Genetic and genomic characterization followed by single-step genomic evaluation of withers height in German Warmblood horses

Reliability of genomic predictions is influenced by the size and genetic composition of the reference population. For German Warmblood horses, compilation of a reference population has been enabled through the cooperation of five German breeding associations. In this study, preliminary data from this joint reference population were used to genetically and genomically characterize withers height and to apply single-step methodology for estimating genomic breeding values for withers height. Using data on 2113 mares and their genomic information considering about 62,000 single nucleotide polymorphisms (SNPs), analysis of the genomic relationship revealed substructures reflecting breed origin and different breeding goals of the contributing breeding associations. A genome-wide association study confirmed a known quantitative trait locus (QTL) for withers height on equine chromosome (ECA) 3 close to LCORL and identified a further significant peak on ECA 1. Using a single-step approach with a combined relationship matrix, the estimated heritability for withers height was 0.31 (SE = 0.08) and the corresponding genomic breeding values ranged from − 2.94 to 2.96 cm. A mean reliability of 0.38 was realized for these breeding values. The analyses of withers height showed that compiling a reference population across breeds is a suitable strategy for German Warmblood horses. The single-step method is an appealing approach for practical genomic prediction in horses, because not many genotypes are available yet and animals without genotypes can by this way directly contribute to the estimation system.

Automatic extraction of land cover statistics from satellite imagery by deep learning1

In this paper, we address the challenge of producing fully automated land cover estimates from satellite imagery through Deep Learning algorithms. We developed our system according to a tile-based, classify-and-count design. To implement the classification engine of the system, we adopted a cutting-edge Convolutional Neural Network model named Inception-V3, which we customized and trained for scene classification on the EuroSAT dataset. We tested and validated our system on two Sentinel-2 images representing quite different Italian territories (with an area of 751 km2 and 443 km2, respectively). Because no genuine ground-truth is available for the land cover of these sub-regional territories, we built a pseudo ground-truth by integrating land cover information from flagship European projects CORINE and LUCAS. A critical and careful analysis shows that our automatic land cover estimates are in good agreement with the pseudo ground-truth and offers extensive evidence of the remarkable segmentation ability of our system. The limits of our approach are also critically discussed in the paper and possible countermeasures are illustrated. When compared with traditional projects like CORINE and LUCAS, our automatic land cover estimation system exhibits three fundamental advantages: it can dramatically reduce production costs; it can allow delivering very timely and frequent land cover statistics; it can enable land cover estimation for very small territorial areas, well beyond the NUTS-2 level. As an additional outcome of land cover estimation, our system also automatically generates moderate resolution land cover maps that might be used in cartography projects as an agile first-level tool for map update or change detection purposes.

Economic Analysis of an Image-Based Beef Carcass Yield Estimation System in Korea

To minimize production costs, reduce mistakes, and improve consistency, modern-day slaughterhouses have turned to automated technologies for operations such as cutting, deboning, etc. One of the most vital operations in the slaughterhouse is carcass grading, usually performed manually by grading staff, which creates a bottleneck in terms of production speed and consistency. To speed up the carcass grading process, we developed an online system that uses image analysis and statistical tools to estimate up to 23 key yield parameters. A thorough economic analysis is required to aid slaughterhouses in making informed decisions about the risks and benefits of investing in the system. We therefore conducted an economic analysis of the system using a cost-benefit analysis (the methods considered were net present value (NPV), internal rate of return (IRR), and benefit/cost ratio (BCR)) and sensitivity analysis. The benefits considered for analysis include labor cost reduction and gross margin improvement arising from optimizing breeding practices with the use of the data obtained from the system. The cost-benefit analysis of the system resulted in an NPV of approximately 310.9 million Korean Won (KRW), a BCR of 1.72, and an IRR of 22.28%, which means the benefits outweigh the costs in the long term.

Attractive Force Estimation of a Magnetic Adsorption Unit for Inspection UAVs

This paper presents an attractive force estimation system and an automatic activation system for an electropermanent magnet (EPM) for an inspection UAV. Adsorption to infrastructures for inspection at a distance is extremely difficult to perform safely because the operator cannot detect the state of adsorption of the drone equipped with a magnetic adsorption device. Therefore, in this paper, we clarify the relationship between the magnetic flux density and attractive force of the EPM through experiments, and develop an estimation algorithm for the attractive force based on the results. An automatic activation system, using the induced voltage in the coil when the EPM approaches the magnetic substance, is developed and mounted on a quadrotor for a flight experiment along with the estimation system for the attractive force. The developed system is verified using flight and adsorption experiments on the quadrotor.

Magnetic Field-Based Vehicle Positioning System in Long Tunnel Environment

Recently, long tunnels are becoming more prevalent in Korea, and exits are added at certain sections of the tunnels. Thus, a navigation system should correctly guide the user toward the exit; however, adequate guidance is not delivered because the global navigation satellite system (GNSS) signal is not received inside a tunnel. Therefore, we present an accurate position estimation system using a magnetic field for vehicles passing through a tunnel. The position can be accurately estimated using the magnetic sensor of a smartphone with an appropriate attitude estimation and magnetic sensor calibration. Position estimation was realized by attaching the smartphone on the dashboard during navigation and calibrating the sensors using position information from the GNSS and magnetic field database before entering the tunnel. This study used magnetic field sequence data to estimate vehicle positions inside a tunnel. Furthermore, subsequence dynamic time warping was applied to compare the magnetic field data stored in the buffer with the magnetic field database, and the feasibility and performance of the proposed system was reviewed through an experiment in an actual tunnel. The analysis of the position estimation results confirmed that the proposed system could appropriately deliver tunnel navigation.

A Low-Cost, Autonomous Gait Detection and Estimation System for Analyzing Gait Impairments in Mice

With the advancement in imaging technology, many commercial systems have been developed for performing motion analysis in mice. However, available commercial systems are expensive and use proprietary software. In this paper, we describe a low-cost, camera-based design of an autonomous gait acquisition and analysis system for inspecting gait deficits in C57BL/6 mice. Our system includes video acquisition, autonomous gait-event detection, gait-parameter extraction, and result visualization. We provide a simple, user-friendly, step-by-step detailed methodology to apply well-known image processing techniques for detecting mice footfalls and calculating various gait parameters for analyzing gait abnormalities in healthy and neurotraumatic mice. The system was used in a live animal study for assessing recovery in a mouse model of Parkinson’s disease. Using the videos acquired in the study, we validate the performance of our system with receiver operating characteristic (ROC) and Hit : Miss : False (H : M : F) detection analyses. Our system correctly detected the mice footfalls with an average H : M : F score of 92.1 : 2.3 : 5.6. The values for the area under an ROC curve for all the ROC plots are above 0.95, which indicates an almost perfect detection model. The ROC and H : M : F analyses show that our system produces accurate gait detection. The results observed from the gait assessment study are in agreement with the known literature. This demonstrates the practical viability of our system as a gait analysis tool.