Impact of Sterilization Methods on the Seeding Ability of Human Tau Proteopathic Seeds

Author(s):  
Analiese R Fernandes ◽  
Simon Dujardin ◽  
Anastasie Maté de Gérando ◽  
Bradley T Hyman ◽  
Matthew P Frosch

Abstract The protein tau, when misfolded in neurodegenerative diseases, has several prion-like properties including being able to spread by cell-to-cell transfer, induce templated seeding, and exist in distinct conformational strains. These properties of transmission may present health hazards when lesion-containing biospecimens are used in research and neuropathology laboratories. We evaluated the impact standard sterilization and cleaning methods have on the capacity of tau seeds to induce aggregation. We employed a previously developed, highly sensitive FRET-based biosensor assay to assess remnant tau seeding after exposure to these procedures. For tau species derived from human Alzheimer disease tissue (brain homogenate and sarkosyl-insoluble fibrils), both autoclaving and incubation in 90.6% formic acid were sufficient to reduce tau bioactivity. By contrast, boiling was not always effective in completely blocking bioactivity in the seeding assay. Notably, only formic acid incubation was able to produce a similar reduction in tissue from a P301L mutant tau mouse model of tauopathy. Our study highlights nuances in methods for inactivation of tau seeding which may support adapted tissue processing procedures, especially in research settings. These findings also highlight the importance of universal precautions when handling human neuropathological and research laboratory materials.

Author(s):  
Lorenzo Cangiano ◽  
Sabrina Asteriti

AbstractIn the vertebrate retina, signals generated by cones of different spectral preference and by highly sensitive rod photoreceptors interact at various levels to extract salient visual information. The first opportunity for such interaction is offered by electrical coupling of the photoreceptors themselves, which is mediated by gap junctions located at the contact points of specialised cellular processes: synaptic terminals, telodendria and radial fins. Here, we examine the evolutionary pressures for and against interphotoreceptor coupling, which are likely to have shaped how coupling is deployed in different species. The impact of coupling on signal to noise ratio, spatial acuity, contrast sensitivity, absolute and increment threshold, retinal signal flow and colour discrimination is discussed while emphasising available data from a variety of vertebrate models spanning from lampreys to primates. We highlight the many gaps in our knowledge, persisting discrepancies in the literature, as well as some major unanswered questions on the actual extent and physiological role of cone-cone, rod-cone and rod-rod communication. Lastly, we point toward limited but intriguing evidence suggestive of the ancestral form of coupling among ciliary photoreceptors.


2018 ◽  
Vol 146 (2) ◽  
pp. 599-622 ◽  
Author(s):  
David D. Flagg ◽  
James D. Doyle ◽  
Teddy R. Holt ◽  
Daniel P. Tyndall ◽  
Clark M. Amerault ◽  
...  

Abstract The Trident Warrior observational field campaign conducted off the U.S. mid-Atlantic coast in July 2013 included the deployment of an unmanned aerial system (UAS) with several payloads on board for atmospheric and oceanic observation. These UAS observations, spanning seven flights over 5 days in the lowest 1550 m above mean sea level, were assimilated into a three-dimensional variational data assimilation (DA) system [the Naval Research Laboratory Atmospheric Variational Data Assimilation System (NAVDAS)] used to generate analyses for a numerical weather prediction model [the Coupled Ocean–Atmosphere Mesoscale Prediction System (COAMPS)] with a coupled ocean model [the Naval Research Laboratory Navy Coastal Ocean Model (NCOM)]. The impact of the assimilated UAS observations on short-term atmospheric prediction performance is evaluated and quantified. Observations collected from 50 radiosonde launches during the campaign adjacent to the UAS flight paths serve as model forecast verification. Experiments reveal a substantial reduction of model bias in forecast temperature and moisture profiles consistently throughout the campaign period due to the assimilation of UAS observations. The model error reduction is most substantial in the vicinity of the inversion at the top of the model-estimated boundary layer. Investigations reveal a consistent improvement to prediction of the vertical position, strength, and depth of the boundary layer inversion. The relative impact of UAS observations is explored further with experiments of systematic denial of data streams from the NAVDAS DA system and removal of individual measurement sources on the UAS platform.


2017 ◽  
Vol 32 (2) ◽  
pp. 135-140 ◽  
Author(s):  
M. Ryan Miller ◽  
Jason K. Norsworthy

AbstractTo address recent concerns related to auxin herbicide drift onto soybean, a study was developed to understand the susceptibility of the reproductive stage of soybean to a new auxin herbicide compared with dicamba. Florpyrauxifen-benzyl is under development as the second herbicide in a new structural class of synthetic auxins, the arylpicolinates. Field studies were conducted to (1) evaluate and compare reproductive soybean injury and yield following applications of florpyrauxifen-benzyl or dicamba across various concentrations and reproductive growth stages and (2) determine whether low-rate applications of florpyrauxifen-benzyl or dicamba to soybean in reproductive stages would have similar effect on the progeny of the affected plants. Soybean were treated with 0, 1/20, or 1/160, of the 1X rate of florpyrauxifen-benzyl (30 g ai ha−1) or dicamba (560 g ae ha−1) at R1, R2, R3, R4, or R5 growth stage. Soybean plant height and yield was reduced from 1/20X dicamba across all reproductive stages. High drift rates (1/20X) of florpyrauxifen-benzyl also reduced soybean plant height >25% and yield across R1 to R4 stages. Germination, stand, plant height, and yield of the offspring of soybean plants treated with dicamba and florpyrauxifen-benzyl were significantly affected. Dicamba applied at a rate of 1/20X at R4 and R5 resulted in 20% and 35% yield reduction for the offspring, respectively. A similar reduction occurred from florpyrauxifen-benzyl applied at R4 and R5 at the 1/20X rate, resulting in 15% to 24% yield reduction for the offspring, respectively. Based on these findings, it is suggested that growers use caution when applying these herbicides in the vicinity of reproductive soybean.


2009 ◽  
Vol 145-146 ◽  
pp. 177-180 ◽  
Author(s):  
Roger Loo ◽  
Andriy Hikavyy ◽  
Frederik E. Leys ◽  
Masayuki Wada ◽  
Kenichi Sano ◽  
...  

Several device concepts have been further evaluated after the successful implementation of epitaxial Si, SiGe and/or Si:C layers. Most of the next device generations will put limitations on the thermal budget of the deposition processes without making concessions on the epitaxial layer quality. In this work we address the impact of ex-situ wet chemical cleans and in-situ pre-epi bake steps, which are required to obtain oxide free Si surfaces for epitaxial growth. The combination of defect measurements, Secondary Ion Mass Spectroscopy, photoluminescence, lifetime measurements, and electrical diode characterization gives a very complete overview of the performance of low-temperature pre-epi cleaning methods. Contamination at the epi/substrate interface cannot be avoided if the pre-epi bake temperature is too low. This interface contamination is traceable by the photoluminescence and lifetime measurements. It may affect device characteristics by enhanced leakage currents and eventually by yield issues due to SiGe layer relaxation or other defect generation. A comparison of state of the art 200 mm and 300 mm process equipment indicates that for the same thermal budgets the lowest contamination levels are obtained for the 300 mm equipments.


Author(s):  
Markus Friedrich ◽  
Matthias Schmaus ◽  
Jonas Sauer ◽  
Tobias Zündorf

This paper investigates existing departure time models for a schedule-based transit assignment and their parametrization. It analyzes the impact of the temporal resolution of travel demand and suggests functions for evaluating the adaptation time as part of the utility of a path. The adaptation time quantifies the time between the preferred and the scheduled departure times. The findings of the analysis suggested that travel demand should be discretized into intervals of 1 min, with interval borders right between the full minute, that is, ±0.5 min. It was shown that longer time intervals led to arbitrary run volumes, even for origin–destination pairs with just one transit line and a fixed headway. Although a linear relationship between adaptation time and adaptation disutility is a common assumption in several publications, it cannot represent certain types of passenger behavior. For some trip purposes, passengers may be insensitive to small adaptation times, but highly sensitive to large adaptations. This requires a nonlinear evaluation function.


PeerJ ◽  
2018 ◽  
Vol 6 ◽  
pp. e5136 ◽  
Author(s):  
Matheus Marcon ◽  
Ricieri Mocelin ◽  
Adrieli Sachett ◽  
Anna M. Siebel ◽  
Ana P. Herrmann ◽  
...  

Background The enriched environment (EE) is a laboratory housing model that emerged from efforts to minimize the impact of environmental conditions on laboratory animals. Recently, we showed that EE promoted positive effects on behavior and cortisol levels in zebrafish submitted to the unpredictable chronic stress (UCS) protocol. Here, we expanded the characterization of the effects of UCS protocol by assessing parameters of oxidative status in the zebrafish brain and reveal that EE protects against the oxidative stress induced by chronic stress. Methods Zebrafish were exposed to EE (21 or 28 days) or standard housing conditions and subjected to the UCS protocol for seven days. Oxidative stress parameters (lipid peroxidation (TBARS), reactive oxygen species (ROS) levels, non-protein thiol (NPSH) and total thiol (SH) levels, superoxide dismutase (SOD) and catalase (CAT) activities were measured in brain homogenate. Results Our results revealed that UCS increased lipid peroxidation and ROS levels, while decreased NPSH levels and SOD activity, suggesting oxidative damage. EE for 28 days prevented all changes induced by the UCS protocol, and EE for 21 days prevented the alterations on NPSH levels, lipid peroxidation and ROS levels. Both EE for 21 or 28 days increased CAT activity. Discussion Our findings reinforce the idea that EE exerts neuromodulatory effects in the zebrafish brain. EE promoted positive effects as it helped maintain the redox homeostasis, which may reduce the susceptibility to stress and its oxidative impact.


Author(s):  
Michael Ghosh ◽  
Hanna Hartmann ◽  
Meike Jakobi ◽  
Léo März ◽  
Leon Bichmann ◽  
...  

Biomaterials play an increasing role in clinical applications and regenerative medicine. A perfectly designed biomaterial should restore the function of damaged tissue without triggering an undesirable immune response, initiate self-regeneration of the surrounding tissue and gradually degrade after implantation. The immune system is well recognized to play a major role in influencing the biocompatibility of implanted medical devices. To obtain a better understanding of the effects of biomaterials on the immune response, we have developed a highly sensitive novel test system capable of examining changes in the immune system by biomaterial. Here, we evaluated for the first time the immunopeptidome, a highly sensitive system that reflects cancer transformation, virus or drug influences and passes these cellular changes directly to T cells, as a test system to examine the effects of contact with materials. Since monocytes are one of the first immune cells reacting to biomaterials, we have tested the influence of different materials on the immunopeptidome of the monocytic THP-1 cell line. The tested materials included stainless steel, aluminum, zinc, high-density polyethylene, polyurethane films containing zinc diethyldithiocarbamate, copper, and zinc sulfate. The incubation with all material types resulted in significantly modulated peptides in the immunopeptidome, which were material-associated. The magnitude of induced changes in the immunopeptidome after the stimulation appeared comparable to that of bacterial lipopolysaccharides (LPS). The source proteins of many detected peptides are associated with cytotoxicity, fibrosis, autoimmunity, inflammation, and cellular stress. Considering all tested materials, it was found that the LPS-induced cytotoxicity-, inflammation- and cellular stress-associated HLA class I peptides were mainly induced by aluminum, whereas HLA class II peptides were mainly induced by stainless steel. These findings provide the first insights into the effects of biomaterials on the immunopeptidome. A more thorough understanding of these effects may enable the design of more biocompatible implant materials using in vitro models in future. Such efforts will provide a deeper understanding of possible immune responses induced by biomaterials such as fibrosis, inflammation, cytotoxicity, and autoimmune reactions.


2020 ◽  
Vol 11 (2) ◽  
pp. 344-348
Author(s):  
O. O. Boyko ◽  
V. V. Brygadyrenko

The article describes a laboratory study of nematocidal properties of flavourings with antibacterial effect against Ascaris suum (Goeze, 1782) and Trichuris suis Schrank, 1788. In the experiments, eight concentrations of food additives with antibacterial properties were used: cinnamaldehyde, benzoic acid, formic acid, linalool, citral, β-ionone. Minimum LC50 value for eggs of A. suum was observed while using cinnamaldehyde and benzoic acid – 1.62 ± 0.37% and 1.69 ± 0.14%, and for eggs of T. suis – 0.57 ± 0.03% and 1.80 ± 0.11% respectively. The lowest influence on the development of eggs of nematodes of pigs’ A. suum and T. suis was exerted by formic acid, linalool, citral and β-ionone. In eggs of A. suum and T. suis, larvae formed in 21 and 50 days even during exposure to 3% emulsions of these substances. The strongest negative impact on the eggs of parasitic nematodes was displayed by cinnamaldehyde flavouring. Further study on nematocidal properties of flavourings, as well as their mixtures, would contribute to the development of preparations which would have a strong effect on eggs and larvae of nematodes of animals and humans.


2020 ◽  
Vol 47 (3) ◽  
pp. 298-308
Author(s):  
K. R. Idowu ◽  
A. S. Chaudhry ◽  
J. Dolfing ◽  
V. O. A. Ojo

Fungal improvement of the nutritive content of low-quality forages can be affected by several factors among which loss of water-soluble content (WSC) plays a major role. To achieve this aim, two growth conditions i.e. forage-liquid ratios (1:3 and 1:5) and two inoculation times (14 and 28 days) were used to cultivate the selected fungi i.e. Pleurotus ostreatus (PO) at 30°C and Ceriporiopsis rivulosus (CR) at 20°C on Brachiaria decumbens (BD), Andropogon gayanus (AG), Triticum aestivum (TA) straw, Lolium perenne (LP), respectively with the view of selecting the optimal conditions that facilitate the release of WSC. The impact that losses of WSC have on the ability of fungi to improve the nutritive content (i.e. proximate, fibre, secondary metabolites and total antioxidant content) of the forages were then measured using 2 filtering methods i.e. light pump filtering method (LFM) and free flow filtering method (FFM). The optimal conditions that supported increased th soluble was identified as 28th day for both fungi; forage-liquid ratio of 1:5 for both fungi in most of the forages except BD (CR) and BD & AG (PO). The LFM led to lesser or no improvement in the nutritive quality of the upgraded forages while the opposite was recorded with the LFM. The LFM as against the FFM produced upgraded forages with lesser reduction in NDF; similar or higher ADF and lignin contents; and similar reduction in secondary metabolites and TAC when compared with un-improved forages. It can be concluded that the fungal improvement of the nutritive content of low-quality forages was negatively affected by the loss of WSC. It is therefore recommended that fungal improvement of the nutritive quality of low quality forages should be carried out with methods or techniques that facilitates little or no WSC loss in the upgraded forages.


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