To be or not to be cell autonomous? Autophagy says both

2017 ◽  
Vol 61 (6) ◽  
pp. 649-661 ◽  
Author(s):  
Nina Fenouille ◽  
Anna Chiara Nascimbeni ◽  
Joëlle Botti-Millet ◽  
Nicolas Dupont ◽  
Etienne Morel ◽  
...  

Although cells are a part of the whole organism, classical dogma emphasizes that individual cells function autonomously. Many physiological and pathological conditions, including cancer, and metabolic and neurodegenerative diseases, have been considered mechanistically as cell-autonomous pathologies, meaning those that damage or defect within a selective population of affected cells suffice to produce disease. It is becoming clear, however, that cells and cellular processes cannot be considered in isolation. Best known for shuttling cytoplasmic content to the lysosome for degradation and repurposing of recycled building blocks such as amino acids, nucleotides, and fatty acids, autophagy serves a housekeeping function in every cell and plays key roles in cell development, immunity, tissue remodeling, and homeostasis with the surrounding environment and the distant organs. In this review, we underscore the importance of taking interactions with the microenvironment into consideration while addressing the cell autonomous and non-autonomous functions of autophagy between cells of the same and different types and in physiological and pathophysiological situations.

2021 ◽  
Vol 10 (6) ◽  
pp. 1239
Author(s):  
Alexandru Cojocaru ◽  
Emilia Burada ◽  
Adrian-Tudor Bălșeanu ◽  
Alexandru-Florian Deftu ◽  
Bogdan Cătălin ◽  
...  

As the average age and life expectancy increases, the incidence of both acute and chronic central nervous system (CNS) pathologies will increase. Understanding mechanisms underlying neuroinflammation as the common feature of any neurodegenerative pathology, we can exploit the pharmacology of cell specific ion channels to improve the outcome of many CNS diseases. As the main cellular player of neuroinflammation, microglia play a central role in this process. Although microglia are considered non-excitable cells, they express a variety of ion channels under both physiological and pathological conditions that seem to be involved in a plethora of cellular processes. Here, we discuss the impact of modulating microglia voltage-gated, potential transient receptor, chloride and proton channels on microglial proliferation, migration, and phagocytosis in neurodegenerative diseases.


2020 ◽  
Vol 1 (3) ◽  
pp. 275-289
Author(s):  
Alessa Hinzmann ◽  
Selina Sophie Druhmann ◽  
Harald Gröger

Currently, investigations of polymer-building blocks made from biorenewable feedstocks such as, for example, fatty acids, are of high interest for the chemical industry. An alternative synthesis of nitrile-substituted aliphatic carboxylic acids as precursors for ω-amino acids, which are useful to produce polymers, was investigated starting from biorenewable fatty acids. By hydroformylation of unsaturated fatty acids or unsaturated acids being accessible from unsaturated fatty acids by cross-metathesis reactions, aldehydes are formed. In this work, the hydroformylation of such unsaturated acids led to the formation of the corresponding aldehydes, which were afterwards converted with hydroxylamine to aldoximes. Subsequent dehydration by an aldoxime dehydratase as a biocatalyst or by CuII acetate led to the desired nitriles. Within this work, C7-, C9- and C11-carboxylic acids with a terminal nitrile functionality as well as a branched nitrile-functionalized stearate derivative were synthesized by means of this approach. As these nitriles serve as precursors for amino acids being suitable for polymerization, this work represents an alternative synthetic access to polyamide precursors, which starts directly from unsaturated fatty acids as biorenewable resources and avoids harsh reaction conditions as well as and by-product formation.


2005 ◽  
Vol 33 (5) ◽  
pp. 1182-1185 ◽  
Author(s):  
J. Garbarino ◽  
S.L. Sturley

Fatty acids and sterols are vital components of all eukaryotic cells. Both are used as building blocks for numerous cellular processes such as membrane biosynthesis or hormone production (sterols). Furthermore, these compounds elicit a variety of effects intracellularly as they can act as signalling molecules and regulate gene expression. The metabolism of fatty acids and sterols represents a very intricate network of pathways that are regulated in a precise manner in order to maintain lipid homoeostasis within a cell. Using the budding yeast Saccharomyces cerevisiae as a model system, we touch upon some of the aspects of achieving and maintaining this lipid homoeostasis.


2019 ◽  
Vol 9 (1) ◽  

Protein structure is a hot topic, not only to the specialist, but with others like the physicists. So this review is targeting those who are not biologists and have to deal with the protein in their research. In this review we travel with the protein structures from the amino acids and its classifications, and how the polypeptide chain is formed from these building blocks up to the final 3D structure. We introduced the secondary structure species like helices with its different types and how it is formed; also the beta sheet formation and types are explained briefly. Finally the tertiary and quaternary structures are presented. The approaches of molecular modeling as well as other important computational methods present significant contribution to studying proteins.


2021 ◽  
Vol 4 (11(75)) ◽  
pp. 45-58
Author(s):  
O. Shatova ◽  
S. Zuikov ◽  
A. Zabolotneva ◽  
I. Mikin ◽  
D. Bril ◽  
...  

The modern diseases of civilization include obesity, diabetes mellitus or insulin resistance, atherosclerosis, neurodegenerative and oncological diseases. Much more often, a modern person makes a choice in favor of tasty and high-calorie food, which is not standard in terms of the content of vitamins, amino acids, fatty acids and minerals. It is difficult to imagine that such a chronic deficiency of essential molecules could be beneficial for the evolution of humanity. Rather, on the contrary, we observe a number of metabolic changes, including those due to dysmicroelementosis, which undoubtedly lead to the development of various diseases of civilization. In this review, we presented the key functions of micronutrients and pathological conditions associated with their deficiency.


2018 ◽  
Vol 48 (5) ◽  
pp. 2103-2113 ◽  
Author(s):  
Qiye Wang ◽  
Xia Xiong ◽  
Xiaocheng Wang ◽  
Qiang Tu ◽  
Jianzhong Li ◽  
...  

Background/Aims: Intestinal morphology and the types of enterocytes are changed in piglets during the suckling period, but it is unclear whether these changes are associated with metabolic changes in epithelium. The present study was conducted to test the hypothesis that glucose, fatty acids, and amino acid metabolism in differentiated piglet enterocytes changed during suckling. Methods: Twenty-four piglets (Duroc × [Landrace × Yorkshire]) from 8 litters (3 piglets/litter) were selected. A single piglet from each litter was randomly selected and euthanized at days 7, 14, and 21. Differentiated enterocytes (DE) were isolated from their mid-jejunum. Isobaric tags for relative and absolute quantification and subsequent liquid chromatography-tandem mass spectrometry were used to identify and measure protein synthesis. Results: The results showed that various activities, including: cellular processes; metabolic processes; biological regulation; pigmentation; and, localization, in DEs changed during suckling. Metabolic process analyses revealed that protein expression related to glycolysis and citrate cycle was decreased from day 7 to day 14. The number of differentiated enterocytes of 21 d piglets increased compared to 7 d piglets. Most of the proteins involved in fatty acid and amino acids metabolism had decreased DE expression between day 7 and day 14. Some, but not all, detected proteins down-regulated in DEs of 21 day piglets compared to 7 day piglets. Conclusion: These results indicate that glucose, fatty acids, and amino acids metabolism changed during suckling. This may provide useful information for designing feed formulas and regulating piglet intestinal growth and development.


2012 ◽  
Vol 2012 ◽  
pp. 1-16 ◽  
Author(s):  
Riya Shanbhag ◽  
Guang Shi ◽  
Jarungjit Rujiviphat ◽  
G. Angus McQuibban

Mitochondria are highly dynamic organelles that are important for many diverse cellular processes, such as energy metabolism, calcium buffering, and apoptosis. Mitochondrial biology and dysfunction have recently been linked to different types of cancers and neurodegenerative diseases, most notably Parkinson’s disease. Thus, a better understanding of the quality control systems that maintain a healthy mitochondrial network can facilitate the development of effective treatments for these diseases. In this perspective, we will discuss recent advances on two mitochondrial quality control pathways: the UPS and mitophagy, highlight how new players may be contributing to regulate these pathways. We believe the proteases involved will be key and novel regulators of mitochondrial quality control, and this knowledge will provide insights into future studies aimed to combat neurodegenerative diseases.


2021 ◽  
Vol 11 (17) ◽  
pp. 7778
Author(s):  
Liege A. Pascoalino ◽  
Filipa S. Reis ◽  
Lillian Barros ◽  
Manuel Ângelo Rodrigues ◽  
Carlos M. Correia ◽  
...  

The increasing interest in natural foods with functional effects demands progressively higher production levels. Nonetheless, there is an orientation towards practicing more sustainable agriculture, free from environmentally harmful pesticides and fertilizers. Plant biostimulants, a class of bio-based agriculture products designed to improve crop development, represent a feasible alternative to chemical fertilizers, or, at least, an effective way of reducing the employed quantities. Herein, different types of plant biostimulants compatible with organic farming (Phytoalgae, Foliar B, Amino Acids, Soil B, Fitoalgas Green® and Sprint Plus®) were tested in two of the most important nut products worldwide: almonds and hazelnuts, which were tested for nutritional parameters, fatty acids profiles and tocopherols contents. Overall, the most notorious effects in almond samples were obtained with phytoalgae (seaweed Ascophyllum nodosum extracts), particularly reflected in the upraising around 10% of γ-tocopherol and β-tocopherol contents. Likewise, hazelnuts treated with NPK + phytoalgae were also characterized by an increase of almost 18% in tocopherols levels, while treatment with NPK alone induced 15.1% higher percentage of linoleic acid.


2018 ◽  
Vol 21 (3) ◽  
pp. 433 ◽  
Author(s):  
Fronthea Swastawati ◽  
Ima Wijayanti ◽  
Suminto Suminto ◽  
Dwi Yanuar Budi Prasetyo

Galantin milkfish is one of the fish diversification products that can be used as a source of nutrition for the community with the specific appearance. To increase the level of product acceptance mainly aroma, liquid smoke is added as a flavoring agent that is safe to consume. This study aimed to determine the effect of the addition of different types of liquid smoke with appropriate concentrations on nutritional profiles (amino acids and fatty acids) and the quality (proximate and hedonic) of galantin milkfish. Experimental design of factorial was used in this research with three different types of liquid smoke, namely redestilation (R), filtration (F), and microencapsulation (M). The concentrations of the three types of liquid smoke usedwere 1% (1), 2% (2), and 3% (3) respectively. The results showed that the influence of the three types of liquid smoke and different concentrations significantly affected the profile of amino acids, fatty acids, moisture content, protein, fat, carbohydrates, energy and hedonic values   of milkfish galantin (p&lt;0.05). The dominant amino acid in the product was  glutamic acid, while the highest EPA and DHA contents were respectively in F1 and M1 treatments. Water content of milk fish galantin was  69.82% -72.75%, protein 14.56% -16.73%, fat 4.03% -6.14%, ash 1.62% -2.84%, carbohydrates 2.86% -3.58%, and energy 111.55-138.90 Kal/100 g. The<br />results of the hedonic analysis showed that all the products produced were favored by the panelists.


2021 ◽  
Vol 17 ◽  
Author(s):  
Syed Tufail Hussain Sherazi ◽  
Sarfaraz Ahmed Mahesar ◽  
Sirajuddin ◽  
Xiuzhu Yu

Background: The selection of capping agent depends on the method of synthesis, nature of nanoparticles (NPs), and type of the compounds to be analyzed. Therefore, different types of capping agents such as surfactants, drugs, amino acids, fatty acids, and polymers are used to increase stability of NPs, avoid aggregation, keeping NPs away from one another, and achieve desired morphology as well as the size of NPs. Introduction: Recently, the fabrication nanoparticle has been extensively carried out using chemical synthetic route and a wide range of material. In this review, a comprehensive assessment of the colorimetric and fluorescent sensing of metal nanoparticles using different capped agents such as surfactants, drugs, amino acids, fatty acids, and polymers has been summarized for the present and future strategies. Method: For the synthesis of metal nanoparticles, different methods, metals and a variety of capping agents are used to obtain new properties and to explore opportunities of innovative applications. Result: Capping agents perform their significant role as stabilizers to avoid the over-growth and coagulation of nanoparticles. Conclusion: Capping agents play an essential role in the colorimetric and fluorescent sensing of metal nanoparticles for particular analytes.


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