties

Pepper (Capsicum spp.) is one of the major vegetable crops grown worldwide largely appreciated for its economic importance and nutritional value. This crop belongs to the large Solanaceae family, which, among more than 90 genera and 2500 species of flowering plants, includes commercially important vegetables such as tomato and eggplant. The genus includes over 30 species, five of which (C. annuum, C. frutescens, C. chinense, C. baccatum, and C. pubescens) are domesticated and mainly grown for consumption as food and for non-food purposes (e.g., cosmetics). The main challenges for vegetable crop improvement are linked to the sustainable development of agriculture, food security, the growing consumers’ demand for food. Furthermore, demographic trends and changes to climate require more efficient use of plant genetic resources in breeding programs. Increases in pepper consumption have been observed in the past 20 years, and for maintaining this trend, the development of new resistant and high yielding varieties is demanded. The range of pathogens afflicting peppers is very broad and includes fungi, viruses, bacteria, and insects. In this context, the large number of accessions of domesticated and wild species stored in the world seed banks represents a valuable resource for breeding in order to transfer traits related to resistance mechanisms to various biotic stresses. In the present review, we report comprehensive information on sources of resistance to a broad range of pathogens in pepper, revisiting the classical genetic studies and showing the contribution of genomics for the understanding of the molecular basis of resistance.

scholarly journals Genome-Wide Transcriptomic Identification and Functional Insight of Lily WRKY Genes Responding to Botrytis Fungal Disease

Plants ◽  
2021 ◽  
Vol 10 (4) ◽  
pp. 776
Author(s):  
Shipra Kumari ◽  
Bashistha Kumar Kanth ◽  
Ju young Ahn ◽  
Jong Hwa Kim ◽  
Geung-Joo Lee
Keyword(s):  
Abiotic Stress ◽  
Biotic Stress ◽  
Developmental Stages ◽  
Expression Patterns ◽  
Lilium Longiflorum ◽  
Biotic And Abiotic Stress ◽  
Biotic Stresses ◽  
Genome Wide

Genome-wide transcriptome analysis using RNA-Seq of Lilium longiflorum revealed valuable genes responding to biotic stresses. WRKY transcription factors are regulatory proteins playing essential roles in defense processes under environmental stresses, causing considerable losses in flower quality and production. Thirty-eight WRKY genes were identified from the transcriptomic profile from lily genotypes, exhibiting leaf blight caused by Botrytis elliptica. Lily WRKYs have a highly conserved motif, WRKYGQK, with a common variant, WRKYGKK. Phylogeny of LlWRKYs with homologous genes from other representative plant species classified them into three groups- I, II, and III consisting of seven, 22, and nine genes, respectively. Base on functional annotation, 22 LlWRKY genes were associated with biotic stress, nine with abiotic stress, and seven with others. Sixteen unique LlWRKY were studied to investigate responses to stress conditions using gene expression under biotic and abiotic stress treatments. Five genes—LlWRKY3, LlWRKY4, LlWRKY5, LlWRKY10, and LlWRKY12—were substantially upregulated, proving to be biotic stress-responsive genes in vivo and in vitro conditions. Moreover, the expression patterns of LlWRKY genes varied in response to drought, heat, cold, and different developmental stages or tissues. Overall, our study provides structural and molecular insights into LlWRKY genes for use in the genetic engineering in Lilium against Botrytis disease.

scholarly journals Proteomics and Metabolomics Studies on the Biotic Stress Responses of Rice: an Update

Rice ◽  
2021 ◽  
Vol 14 (1) ◽  
Author(s):  
Kieu Thi Xuan Vo ◽  
Md Mizanor Rahman ◽  
Md Mustafizur Rahman ◽  
Kieu Thi Thuy Trinh ◽  
Sun Tae Kim ◽  
...  
Keyword(s):  
Stress Responses ◽  
Biotic Stress ◽  
Defense Mechanisms ◽  
Defense Responses ◽  
Global Changes ◽  
Biotic Stresses ◽  
Novel Proteins ◽  
Stress Agent ◽  
Global Food ◽  
Shed Light

AbstractBiotic stresses represent a serious threat to rice production to meet global food demand and thus pose a major challenge for scientists, who need to understand the intricate defense mechanisms. Proteomics and metabolomics studies have found global changes in proteins and metabolites during defense responses of rice exposed to biotic stressors, and also reported the production of specific secondary metabolites (SMs) in some cultivars that may vary depending on the type of biotic stress and the time at which the stress is imposed. The most common changes were seen in photosynthesis which is modified differently by rice plants to conserve energy, disrupt food supply for biotic stress agent, and initiate defense mechanisms or by biotic stressors to facilitate invasion and acquire nutrients, depending on their feeding style. Studies also provide evidence for the correlation between reactive oxygen species (ROS) and photorespiration and photosynthesis which can broaden our understanding on the balance of ROS production and scavenging in rice-pathogen interaction. Variation in the generation of phytohormones is also a key response exploited by rice and pathogens for their own benefit. Proteomics and metabolomics studies in resistant and susceptible rice cultivars upon pathogen attack have helped to identify the proteins and metabolites related to specific defense mechanisms, where choosing of an appropriate method to identify characterized or novel proteins and metabolites is essential, considering the outcomes of host-pathogen interactions. Despites the limitation in identifying the whole repertoire of responsive metabolites, some studies have shed light on functions of resistant-specific SMs. Lastly, we illustrate the potent metabolites responsible for resistance to different biotic stressors to provide valuable targets for further investigation and application.

scholarly journals A linkage of gene of resistance to a broomrape race G with microsatellite loci of a sunflower linedonor RGP1 of VNIIMK’s breeding

2021 ◽  
Vol 186 (2) ◽  
pp. 3-9
Author(s):  
S.Z. Guchetl ◽  
◽  
D.L. Savichenko ◽  
Keyword(s):  
Microsatellite Loci ◽  
Physical Map ◽  
Pcr Analysis ◽  
Sources Of Resistance ◽  
Resistant Varieties ◽  
Literary Sources ◽  
Ssr Loci ◽  
Environmentally Safe ◽  
Yield Formation ◽  
Sunflower Genome

Broomrape (Orobanche cumana Wallr.) is one of the main biotic factors limiting high sunflower yield formation. The most effective and environmentally safe method of protection is cultivation of resistant varieties and hybrids of sunflower. Development of resistant sunflower genotypes includes search and usage of sources of resistance in breeding process as well as accurate and productive procedures of material assessment. The purpose of the research is to analyze a linkage of a gene Or7 with microsatellite loci of the line-donor of resistance to broomrape race G from the VNIIMK’s collection. The objects of the research are the line RGP1 – a donor of resistance to broomrape race G and a susceptible to this race line VR 678 from the VNIIMK’s collection. Sunflower plants were crossed in field to produce F1. Also we conducted self-pollination of F1 plants to obtain F2 progeny. Plants were tested in a greenhouse in soil infected with seeds of broomrape race G using a method of early diagnostic. Sunflower DNA was extracted from the top leaves of the young sprouts of the vegetative plants. For PCR-analysis we used three SSR-primers demonstrated polymorphism in parental lines: ORS 683, ORS 1040, and ORS 1112. We tested joint inheritance of the gene Or7 and these loci, and inheritance between SSR-loci. An independent inheritance of the gene Or7 with DNA-loci ORS 683, ORS 1040, and ORS 1112, as well as SSR-loci between ORS 1040 and ORS 1112, ORS 1040 and ORS 683 was showed. Loci ORS683 – ORS 1112 are linked with a frequency of recombination of 0.27 ± 0.41 (27 cM). As a result of our research location of the gene Or7 in the nearest area to microsatellite loci ORS 683, ORS 1040, and ORS 1112 was excluded. Basing on studied literary sources and a representative sunflower genome HanXRQr2.0-SUNRISE we made a partial physical map LG3 for determination of an area for the further search of a localization of the Or7 and DNAmarkers co-segregating with this gene.

scholarly journals A Review on Polyamines and Biotic Stresses in Plants

2018 ◽  
Vol 6 (5) ◽  
Author(s):  
Md Azizul Islam ◽  
Pulak Maitra ◽  
Dipa Mandal
Keyword(s):  
Biotic Stress ◽  
Negative Charge ◽  
Science Research ◽  
Plant Science ◽  
Low Molecular Weight ◽  
Biological Functions ◽  
Membrane Stabilization ◽  
Biotic Stresses ◽  
Naturally Occurring ◽  
Recent Advancement

The biotic stresses are one of the main causes to the loss of crops, and their development, growth and productivity in the environment. Polyamines are positively charge compounds that have active potential power to DNA, RNA and protein (negative charge compounds), are exist in all living life for their low molecular weight and smallness. Naturally occurring polyamines are involved biotic stress response especially different plants disease and contribute the survival of plant in environment. They contribute a lot of different biological functions, such as controlling the cell cycle, protecting the cell, involve in gene expression, cell signaling replication, transcription, translation and membrane stabilization. This article specially highlights the recent advancement of polyamines in modern plant science research their impact of biotic stress specially the diseases caused by different microorganisms (bacteria, fungus) and creature systems.

scholarly journals Pigeonpea composite collection and identification of germplasm for use in crop improvement programmes

2011 ◽  
Vol 9 (01) ◽  
pp. 97-108 ◽  
Author(s):  
H. D. Upadhyaya ◽  
K. N. Reddy ◽  
Shivali Sharma ◽  
R. K. Varshney ◽  
R. Bhattacharjee ◽  
...  
Keyword(s):  
Agronomic Traits ◽  
Crop Improvement ◽  
Germplasm Collection ◽  
Sources Of Resistance ◽  
Abiotic And Biotic Stresses ◽  
Biotic Stresses ◽  
Mini Core Collection ◽  
Breeding Programmes ◽  
Simple Sequence ◽  
High Seed Yield

Pigeonpea (Cajanus cajan(L.) Millsp. is one of the most important legume crops as major source for proteins, minerals and vitamins, in addition to its multiple uses as food, feed, fuel, soil enricher, or soil binder, and in fencing, roofing and basket making. ICRISAT's genebank conserves 13,632 accessions of pigeonpea. The extensive use of few parents in crop improvement is contrary to the purpose of collecting a large number of germplasm accessions and has resulted in a narrow base of cultivars. ICRISAT, in collaboration with the Generation Challenge Program, has developed a composite collection of pigeonpea consisting of 1000 accessions representing the diversity of the entire germplasm collection. This included 146 accessions of mini core collection and other materials. Genotyping of the composite collection using 20 microsatellite or simple sequence repeat (SSR) markers separated wild and cultivated types in two broad groups. A reference set comprising 300 most diverse accessions has been selected based on SSR genotyping data. Phenotyping of the composite collection for 16 quantitative and 16 qualitative traits resulted in the identification of promising diverse accessions for the four important agronomic traits: early flowering (96 accessions), high number of pods (28), high 100-seed weight (88) and high seed yield/plant (49). These accessions hold potential for their utilization in pigeonpea breeding programmes to develop improved cultivars with a broad genetic base. Pigeonpea germplasm has provided sources of resistance to abiotic and biotic stresses and cytoplasmic-male sterility for utilization in breeding programmes.

SOURCES OF RESISTANCE IN BARLEY TO PYRENOPHORA TERES

1965 ◽  
Vol 45 (2) ◽  
pp. 189-193 ◽  
Author(s):  
K. W. Buchannon ◽  
W. C. McDonald
Keyword(s):  
North Dakota ◽  
Quality Characteristics ◽  
Seedling Stage ◽  
Malting Quality ◽  
Western Canada ◽  
Pyrenophora Teres ◽  
Net Blotch ◽  
Sources Of Resistance ◽  
Highly Pathogenic ◽  
Resistant Varieties

The reaction to infection by Pyrenophora teres Drechs., the incitant of net blotch of barley, was determined for 6,174 varieties in the U.S.D.A. World Barley Collection. Forty varieties, seventeen of them from Ethiopia, were resistant in the seedling stage to a highly pathogenic strain of the fungus prevalent in Western Canada and to composites of isolates from Manitoba, Saskatchewan, Alberta, Ontario, North Dakota, California, and Mexico. They were also resistant in the field at three locations in Western Canada. Agronomic and malting quality characteristics for the resistant varieties were also recorded.

scholarly journals Melatonin and Its Protective Role against Biotic Stress Impacts on Plants

Biomolecules ◽  
2019 ◽  
Vol 10 (1) ◽  
pp. 54 ◽  
Author(s):  
Mohamed Moustafa-Farag ◽  
Abdulwareth Almoneafy ◽  
Ahmed Mahmoud ◽  
Amr Elkelish ◽  
Marino B. Arnao ◽  
...  
Keyword(s):  
Plant Resistance ◽  
Biotic Stress ◽  
Growth Regulation ◽  
Protective Role ◽  
Virus Concentration ◽  
Plant Tolerance ◽  
Biotic And Abiotic Stress ◽  
Interaction Models ◽  
Biotic Stresses

Biotic stress causes immense damage to agricultural products worldwide and raises the risk of hunger in many areas. Plants themselves tolerate biotic stresses via several pathways, including pathogen-associated molecular patterns (PAMPs), which trigger immunity and plant resistance (R) proteins. On the other hand, humans use several non-ecofriendly methods to control biotic stresses, such as chemical applications. Compared with chemical control, melatonin is an ecofriendly compound that is an economical alternative strategy which can be used to protect animals and plants from attacks via pathogens. In plants, the bactericidal capacity of melatonin was verified against Mycobacterium tuberculosis, as well as multidrug-resistant Gram-negative and -positive bacteria under in vitro conditions. Regarding plant–bacteria interaction, melatonin has presented effective antibacterial activities against phytobacterial pathogens. In plant–fungi interaction models, melatonin was found to play a key role in plant resistance to Botrytis cinerea, to increase fungicide susceptibility, and to reduce the stress tolerance of Phytophthora infestans. In plant–virus interaction models, melatonin not only efficiently eradicated apple stem grooving virus (ASGV) from apple shoots in vitro (making it useful for the production of virus-free plants) but also reduced tobacco mosaic virus (TMV) viral RNA and virus concentration in infected Nicotiana glutinosa and Solanum lycopersicum seedlings. Indeed, melatonin has unique advantages in plant growth regulation and increasing plant resistance effectiveness against different forms of biotic and abiotic stress. Although considerable work has been done regarding the role of melatonin in plant tolerance to abiotic stresses, its role in biotic stress remains unclear and requires clarification. In our review, we summarize the work that has been accomplished so far; highlight melatonin’s function in plant tolerance to pathogens such as bacteria, viruses, and fungi; and determine the direction required for future studies on this topic.

scholarly journals Current Virulence of Pyrenophora teres on Barley in Western Australia

Plant Disease ◽  
2001 ◽  
Vol 85 (9) ◽  
pp. 960-966 ◽  
Author(s):  
Sanjiv Gupta ◽  
Robert Loughman
Keyword(s):  
Western Australia ◽  
Error Variance ◽  
Geographic Area ◽  
Australian Isolate ◽  
Pyrenophora Teres ◽  
Sources Of Resistance ◽  
Pathogenic Variation ◽  
Resistant Varieties ◽  
Significant Line ◽  
Spot Type

Studies on variation, occurrence, and distribution of virulence in Pyrenophora teres are helpful to identify effective sources of resistance that can be used for barley breeding in Western Australia. Seventy-nine isolates of Pyrenophora teres were collected from different barley fields of Western Australia in 1995-96. Seventy-four induced net type symptoms (P. teres f. teres) and five induced spot type symptoms (P. teres f. maculata). Net type isolate responses on 47 barley lines were similar to the range of responses induced by nine historical isolates collected in the region between 1975 and 1985. These net type isolates were classified into two distinct groups based on virulence to the cultivar Beecher. Isolates were further classified into eight groups based on minor pathogenic variation among the population. The virulence phenotype present in an eastern Australian isolate was not observed in any isolates collected from Western Australia. An analysis of variance on a subset of 12 net type isolates indicated a significant line × isolate interaction (P < 0.001), with the interaction term variance component four times larger than the error variance. Based on these studies, the virulence among net type isolates has remained stable in Western Australia for the last 19 years. Spot type isolates were collected from a wider geographic area than previously reported and varied in virulence based on response to barley line Herta. Variation in spot-type isolates is reported for the first time from the region. The results from this study are being used in the development of resistant varieties.

scholarly journals Effects of plastics and microplastics on aquatic organisms and human health

2020 ◽  
Vol 37 (4) ◽  
pp. 437-443
Author(s):  
Fevziye Nihan Bulat ◽  
Berna Kılınç
Keyword(s):  
Environmental Pollution ◽  
Human Health ◽  
Water Environment ◽  
Aquatic Organisms ◽  
Human Consumption ◽  
Aquatic Species ◽  
Food Network ◽  
The Subject ◽  
Day By Day

Today, plastics have been used in many areas and their use have been increasing day by day. This increase in the use of plastic causes environmental pollution as well as negatively affects organisms in the environment and therefore human health. Plastics reach to the water environment through different transport routes. Microplastics that have reached to the water environment are consumed by aquatic organisms. Microplastics in aquatic species (fish, mussels, shrimp, seals, etc.) were highlighted in many studies. Microplastics consumed by aquatic organisms are included in the food network, reaching as far as human consumption. Therefore, the importance of the subject have been emphasized, the evaluation of the studies on microplastics and the risks it poses have been examined in this compilation study which was carried out in order to raise awareness about this issue and to ensure that the necessary measures will be taken.

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