scholarly journals Transcriptome analysis reveals the main metabolic pathway of c-GMP induced by salt stress in tomato seedlings

2020 ◽  
Author(s):  
Xiaolin Zhu ◽  
Meifei Su ◽  
Xiaohong Wei ◽  
Yu Long ◽  
Baoqiang Wang ◽  
...  
Keyword(s):  
Salt Stress ◽  
Growth And Development ◽  
Molecular Mechanisms ◽  
Lignin Content ◽  
Soluble Sugar ◽  
Guanosine Monophosphate ◽  
High Yield ◽  
Salt Adaptation ◽  
Tomato Production ◽  
Tomato Seedlings

AbstractTomato is a model crop, as well as important food worldwide. In the arid areas, aggravation of soil salinity has become the primary problem that threatens the high yield in tomato production. As a second messenger substance, cyclic guanosine monophosphate (c-GMP) plays an indispensable role in plant response to salt stress through regulating cell processes to promote plant growth and development. However, this mechanism has not been fully explored in tomato seedlings. In this experiment, the tomato seeds were cultured in distilled water (CK), 20 μM c-GMP (T1), 50 mM NaCl (T2), 20 μM c-GMP + 50 mM NaCl (T3). The results show that 20 μM c-GMP effectively alleviated the inhibition of 50 mM NaCl on tomato growth and development, inducing the expression of 1580 DEGs. 95 DEGs were up-regulated and 442 DEGs were down-regulated (CK vs T1), whereas in the T2 vs T3 comparison 271 DEGs were up-regulated and 772 DEGs were down-regulated. Based on KEGG analysis, the majority of DEGs were involved in metabolism; exogenous c-GMP induced significant enrichment of pathways associated with carbohydrates, phenylpropanoids and fatty acid metabolism. Most PMEs, acCoA, PAL, PODs, FADs, and AD were up-regulated, and GAPDHs, PL, PG, BXL4, and β-G were down-regulated, which reduced susceptibility of tomato seedlings to salt and promoted their salt adaptation. The application of c-GMP promoted soluble sugar, flavonoids and lignin content, reduced accumulation of MDA, and enhanced the activity of POD. Thus, our results provide insights into the molecular mechanisms associated with salt tolerance of tomato seedlings.

scholarly journals Characteristics of Azotobacter sp. strain AC11 and their effects on the growth of tomato seedlings under salt stress

2019 ◽  
pp. 520
Author(s):  
Honglian Ge
Keyword(s):  
Salt Stress ◽  
Sugar Content ◽  
Soluble Sugar ◽  
Salt Resistance ◽  
Shoot Height ◽  
Tomato Seedlings ◽  
Pot Trials ◽  
Mda Content ◽  
Phosphorus And Potassium ◽  
Indole 3 Acetic Acid

This study was aimed to investigate the potential of Azotobacter sp. strain AC11 in promoting growth and enhancing resistance to salinity stress in tomato seedlings. In this study, we measured the ability of strain AC11 to fix nitrogen and solubilize phosphorus and potassium, as well as its production of indole-3-acetic acid (IAA) and siderophores. A greenhouse pot experiment was conducted to investigate whether strain AC11 promoted tomato seedlings’ growth and enhanced their salt resistance. The results showed that strain AC11 produced IAA and siderophores, fixed nitrogen, and solubilized potassium and phosphorus. In pot trials, strain AC11 increased the shoot height, root length, and dry and fresh weights of tomato seedlings, and also increased their chlorophyll, soluble protein, and soluble sugar content. Furthermore, the bacteria induced the activities of superoxide dismutase (SOD; EC: 1.15.1.1), peroxidase (POD; EC: 1.11.1.7), and catalase (CAT; EC: 1.11.1.6), while it reduced the malondialdehyde (MDA) content and rate of O2- generation in tomato seedlings under salt stress. In summary, Azotobacter sp. strain AC11 promoted the growth of tomato seedlings and induced resistance to salt stress by producing IAA and siderophores, promoting the activities of antioxidant enzymes, and increasing the content of osmotic adjustment substances as well as enhancing the availability of the macronutrients N, P, K, and Fe3+ in the soil.

scholarly journals De novo Comparative Transcriptome Analysis of Genes Differentially Expressed in the Scion of Homografted and Heterografted Tomato Seedlings

2019 ◽  
Vol 9 (1) ◽  
Author(s):  
Hui Wang ◽  
Peng Zhou ◽  
Wenying Zhu ◽  
Fu Wang
Keyword(s):  
Differentially Expressed Genes ◽  
Molecular Mechanisms ◽  
De Novo ◽  
Healing Process ◽  
Differentially Expressed ◽  
Mitogen Activated Protein Kinase ◽  
Graft Union ◽  
Tomato Production ◽  
Tomato Seedlings ◽  
Hormone Signalling

AbstractTomato is an important vegetable crop grown worldwide. Grafting is an agricultural technique that is used to improve growth, yield, and resistance to diverse stresses in tomato production. Here, we examined the differences between the scion of heterografted (‘Provence’/‘Haomei’) and homografted (‘Provence’/‘Provence’) tomato seedlings. We observed anatomical changes during the graft-union healing process in heterografted and homografted tomato seedlings and conducted transcriptome analyses of the ‘Provence’ scion from both graft combinations. With the development of calli from both graft partners, the isolation layer became thinner at 16 d after grafting (DAG). Compared with that of homografts, the healing in heterografts was slightly delayed, but the graft union had completely healed at 21 DAG. In total, 858 significantly differentially expressed genes were detected between the transcriptomes of heterografts and homografts at 16 DAG. Functional pathways identified by GO and KEGG enrichment analyses were associated with primary and secondary metabolism, hormone signalling, transcription factor regulation, transport, and responses to stimuli. Many differentially expressed genes were involved in pathways associated with mitogen-activated protein kinase signalling, plant hormone signalling, and oxidative stress. A number of transcription factors were up-regulated in the scion of heterografted seedlings. The results provide a valuable resource for the elucidation of the molecular mechanisms, and candidate genes for functional analyses, of heterograft and homograft systems.

scholarly journals Cellular Localization of Exogenous Cry1Ab/c and its Interaction with Plasma Membrane Ca2+-ATPase in Transgenic Rice

2021 ◽  
Vol 9 ◽  
Author(s):  
Jianmei Fu ◽  
Yu Shi ◽  
Laipan Liu ◽  
Biao Liu
Keyword(s):  
Plasma Membrane ◽  
Salt Stress ◽  
Membrane Protein ◽  
Atpase Activity ◽  
Transgenic Rice ◽  
Growth And Development ◽  
Cellular Localization ◽  
Molecular Mechanisms ◽  
Plasma Membrane Protein ◽  
C Protein

The cellular localization of exogenous proteins expressed in transgenic crops not only determines their stability, but also their effects on crop growth and development, including under stressful conditions; however, the underlying molecular mechanisms remain unknown. Here, we determined the cellular distribution of exogenously expressed Cry1Ab/c protein in insect-resistant transgenic rice Huahui-1 (HH1) cells through subcellular localization, immunohistochemistry, immunofluorescence, and western blot analyses. Interaction between the Cry1Ab/c protein and the preliminarily screened endogenous plasma membrane protein Ca2+-ATPase was investigated through yeast two-hybrid, bimolecular fluorescence complementation (BIFC), and co-immunoprecipitation analyses. The potential interaction mechanism was analyzed by comparing the cellular localization and interaction sites between Cry1Ab/c and Ca2+-ATPase. Phenotypic indices and Ca2+-ATPase activity, which may be regulated by the Cry1Ab/c–Ca2+-ATPase interaction, were determined in transgenic HH1 and the parental line Minghui-63 under stress-free and salt-stress conditions. The results showed that Cry1Ab/c was not only distributed in the cytoplasm and nucleus but was also distributed on the plasma membrane, where it interacted with plasma membrane Ca2+-ATPase. This interaction partially retain plasma membrane protein Ca2+-ATPase in the nucleus by a BIFC experiment and thus may affect Ca2+-ATPase activity on the membrane by altering the cellular location of the protein. Consistently, our results confirmed that the presence of Cry1Ab/c in the transgenic HH1 resulted in a reduction in Ca2+-ATPase activity as well as causing detrimental effects on plant phenotype, including significantly reduced plant height and biomass, compared to parental MH63; and that these detrimental effects were more pronounced under salt stress conditions, impacting the salt resistance of the transgenic plants. We suggest that the Cry1Ab/c–Ca2+-ATPase interaction may explain the plasma membrane localization of Cry1Ab/c, which lacks a signal peptide and a transmembrane domain, and the adverse effects of Cry1Ab/c expression on the growth and development of transgenic HH1 plants under salt stress. This information may clarify the molecular mechanisms of these unintended effects and demonstrate the feasibility of evaluating the success and performance of genetic modification of commercially vital crops.

scholarly journals Exogenous Application of Abscisic Acid, Putrescine, or 2,4-Epibrassinolide at Appropriate Concentrations Effectively Alleviate Damage to Tomato Seedlings from Suboptimal Temperature Stress

2012 ◽  
Vol 22 (1) ◽  
pp. 137-144 ◽  
Author(s):  
Weijie Jiang ◽  
Jie Bai ◽  
Xueyong Yang ◽  
Hongjun Yu ◽  
Yanpeng Liu
Keyword(s):  
Abscisic Acid ◽  
Temperature Stress ◽  
Soluble Sugar ◽  
Protective Effects ◽  
Triphenyltetrazolium Chloride ◽  
Tomato Production ◽  
Suboptimal Temperature ◽  
Exogenous Application ◽  
Tomato Seedlings ◽  
Tomato Cultivars

The application of plant growth regulators (PGRs), such as abscisic acid (ABA), putrescine (Put), and 2,4-epibrassinolide (EBR), has been shown to enhance a plant's resistance to various abiotic stresses. However, the protective effects of these PGRs on tomato (Solanum lycopersicum) seedlings under suboptimal temperature stress have not yet been evaluated. We also do not know the most effective method of application of PGRs for various tomato cultivars. We studied the effects of three rates of exogenous ABA, Put, or EBR in limiting damage from suboptimal temperature stress on two tomato cultivars, Zhongshu6 (considered sensitive to suboptimal temperatures) and SANTIAM (considered tolerant to suboptimal temperatures). Results showed that application of these PGRs at appropriate concentrations could effectively reduce the decline in the net photosynthetic rate (Pn) and the chlorophyll (Chl) content in leaves caused by suboptimal temperature stress in both ‘Zhongshu6’ and ‘SANTIAM’ and could promote an increase in organic osmolyte (proline and soluble sugar) contents and root 2,3,5-triphenyltetrazolium chloride (TTC)-reducing activity for ‘Zhongshu6’. However, these effects were inferior on ‘SANTIAM’. For both cultivars, the best treatment concentrations are 1 mm ABA, 0.1 mm Put, or 0.02 μM EBR. Results indicate that in tomato production, exogenous application of ABA, Put, or EBR at appropriate concentrations can effectively limit damage from suboptimal temperature stress.

scholarly journals Pruning length of lateral branches influences auxin and cytokinins homeostasis in relation to growth and yields in Solanum lycopersicum L.

2019 ◽  
Author(s):  
Yang Xu ◽  
Xuelian Liu ◽  
Chaoheng Gu ◽  
Yanyan Yan ◽  
Kai Li ◽  
...  
Keyword(s):  
Plant Growth ◽  
Growth Regulation ◽  
Molecular Mechanisms ◽  
Optimal Growth ◽  
High Yield ◽  
Labor Costs ◽  
Tomato Cultivar ◽  
Tomato Production ◽  
Tomato Plants ◽  
Lateral Branches

Abstract Lateral branches (LBs) pruning is performed frequently to keep the tomato plants in optimal growth conditions. However, the suitable pruning length of LBs, as well as it-mediated physiological and molecular mechanisms on plant growth regulation remains elusive in tomato. The effects of pruning length of LBs from 0 to 20 cm on vegetative growth, reproductive growth, labor costs, hormone metabolism and genes transcripts were evaluated on indeterminate type tomato cultivar. By comprehensive analysis, we provided evidence that pruning length of LBs at about 6 ~ 7 cm was suitable for plant growth, high yield, and low labor costs in tomato production. For mechanisms, appropriate extension of pruning length of LBs increased indole acetic acid (IAA) concentrations in root, which promoted the biosynthesis and upward transport of inactive cytokinins (CKs), as well as root development. Meanwhile, existence of LBs had inhibited effect on auxin outflow of the lower fruit stalks by testing transcripts of AUX1 and PIN , which increased the IAA and CKs concentrations of ovary and then promoted fruit setting and swelling. Additionally, pruning length of LBs also influenced the leaf senescence to control assimilation. Taken together, we highlighted that pruning length of LBs influenced auxin and cytokinins homeostasis in relation to growth and yields in tomato plants.

Recent approaches for isolating and culturing mouse bone marrow-derived mesenchymal stromal stem cells

2020 ◽  
Vol 15 ◽  
Author(s):  
Basem M. Abdallah ◽  
Hany M. Khattab
Keyword(s):  
Stem Cells ◽  
Bone Marrow ◽  
Molecular Mechanisms ◽  
Replicative Senescence ◽  
Cellular Heterogeneity ◽  
High Yield ◽  
Mouse Strains ◽  
Mouse Bone Marrow ◽  
Differentiation Potential ◽  
Stromal Stem Cells

: The isolation and culture of murine bone marrow-derived mesenchymal stromal stem cells (mBMSCs) have attracted great interest in terms of the pre-clinical applications of stem cells in tissue engineering and regenerative medicine. In addition, culturing mBMSCs is important for studying the molecular mechanisms of bone remodelling using relevant transgenic mice. Several factors have created challenges in the isolation and high-yield expansion of homogenous mBMSCs; these factors include low frequencies of bone marrow-derived mesenchymal stromal stem cells (BMSCs) in bone marrow, variation among inbred mouse strains, contamination with haematopoietic progenitor cells (HPCs), the replicative senescence phenotype and cellular heterogeneity. In this review, we provide an overview of nearly all protocols used for isolating and culturing mBMSCs with the aim of clarifying the most important guidelines for culturing highly purified mBMSC populations retaining in vitro and in vivo differentiation potential.

scholarly journals Characterization of Plant Growth-Promoting Traits and Inoculation Effects on Triticum durum of Actinomycetes Isolates under Salt Stress Conditions

Soil Systems ◽  
2021 ◽  
Vol 5 (2) ◽  
pp. 26
Author(s):  
Rihab Djebaili ◽  
Marika Pellegrini ◽  
Massimiliano Rossi ◽  
Cinzia Forni ◽  
Maria Smati ◽  
...  
Keyword(s):  
Acetic Acid ◽  
Salt Stress ◽  
Plant Growth ◽  
Durum Wheat ◽  
Growth And Development ◽  
Indole Acetic Acid ◽  
Greenhouse Experiment ◽  
Hydrocyanic Acid ◽  
In Vitro Assays

This study aimed to characterize the halotolerant capability, in vitro, of selected actinomycetes strains and to evaluate their competence in promoting halo stress tolerance in durum wheat in a greenhouse experiment. Fourteen isolates were tested for phosphate solubilization, indole acetic acid, hydrocyanic acid, and ammonia production under different salt concentrations (i.e., 0, 0.25, 0.5, 0.75, 1, 1.25, and 1.5 M NaCl). The presence of 1-aminocyclopropane-1-carboxylate deaminase activity was also investigated. Salinity tolerance was evaluated in durum wheat through plant growth and development parameters: shoot and root length, dry and ash-free dry weight, and the total chlorophyll content, as well as proline accumulation. In vitro assays have shown that the strains can solubilize inorganic phosphate and produce indole acetic acid, hydrocyanic acid, and ammonia under different salt concentrations. Most of the strains (86%) had 1-aminocyclopropane-1-carboxylate deaminase activity, with significant amounts of α-ketobutyric acid. In the greenhouse experiment, inoculation with actinomycetes strains improved the morpho-biochemical parameters of durum wheat plants, which also recorded significantly higher content of chlorophylls and proline than those uninoculated, both under normal and stressed conditions. Our results suggest that inoculation of halotolerant actinomycetes can mitigate the negative effects of salt stress and allow normal growth and development of durum wheat plants.

scholarly journals Engineered BcZAT12 gene mitigates salt stress in tomato seedlings

2021 ◽  
Vol 27 (3) ◽  
pp. 535-541
Author(s):  
Avinash Chandra Rai ◽  
Ashutosh Rai ◽  
Kavita Shah ◽  
Major Singh
Keyword(s):  
Salt Stress ◽  
Tomato Seedlings

scholarly journals Transcriptomic Analysis of Short-Term Salt-Stress Response in Mega Hybrid Rice Seedlings

Agronomy ◽  
2021 ◽  
Vol 11 (7) ◽  
pp. 1328
Author(s):  
Noushin Jahan ◽  
Yang Lv ◽  
Mengqiu Song ◽  
Yu Zhang ◽  
Liangguang Shang ◽  
...  
Keyword(s):  
Salt Stress ◽  
Molecular Mechanisms ◽  
Oryza Sativa L ◽  
Transcriptome Profiling ◽  
Bhlh Transcription Factor ◽  
F1 Hybrid ◽  
Salt Stress Response ◽  
Productivity Losses ◽  
Expression Of Genes ◽  
Trait Locus

Salinity is a major abiotic stressor that leads to productivity losses in rice (Oryza sativa L.). In this study, transcriptome profiling and heterosis-related genes were analyzed by ribonucleic acid sequencing (RNA-Seq) in seedlings of a mega rice hybrid, Liang-You-Pei-Jiu (LYP9), and its two parents 93–11 and Pei-ai64s (PA64s), under control and two different salinity levels, where we found 8292, 8037, and 631 salt-induced differentially expressed genes (DEGs), respectively. Heterosis-related DEGs were obtained higher after 14 days of salt treatment than after 7 days. There were 631 and 4237 salt-induced DEGs related to heterosis under 7-day and 14-day salt stresses, respectively. Gene functional classification showed the expression of genes involved in photosynthesis activity after 7-day stress treatment, and in metabolic and catabolic activity after 14 days. In addition, we correlated the concurrence of an expression of DEGs for the bHLH transcription factor and a shoot length/salinity-related quantitative trait locus qSL7 that we fine-mapped previously, providing a confirmed case of heterosis-related genes. This experiment reveals the transcriptomic divergence of the rice F1 hybrid and its parental lines under control and salt stress state, and enlightens about the significant molecular mechanisms developed over time in response to salt stress.

scholarly journals Bemisia tabaci Vesicle-Associated Membrane Protein 2 Interacts with Begomoviruses and Plays a Role in Virus Acquisition

Cells ◽  
2021 ◽  
Vol 10 (7) ◽  
pp. 1700
Author(s):  
Yun-Yun Fan ◽  
Yu-Wei Zhong ◽  
Jing Zhao ◽  
Yao Chi ◽  
Sophie Bouvaine ◽  
...  
Keyword(s):  
Membrane Protein ◽  
Bemisia Tabaci ◽  
Species Complex ◽  
Molecular Mechanisms ◽  
Whole Body ◽  
Sri Lankan ◽  
Tomato Production ◽  
Virus Acquisition ◽  
Leaf Curl Virus ◽  
Whitefly Vector

Begomoviruses cause substantial losses to agricultural production, especially in tropical and subtropical regions, and are exclusively transmitted by members of the whitefly Bemisia tabaci species complex. However, the molecular mechanisms underlying the transmission of begomoviruses by their whitefly vector are not clear. In this study, we found that B. tabaci vesicle-associated membrane protein 2 (BtVAMP2) interacts with the coat protein (CP) of tomato yellow leaf curl virus (TYLCV), an emergent begomovirus that seriously impacts tomato production globally. After infection with TYLCV, the transcription of BtVAMP2 was increased. When the BtVAMP2 protein was blocked by feeding with a specific BtVAMP2 antibody, the quantity of TYLCV in B. tabaci whole body was significantly reduced. BtVAMP2 was found to be conserved among the B. tabaci species complex and also interacts with the CP of Sri Lankan cassava mosaic virus (SLCMV). When feeding with BtVAMP2 antibody, the acquisition quantity of SLCMV in whitefly whole body was also decreased significantly. Overall, our results demonstrate that BtVAMP2 interacts with the CP of begomoviruses and promotes their acquisition by whitefly.

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