scholarly journals Nonlinear shifts in infectious rust disease due to climate change

2021 ◽  
Vol 12 (1) ◽  
Author(s):  
Joan Dudney ◽  
Claire E. Willing ◽  
Adrian J. Das ◽  
Andrew M. Latimer ◽  
Jonathan C. B. Nesmith ◽  
...  

AbstractRange shifts of infectious plant disease are expected under climate change. As plant diseases move, emergent abiotic-biotic interactions are predicted to modify their distributions, leading to unexpected changes in disease risk. Evidence of these complex range shifts due to climate change, however, remains largely speculative. Here, we combine a long-term study of the infectious tree disease, white pine blister rust, with a six-year field assessment of drought-disease interactions in the southern Sierra Nevada. We find that climate change between 1996 and 2016 moved the climate optimum of the disease into higher elevations. The nonlinear climate change-disease relationship contributed to an estimated 5.5 (4.4–6.6) percentage points (p.p.) decline in disease prevalence in arid regions and an estimated 6.8 (5.8–7.9) p.p. increase in colder regions. Though climate change likely expanded the suitable area for blister rust by 777.9 (1.0–1392.9) km2 into previously inhospitable regions, the combination of host-pathogen and drought-disease interactions contributed to a substantial decrease (32.79%) in mean disease prevalence between surveys. Specifically, declining alternate host abundance suppressed infection probabilities at high elevations, even as climatic conditions became more suitable. Further, drought-disease interactions varied in strength and direction across an aridity gradient—likely decreasing infection risk at low elevations while simultaneously increasing infection risk at high elevations. These results highlight the critical role of aridity in modifying host-pathogen-drought interactions. Variation in aridity across topographic gradients can strongly mediate plant disease range shifts in response to climate change.

2016 ◽  
Vol 371 (1709) ◽  
pp. 20150458 ◽  
Author(s):  
Daniel P. Bebber ◽  
Ángela Delgado Castillo ◽  
Sarah J. Gurr

Many fungal plant diseases are strongly controlled by weather, and global climate change is thus likely to have affected fungal pathogen distributions and impacts. Modelling the response of plant diseases to climate change is hampered by the difficulty of estimating pathogen-relevant microclimatic variables from standard meteorological data. The availability of increasingly sophisticated high-resolution climate reanalyses may help overcome this challenge. We illustrate the use of climate reanalyses by testing the hypothesis that climate change increased the likelihood of the 2008–2011 outbreak of Coffee Leaf Rust (CLR, Hemileia vastatrix ) in Colombia. We develop a model of germination and infection risk, and drive this model using estimates of leaf wetness duration and canopy temperature from the Japanese 55-Year Reanalysis (JRA-55). We model germination and infection as Weibull functions with different temperature optima, based upon existing experimental data. We find no evidence for an overall trend in disease risk in coffee-growing regions of Colombia from 1990 to 2015, therefore, we reject the climate change hypothesis. There was a significant elevation in predicted CLR infection risk from 2008 to 2011 compared with other years. JRA-55 data suggest a decrease in canopy surface water after 2008, which may have helped terminate the outbreak. The spatial resolution and accuracy of climate reanalyses are continually improving, increasing their utility for biological modelling. Confronting disease models with data requires not only accurate climate data, but also disease observations at high spatio-temporal resolution. Investment in monitoring, storage and accessibility of plant disease observation data are needed to match the quality of the climate data now available. This article is part of the themed issue ‘Tackling emerging fungal threats to animal health, food security and ecosystem resilience’.


2007 ◽  
Vol 5 (22) ◽  
pp. 525-531 ◽  
Author(s):  
Neal Evans ◽  
Andreas Baierl ◽  
Mikhail A Semenov ◽  
Peter Gladders ◽  
Bruce D.L Fitt

Climate change affects plants in natural and agricultural ecosystems throughout the world but little work has been done on the effects of climate change on plant disease epidemics. To illustrate such effects, a weather-based disease forecasting model was combined with a climate change model predicting UK temperature and rainfall under high- and low-carbon emissions for the 2020s and 2050s. Multi-site data collected over a 15-year period were used to develop and validate a weather-based model forecasting severity of phoma stem canker epidemics on oilseed rape across the UK. This was combined with climate change scenarios to predict that epidemics will not only increase in severity but also spread northwards by the 2020s. These results provide a stimulus to develop models to predict the effects of climate change on other plant diseases, especially in delicately balanced agricultural or natural ecosystems. Such predictions can be used to guide policy and practice in adapting to effects of climate change on food security and wildlife.


Author(s):  
Audrey McCombs ◽  
Diane Debinski

Climate change presents unique challenges to high-altitude, high-latitude flying insects such as butterflies, bees, and flies. Models predict that climate change will cause general range shifts toward the poles and high elevations (Parmesan and Yohe 2003, Root et al. 2003) and empirical studies confirm that these range shifts are occurring (Parmesan et al. 1999, Kerr et al. 2015). As the earth warms, animals already living at high elevations and/or high latitudes may have nowhere to go. Furthermore, the body temperature of insects is dependent on ambient temperatures, and therefore many aspects of their ecology and general biology (development, growth, survival, dispersal, mating) may be stressed by or incompatible with a changing climate. Finally, animal flight at altitude involves substantial aerodynamic and physiological challenges, and significant reductions in air density and oxygen constrain flight at higher elevations (Dillon and Dudley 2015). Moving up in elevation therefore may not be an option for some high-altitude fliers.


2009 ◽  
Vol 45 (No. 4) ◽  
pp. 125-139 ◽  
Author(s):  
R.D. Martyn

Plant diseases can be traced back almost as far as recorded history. Numerous ancient writings describe plagues and blasts destroying crops and modern civilization still faces many plant disease challenges. Plant pathology has its roots in botany and notable scientists such as Tillet, Prevost, and deBary already had concluded microscopic organisms could cause plant diseases before Robert Koch established the rules of proof of pathogenicity with sheep anthrax. Plant pathologists can be credited with helping improve crop yields and food production throughout the world. However, at a time when there are increasing challenges to crop production, some that potentially may increase the severity or distribution of plant diseases, the training of future plant pathologists appears to be declining, at least in the United States. The ability of the U.S. Land Grant University (USLGU) system to attract and train future generations of plant pathologists may be at risk. Recent data from university plant pathology departments collected by The American Phytopathological Society (APS) documents a decline in the number of students completing advanced degrees in plant pathology, departments with fewer faculty with a diverse expertise in applied plant pathology, fewer stand-alone, single discipline departments of plant pathology, a reduced ability of many departments to offer specific curricular aspects of plant pathology, and a demographic profile that casts an ominous prediction for an unusually large number of faculty retirements over the next decade. The impact of these factors could be a shortage of highly skilled, applied plant pathologists in the U.S. in coming years. The affect also may be felt globally as fewer international students may receive pre-doctoral and post-doctoral training in plant pathology in the U.S. as faculty retire and are not replaced. On the other hand, this likely will create greater opportunities for universities around the world to take leadership in many aspects of plant pathology education. While a decline in students and young faculty trained in applied and field-level specialties of plant pathology (mycology, bacteriology, plant nematology, forest pathology, epidemiology, etc.) is occurring, those trained in the cellular and molecular host-pathogen interactions specialties appear to be increasing. Many plant pathology faculty hired at USLGUs in the last decade are trained in molecular biology and received their Ph.D. degree in a field other than plant pathology. They are now applying those skills to research numerous aspects of host-pathogen interactions of model pathosystems. A shift to a greater research emphasis on molecular host-pathogen interactions over the last decade is evidenced by the number of research articles published in the three APS journals; Plant Disease, Phytopathology and Molecular Plant-Microbe Interactions (MPMI). From 1985 to 2007, there has been a decline in the number of articles published in Plant Disease (–29%) and Phytopathology (–36%) and a steady increase in those published in MPMI since its inception in 1990 (+111%). With new research tools come new research questions. The tools of molecular biology have allowed us to look deeper into questions than ever before and provided us with a perspective not before seen. As we dissect and decode the genomes of the world’s most notorious plant pathogens we get closer and closer to alleviating the global losses and human suffering caused by plant diseases. New “designer crops” with engineered traits for drought and cold tolerance, pest resistance, increased levels of micronutrients, healthier oils such as omega fatty acids, and plant-derived pharmaceuticals are all on the horizon. Research in the future likely will focus on new problems, traditionally seen as outside the discipline of plant pathology. The impact of climate change on plant diseases will be significant. As many parts of the world become warmer and drier some plant diseases likely will increase in severity. Pathogens are likely to migrate and survive in more northern latitudes greatly expanding their range and diseases exacerbated by abiotic stresses such as drought and salinity will increase. Plant pathology will continue to evolve as a multidisciplinary science. These changes will open up many new research opportunities. Plant pathology will play a bigger role in global food security. Research into the molecular and cellular interactions of symbiotic and endophytic organisms will help provide answers to food-borne illnesses caused by E. coli and Salmonella and how these and other human pathogens become established in plants in the field. Plant pathologists will team up with biomedical and aeronautical engineers, nanotechnologists, and computer scientists to develop microsensory technology to detect the introduction and spread of pathogens for biosecurity, diagnostics and epidemiological modeling purposes. Traditional areas of plant disease management and the use of biologicals for disease control also will benefit from a better understanding of the molecular and cellular processes and the similarity of virulence mechanisms and pathogen effectors between plant, insect, and vertebrate pathogens likely will bring new insights into human diseases. And last, but not least, there likely will be a resurgence in plant disease management and epidemiological research as the world’s dependence on biofuels increases and results in new diseases on intensively cultivated plant species used for biomass production.


Author(s):  
Diego Pires Ferraz Trindade ◽  
Meelis Pärtel ◽  
Carlos Pérez Carmona ◽  
Tiina Randlane ◽  
Juri Nascimbene

AbstractMountains provide a timely opportunity to examine the potential effects of climate change on biodiversity. However, nature conservation in mountain areas have mostly focused on the observed part of biodiversity, not revealing the suitable but absent species—dark diversity. Dark diversity allows calculating the community completeness, indicating whether sites should be restored (low completeness) or conserved (high completeness). Functional traits can be added, showing what groups should be focused on. Here we assessed changes in taxonomic and functional observed and dark diversity of epiphytic lichens along elevational transects in Northern Italy spruce forests. Eight transects (900–1900 m) were selected, resulting in 48 plots and 240 trees, in which lichens were sampled using four quadrats per tree (10 × 50 cm). Dark diversity was estimated based on species co-occurrence (Beals index). We considered functional traits related to growth form, photobiont type and reproductive strategy. Linear and Dirichlet regressions were used to examine changes in taxonomic metrics and functional traits along gradient. Our results showed that all taxonomic metrics increased with elevation and functional traits of lichens differed between observed and dark diversity. At low elevations, due to low completeness and harsh conditions, both restoration and conservation activities are needed, focusing on crustose species. Towards high elevations, conservation is more important to prevent species pool losses, focusing on macrolichens, lichens with Trentepohlia and sexual reproduction. Finally, dark diversity and functional traits provide a novel tool to enhance nature conservation, indicating particular threatened groups, creating windows of opportunities to protect species from both local and regional extinctions.


2020 ◽  
Vol 5 (1) ◽  
pp. 404-440 ◽  
Author(s):  
Mehrdad Alizadeh ◽  
Yalda Vasebi ◽  
Naser Safaie

AbstractThe purpose of this article was to give a comprehensive review of the published research works on biological control of different fungal, bacterial, and nematode plant diseases in Iran from 1992 to 2018. Plant pathogens cause economical loss in many agricultural products in Iran. In an attempt to prevent these serious losses, chemical control measures have usually been applied to reduce diseases in farms, gardens, and greenhouses. In recent decades, using the biological control against plant diseases has been considered as a beneficial and alternative method to chemical control due to its potential in integrated plant disease management as well as the increasing yield in an eco-friendly manner. Based on the reported studies, various species of Trichoderma, Pseudomonas, and Bacillus were the most common biocontrol agents with the ability to control the wide range of plant pathogens in Iran from lab to the greenhouse and field conditions.


2021 ◽  
Vol 7 (3) ◽  
pp. 202
Author(s):  
Johannes Delgado-Ospina ◽  
Junior Bernardo Molina-Hernández ◽  
Clemencia Chaves-López ◽  
Gianfranco Romanazzi ◽  
Antonello Paparella

Background: The role of fungi in cocoa crops is mainly associated with plant diseases and contamination of harvest with unwanted metabolites such as mycotoxins that can reach the final consumer. However, in recent years there has been interest in discovering other existing interactions in the environment that may be beneficial, such as antagonism, commensalism, and the production of specific enzymes, among others. Scope and approach: This review summarizes the different fungi species involved in cocoa production and the cocoa supply chain. In particular, it examines the presence of fungal species during cultivation, harvest, fermentation, drying, and storage, emphasizing the factors that possibly influence their prevalence in the different stages of production and the health risks associated with the production of mycotoxins in the light of recent literature. Key findings and conclusion: Fungi associated with the cocoa production chain have many different roles. They have evolved in a varied range of ecosystems in close association with plants and various habitats, affecting nearly all the cocoa chain steps. Reports of the isolation of 60 genera of fungi were found, of which only 19 were involved in several stages. Although endophytic fungi can help control some diseases caused by pathogenic fungi, climate change, with increased rain and temperatures, together with intensified exchanges, can favour most of these fungal infections, and the presence of highly aggressive new fungal genotypes increasing the concern of mycotoxin production. For this reason, mitigation strategies need to be determined to prevent the spread of disease-causing fungi and preserve beneficial ones.


2021 ◽  
Vol 11 (8) ◽  
pp. 710-715 ◽  
Author(s):  
Thomas M. Chaloner ◽  
Sarah J. Gurr ◽  
Daniel P. Bebber

2021 ◽  
Vol 11 (5) ◽  
pp. 2282
Author(s):  
Masudulla Khan ◽  
Azhar U. Khan ◽  
Mohd Abul Hasan ◽  
Krishna Kumar Yadav ◽  
Marina M. C. Pinto ◽  
...  

In the present era, the global need for food is increasing rapidly; nanomaterials are a useful tool for improving crop production and yield. The application of nanomaterials can improve plant growth parameters. Biotic stress is induced by many microbes in crops and causes disease and high yield loss. Every year, approximately 20–40% of crop yield is lost due to plant diseases caused by various pests and pathogens. Current plant disease or biotic stress management mainly relies on toxic fungicides and pesticides that are potentially harmful to the environment. Nanotechnology emerged as an alternative for the sustainable and eco-friendly management of biotic stress induced by pests and pathogens on crops. In this review article, we assess the role and impact of different nanoparticles in plant disease management, and this review explores the direction in which nanoparticles can be utilized for improving plant growth and crop yield.


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