Correlations and Path Analysis in Segregating Cowpea Generations Regarding Biological Nitrogen Fixation

The objective of this research was to evaluate the correlations between variables related to the biological nitrogen fixation (BNF) in segregating generations of cowpea and to unfold these correlations in direct and indirect effects, through path analysis. An outdoor bench experiment was conducted at Carpina Experimental Sugarcane Station of, located at the Zona da Mata region of the State of the Pernambuco, Northeast of Brazil (Federal Rural University of Pernambuco), between March and April 2016. The seeds were planted in 20 cm × 30 cm polyethylene bags, using a substrate composed of a mixture of vermiculite and sand washed in a ratio of 1:1. Bradyrhizobium references, recommended for culture, were used as a mixture of two strains. Parental and F2, F3 and F4 generations were evaluated in a randomized block design with four replicates. Data collection was performed 45 days after the emergency (DAE). Phenotypic correlations and path analysis of the number of nodules per plant (NN), nodules dry mass (NDM), dry roots mass (DRM), dry mass of aerial part (DMAP), nodulation efficiency (NODE) and nitrogen accumulated in the aerial part (NAAP). The phenotypic correlations between the variables related to the BNF showed high magnitudes, demonstrating that there is a great influence of each of the variables on the others, furthermore the path analysis of the coefficients indicated that all the primary components (NN, NDM, DRM, DMAP and NODE) must be considered when it is desired to increase the NAAP in segregating generations of cowpea.

Genotypic and phenotypic correlations among coffee leaf rust symptoms of Arabica coffee genotypes in North Sumatra. Indonesia

Coffee leaf rust (CLR) is a pandemic and a serious threat for coffee sustainability in many coffee producing countries. To overcome this CLR, the world’s consensus is to use of resistant cultivars which can be created through coffee breeding program. This research aimed to study genotypic and phenotypic correlations between CLR symptoms of seven arabica coffee (Coffea arabica L.) genotypes that were selected from different districts of North Sumatra Province, Indonesia. This experimental research using a randomized complete block design with three replications was conducted at the experimental garden of the Faculty of Agriculture, Universitas HKBP Nommensen in Medan. The result of this study indicate that leaf rust severity (LRS) had a genotypic component variance of 86.8% which indicated that LRS was controlled more dominantly by plant genetics than other unknown factors. Severity indicated by LRS showed no genotypic and phenotypic correlation with dispersal indicated by branch rust incidence (BRI) and leaf rust incidence (LRI). BRI genotypically correlated with LRI. The results of this study could contribute to resistance coffee breeding for CLR.

Heritable Variation, Genetic and Phenotypic Correlations for Tuber Traits and Host Plant Resistance to Late Blight for Potato Breeding in Scandinavian Testing Sites

Potato breeding aims to improve crop productivity, quality and resilience based on heritable characteristics. Estimating the trait heritability and correlations—both genetic and phenotypic—among characteristics in a target population of environments allows us to define the best breeding method that leads to selection gains. Breeding clones (47) and released cultivars (209) were grown using simple lattice designs at three testing sites in northern and southern Sweden to estimate the best linear unbiased predictors (BLUPs) derived from mixed linear models for characteristics such as tuber weight (total and according to sizes), host plant resistance to late blight (caused by the oomycete Phytophthora infestans) and tuber quality (starch percentage based on specific gravity measurements and reducing sugars). There was significant heritable variation for all the characteristics investigated. Tuber starch percentage and total tuber weight were the traits with the highest broad-sense heritability (H2), while the weight for the smallest size (<40 mm) had the highest H2 among the different tuber categories. These results show the potential for further improving these traits for Scandinavia through recombination and selection in segregating offspring. The genetic and phenotypic correlations among the tuber weight characteristics were significant (p ≤ 0.05) irrespective of their sizes, but none were significant (p > 0.05) with tuber starch percentage. Host plant resistance to late blight was negatively and significantly associated with tuber weight and starch percentage, thereby showing the strong effects of this disease on the productivity and quality of the potatoes.

RUBINSTEIN-TEIBI SYNDROME

Rubinstein-Teibi syndrome (RTS) is a multisystem pathology characterized by mental retardation and delayed physical development combined with characteristic external manifestations that make up a recognizable picture of the disease. The literature review highlights the clinical manifestations of RTS, considers the issues of geno-phenotypic correlations and differential diagnostics, describes the possibilities and prospects of diagnostics and treatment, taking into account the results of modern research.

Estimation of genetic parameters and relationships between type traits and milk yield of Holstein cows in Turkey

ABSTRACT In this study, milk yield, reproductive yield, and type traits of 533 Holstein cows in the first lactation raised in 54 farms were examined. In the three-year study, phenotypic (rP) and genetic (rG) correlations between type traits and milk yield were estimated based on the variance elements and heritability of the type traits of Holstein cows in the first lactation. Linear identification and scoring systems have been applied to classify the cows according to type traits. Heritability and correlations were estimated with ASREML models. The type traits included stature, angularity, rump width, hocks, rear udder height, central ligament, teat length, body capacity, feet and legs, udder composite and final score for genetic correlations with 305-day milk yield were estimated as -0.49, -0.14, -0.93, 0.35, 0.40, 0.11, -0.65, 0.70, 0.31, 0.54, and 0.70, for phenotypic correlations were estimated as 0.28, 0.28, 0.30, 0.21, 0.35, 0.39, -0.06, 0.46, 0.48, 0.56, and 0.58 respectively. Among the phenotypic correlations between the type traits, especially the phenotypic correlations between the final score and various type traits were found to be high and significant. The fact that these traits are in high correlation with other traits and milk yield may enable these to be used as indirect selection criteria in the selection for milk yield.

PSXII-30 Genetic and phenotypic correlations for growth and resistance to gastrointestinal parasitism in meat goats and hair sheep

Genetic and phenotypic correlations for growth and response to parasite infection traits were estimated for growing male meat goats and hair sheep from different farms in the southcentral United States during three consecutive central performance tests (CPT). Data were collected for 7–10 wk after artificial infection with Haemonchus contortus, which included average daily gain (ADG), fecal egg count (FEC), packed cell volume (PCV), and immunoglobin (Ig) levels. Animals evaluated were selected randomly in year 1 and in years 2 and 3 progeny of CPT sires classified as highly or moderately resistant and included 46, 50, and 51 Boer, Kiko, and Spanish goats and 59, 61, 34, and 46 Dorper, Katahdin-farm A, Katahdin-farm B, and St. Croix sheep, respectively. Females were classified accordingly on-farm based on FEC and FAMACHA. Pedigree records included 4 and 10 full-sibs and 97 and 149 half-sibs for goats and sheep, respectively. Variance components and correlations were estimated by AIREML using WOMBAT with a multivariate animal model. The additive genetic correlation between FEC and PCV was negative for goats (r=-041, P &lt; 0.001) but positive for sheep (r=0.21, P = 0.004), whereas the phenotypic correlation between FEC and PCV was nonsignificant for goats but negative for sheep (r=-0.252, P &lt; 0.001). The genetic correlation between FEC and IgA was positive (r=0.39, P &lt; 0.001) for goats but nonsignificant (P = 0.439) for sheep, whereas those of FEC with IgM and IgG were both negative (r=-0.369 and -0.732 with IgM and r=-0.284 and -0.702 for goats and sheep, respectively; P &lt; 0.001). Genetic and phenotypic correlations between ADG and FEC were nonsignificant for both species. In conclusion, different relationships of FEC and PCV between species require careful attention during selection and the lack of relationship between ADG and FEC suggests that selection of growing male meat goats and hair sheep for resistance to internal parasitism will not adversely affect growth performance.

Improved Estimation of Phenotypic Correlations Using Summary Association Statistics

Estimating the phenotypic correlations between complex traits and diseases based on their genome-wide association summary statistics has been a useful technique in genetic epidemiology and statistical genetics inference. Two state-of-the-art strategies, Z-score correlation across null-effect single nucleotide polymorphisms (SNPs) and LD score regression intercept, were widely applied to estimate phenotypic correlations. Here, we propose an improved Z-score correlation strategy based on SNPs with low minor allele frequencies (MAFs), and show how this simple strategy can correct the bias generated by the current methods. The low MAF estimator improves phenotypic correlation estimation, thus it is beneficial for methods and applications using phenotypic correlations inferred from summary association statistics.

Live weight, Body condition score, body dimensions, and phenotypic correlations between them in sheep of Bulgarian dairy synthetic population

The aim of the present study was to establish live weight, Body condition score (BCS), body dimensions and phenotypic correlations between them in young female breeding animals of Bulgarian dairy synthetic population (BDSP). The object of research were 137 ewe lambs of the flock, bred at the Agricultural Institute in Stara Zagora for a period of 3 years. Live weight of animals and body dimensions were performed at 6, 9 and 18 months of age and Body condition score was assessed. In addition, the phenotypic dependences between indicators were calculated. The data were processed with Statistica software product. Based on the obtained results, it could be summarized that the live weight and bone system of the animals increased more intensively in the period from 6 to 9 months of age, which was accompanied by an increase in BCS. During the next period (after 9 months of age) there was a certain slowdown in the growth rate and a decrease in BCS, but an increase in live weight. The values of the two indicators at the age of 18 months however showed that the physiological condition of the animals was suitable for their inclusion in the breeding process. The highest values of phenotypic correlations were found between live weight, BCS and body dimensions at 6 months of age. At the next two ages (9 and 18 months), these dependencies declined. Live weight, body length, chest depth and croup width maintained a high level of correlation with the body volume. The highest phenotypic correlations between BCS and other indicators were established in animals at 6 months and the lowest ones at 9 months of age