scholarly journals Is the sky the limit? On the expansion threshold of a species’ range

2017 ◽  
Author(s):  
Jitka Polechová

AbstractMore than a hundred years after Grigg’s influential analysis of species’ borders, the causes of limits to species’ ranges still represent a puzzle that has never been understood with clarity. The topic has become especially important recently as many scientists have become interested in the potential for species’ ranges to shift in response to climate change – and yet, nearly all of those studies fail to recognise or incorporate evolutionary genetics in a way that relates to theoretical developments. I show that range margins can be understood based on just two measurable parameters: i) the fitness cost of dispersal – a measure of environmental heterogeneity – and ii) the strength of genetic drift, which reduces genetic diversity. Together, these two parameters define an expansion threshold: adaptation fails when genetic drift reduces genetic diversity below that required for adaptation to environmental heterogeneity. When the key parameters drop below this expansion threshold locally, a sharp range margin forms. When they drop below this threshold throughout the species’ range, adaptation collapses everywhere, resulting in either extinction, or formation of a fragmented meta-population. Because the effects of dispersal differ fundamentally with dimension, the second parameter – the strength of genetic drift – is qualitatively different compared to a linear habitat. In two-dimensional habitats, genetic drift becomes effectively independent of selection. It decreases with neighbourhood size – the number of individuals accessible by dispersal within one generation. Moreover, in contrast to earlier predictions, which neglected evolution of genetic variance and/or stochasticity in two dimensions, dispersal into small marginal populations aids adaptation. This is because the reduction of both genetic and demographic stochasticity has a stronger effect than the cost of dispersal through increased maladaptation. The expansion threshold thus provides a novel, theoretically justified and testable prediction for formation of the range margin and collapse of the species’ range.Author summaryGene flow across environments has conflicting effects: while it increases the genetic variation necessary for adaptation and counters the loss of genetic diversity due to genetic drift, it may also swamp adaptation to local conditions. This interplay is crucial for the dynamics of a species’ range expansion, which can thus be understood based on two dimensionless parameters: i) the fitness cost of dispersal – a measure of environmental heterogeneity – and ii) the strength of genetic drift – a measure of reduction of genetic diversity. Together, these two parameters define an expansion threshold: adaptation fails when the number of individuals accessible by dispersal within one generation is so small that genetic drift reduces genetic diversity below the level required for adaptation to environmental heterogeneity. This threshold provides a novel, theoretically justified and testable prediction for formation of a range margin and a collapse of a species’ range in two-dimensional habitats.

Author(s):  
Richard Frankham ◽  
Jonathan D. Ballou ◽  
Katherine Ralls ◽  
Mark D. B. Eldridge ◽  
Michele R. Dudash ◽  
...  

Genetic management of fragmented populations involves the application of evolutionary genetic theory and knowledge to alleviate problems due to inbreeding and loss of genetic diversity in small population fragments. Populations evolve through the effects of mutation, natural selection, chance (genetic drift) and gene flow (migration). Large outbreeding, sexually reproducing populations typically contain substantial genetic diversity, while small populations typically contain reduced levels. Genetic impacts of small population size on inbreeding, loss of genetic diversity and population differentiation are determined by the genetically effective population size, which is usually much smaller than the number of individuals.


2021 ◽  
Vol 11 (1) ◽  
Author(s):  
Sunčica Stipoljev ◽  
Toni Safner ◽  
Pavao Gančević ◽  
Ana Galov ◽  
Tina Stuhne ◽  
...  

AbstractThe aoudad (Ammotragus lervia Pallas 1777) is an ungulate species, native to the mountain ranges of North Africa. In the second half of the twentieth century, it was successfully introduced in some European countries, mainly for hunting purposes, i.e. in Croatia, the Czech Republic, Italy, and Spain. We used neutral genetic markers, the mitochondrial DNA control region sequence and microsatellite loci, to characterize and compare genetic diversity and spatial pattern of genetic structure on different timeframes among all European aoudad populations. Four distinct control region haplotypes found in European aoudad populations indicate that the aoudad has been introduced in Europe from multiple genetic sources, with the population in the Sierra Espuña as the only population in which more than one haplotype was detected. The number of detected microsatellite alleles within all populations (< 3.61) and mean proportion of shared alleles within all analysed populations (< 0.55) indicates relatively low genetic variability, as expected for new populations funded by a small number of individuals. In STRUCTURE results with K = 2–4, Croatian and Czech populations cluster in the same genetic cluster, indicating joined origin. Among three populations from Spain, Almeria population shows as genetically distinct from others in results, while other Spanish populations diverge at K = 4. Maintenance of genetic diversity should be included in the management of populations to sustain their viability, specially for small Czech population with high proportion of shared alleles (0.85) and Croatian population that had the smallest estimated effective population size (Ne = 5.4).


2015 ◽  
Vol 5 (5) ◽  
pp. 449-459
Author(s):  
E. A. Petrova ◽  
S. N. Velisevich ◽  
M. M. Belokon ◽  
Yu. S. Belokon ◽  
D. V. Politov ◽  
...  

2021 ◽  
Vol 43 (1) ◽  
pp. 38-42
Author(s):  
Kavungal Priya ◽  
◽  
Indira . ◽  
Vadakkethil Balakrishnan Sreekumar ◽  
Renuka . ◽  
...  

Calamus brandisii Becc. is one of the endemic slender rattans found in the Western Ghats of India. The genetic diversity of two main populations available in Kerala was investigated using 20 RAPD and 9 ISSR markers. Two parameters viz., gene diversity and genetic diversity within and among populations were analyzed. ISSR analysis showed quite high genetic diversity in Pandimotta compared to Bonacaud population whereas in RAPD markers both these populations were moderately diverse. The percentage of total genetic differentiation (Gst) among two populations is relatively higher than the mean Gst value indicating high genetic diversity within the populations. The genetic distance between these two populations was 0.1739 with ISSR markers and 0.1971 with RAPD markers. Because of its high genetic diversity, Pandimotta population can be treated as an important population of gene diversity with potentially useful genes. This may be included in the high priority reservoir for genetic conservation also.


Author(s):  
Binia De Cahsan ◽  
Katrin Kiemel ◽  
Michael Westbury ◽  
Maike Lauritsen ◽  
Marijke Autenrieth ◽  
...  

Northern range margin populations of the European fire-bellied toad (Bombina bombina) have rapidly declined during recent decades. Extensive agricultural land use has fragmented the landscape, leading to habitat disruption and loss, as well as eutrophication of ponds. In Northern Germany (Schleswig-Holstein) and Southern Sweden, this decline resulted in decreased gene flow from surrounding populations, low genetic diversity, and a putative reduction in adaptive potential, leaving populations vulnerable to future environmental and climatic changes. Previous studies using mitochondrial control region and nuclear transcriptome-wide SNP data detected introgressive hybridization in multiple northern B. bombina populations after presumed illegal release of toads from Austria. Here, we determine the impact of this introgression by comparing the body conditions (as a proxy for fitness) of introgressed and non-introgressed populations, and the genetic consequences in two candidate genes for putative local adaptation (the MHC II gene as part of the adaptive immune system and the stress response gene HSP70 kDa). We detected regional differences in body condition. We observed significantly elevated levels of within individual MHC allele counts in introgressed Swedish populations, associated with a tendency towards higher body weight, relative to regional non-introgressed populations. These differences were not observed among introgressed and non-introgressed German populations. Genetic diversity in both MHC and HSP was generally lower in northern than southern populations. Our study sheds light on the potential benefits of translocations of more distantly related conspecifics as a means to increase adaptive genetic variability and fitness of struggling range margin populations without distortion of local adaptation.


2021 ◽  
Author(s):  
Jiyeong Shin ◽  
Jongwoo Jung

Abstract Background: Mosquitoes of the genus Aedes are important invasive species contributing to the spread of chikungunya, dengue fever, yellow fever, Zika virus, and other dangerous vector-borne diseases. Aedes albopictus is native to southeast Asia with rapid expansion due to human activity, showing a wide distribution in the Korean peninsula. Aedes flavopictus is considered to be native to East Asia with a broad distribution in the region, including in the Korean peninsula. Gaining a better understanding of the genetic diversity of these species is critical for establishing strategies for disease prevention and vector control. Methods: We obtained DNA from 148 specimens of Ae. albopictus and 166 specimens of Ae. flavopictus in Korea, and amplified two mitochondrial genes (COI and ND5) to compare the genetic diversity and structure of the two species.Results: We obtained a 658-bp sequence of COI and a 423-bp sequence of ND5 from the two mosquito species. We found low diversity and an insignificant population genetic structure in Ae. albopictus, and high diversity and an insignificant structure in Ae. flavopictus for these two mitochondrial genes. Ae. albopictus had less haplotypes with respect to the number of individuals, and a slight mismatch distribution was confirmed. By contrast, Ae. flavopictus had a large number of haplotypes compared with the number of individuals, and a large unimodal-type mismatch distribution was confirmed. Although the genetic structure of both species was insignificant, Ae. flavopictus exhibited higher genetic diversity than Ae. albopictus.Conclusions: Ae. albopictus appears to be an introduced species, whereas Ae. flavopictus is an endemic species to the Korean peninsula, and the difference in genetic diversity between the two species is related to their adaptability and introduction history. As an endemic species, Ae. flavopictus is likely to have a larger population size than expected. Further studies on the genetic structure and diversity of these two mosquito species will provide useful data for vector control.


PLoS ONE ◽  
2021 ◽  
Vol 16 (3) ◽  
pp. e0247586
Author(s):  
Christine E. Edwards ◽  
Brooke C. Tessier ◽  
Joel F. Swift ◽  
Burgund Bassüner ◽  
Alexander G. Linan ◽  
...  

Understanding genetic diversity and structure in a rare species is critical for prioritizing both in situ and ex situ conservation efforts. One such rare species is Physaria filiformis (Brassicaceae), a threatened, winter annual plant species. The species has a naturally fragmented distribution, occupying three different soil types spread across four disjunct geographical locations in Missouri and Arkansas. The goals of this study were to understand: (1) whether factors associated with fragmentation and small population size (i.e., inbreeding, genetic drift or genetic bottlenecks) have reduced levels of genetic diversity, (2) how genetic variation is structured and which factors have influenced genetic structure, and (3) how much extant genetic variation of P. filiformis is currently publicly protected and the implications for the development of conservation strategies to protect its genetic diversity. Using 16 microsatellite markers, we genotyped individuals from 20 populations of P. filiformis from across its geographical range and one population of Physaria gracilis for comparison and analyzed genetic diversity and structure. Populations of P. filiformis showed comparable levels of genetic diversity to its congener, except a single population in northwest Arkansas showed evidence of a genetic bottleneck and two populations in the Ouachita Mountains of Arkansas showed lower genetic variation, consistent with genetic drift. Populations showed isolation by distance, indicating that migration is geographically limited, and analyses of genetic structure grouped individuals into seven geographically structured genetic clusters, with geographic location/spatial separation showing a strong influence on genetic structure. At least one population is protected for all genetic clusters except one in north-central Arkansas, which should therefore be prioritized for protection. Populations in the Ouachita Mountains were genetically divergent from the rest of P. filiformis; future morphological analyses are needed to identify whether it merits recognition as a new, extremely rare species.


2016 ◽  
Author(s):  
Stephen R. Doyle ◽  
Catherine Bourguinat ◽  
Hugues C. Nana-Djeunga ◽  
Jonas A. Kengne-Ouafo ◽  
Sébastien D.S. Pion ◽  
...  

ABSTRACTBackgroundTreatment of onchocerciasis using mass ivermectin administration has reduced morbidity and transmission throughout Africa and Central/South America. Mass drug administration is likely to exert selection pressure on parasites, and phenotypic and genetic changes in several Onchocerca volvulus populations from Cameroon and Ghana - exposed to more than a decade of regular ivermectin treatment - have raised concern that sub-optimal responses to ivermectin’s anti-fecundity effect are becoming more frequent and may spread.Methodology/Principal FindingsPooled next generation sequencing (Pool-seq) was used to characterise genetic diversity within and between 108 adult female worms differing in ivermectin treatment history and response. Genome-wide analyses revealed genetic variation that significantly differentiated good responder (GR) and sub-optimal responder (SOR) parasites. These variants were not randomly distributed but clustered in ~31 quantitative trait loci (QTLs), with little overlap in putative QTL position and gene content between countries. Published candidate ivermectin SOR genes were largely absent in these regions; QTLs differentiating GR and SOR worms were enriched for genes in molecular pathways associated with neurotransmission, development, and stress responses. Finally, single worm genotyping demonstrated that geographic isolation and genetic change over time (in the presence of drug exposure) had a significantly greater role in shaping genetic diversity than the evolution of SOR.Conclusions/SignificanceThis study is one of the first genome-wide association analyses in a parasitic nematode, and provides insight into the genomics of ivermectin response and population structure of O. volvulus. We argue that ivermectin response is a polygenically-determined quantitative trait in which identical or related molecular pathways but not necessarily individual genes likely determine the extent of ivermectin response in different parasite populations. Furthermore, we propose that genetic drift rather than genetic selection of SOR is the underlying driver of population differentiation, which has significant implications for the emergence and potential spread of SOR within and between these parasite populations.Author summaryOnchocerciasis is a human parasitic disease endemic across large areas of Sub-Saharan Africa, where more that 99% of the estimated 100 million people globally at-risk live. The microfilarial stage of Onchocerca volvulus causes pathologies ranging from mild itching to visual impairment and ultimately, irreversible blindness. Mass administration of ivermectin kills microfilariae and has an anti-fecundity effect on adult worms by temporarily inhibiting the development in utero and/or release into the skin of new microfilariae, thereby reducing morbidity and transmission. Phenotypic and genetic changes in some parasite populations that have undergone multiple ivermectin treatments in Cameroon and Ghana have raised concern that sub-optimal response to ivermectin’s anti-fecundity effect may increase in frequency, reducing the impact of ivermectin-based control measures. We used next generation sequencing of small pools of parasites to define genome-wide genetic differences between phenotypically characterised good and sub-optimal responder parasites from Cameroon and Ghana, and identified multiple genomic regions differentiating the response types. These regions were largely different between parasites from both countries but revealed common molecular pathways that might be involved in determining the extent of response to ivermectin’s anti-fecundity effect. These data reveal a more complex than previously described pattern of genetic diversity among O. volvulus populations that differ in their geography and response to ivermectin treatment.


1979 ◽  
Vol 23 (89) ◽  
pp. 420-421 ◽  
Author(s):  
W. F. Budd ◽  
B. J. McInnes ◽  
I. Smith

Abstract It is difficult to deduce sliding properties from the numerical modelling of ordinary glaciers because the flow law of ice is still not known well enough to clearly differentiate sliding from internal deformation of the ice. For glaciers undergoing high-speed surges it appears that the majority of the total speed is due to sliding. Furthermore the average basal shear stress of the ice mass is lowered during the surge. This suggests that surging glaciers can be modelled by incorporating a sliding friction law which has the effective friction coefficient decreasing for high velocities. A relation of this type has been found for ice sliding on granite at −0.5°C by Barnes and others (1971) and has also been obtained for rough slabs with ice at the pressure-melting point by Budd and others (1979). A simple two-dimensional model was developed by Budd and McInnes (1974) and Budd (1975), which was found to exhibit the typical periodic surge-like characteristics of real ice masses. Since the sliding-stress relation for the low velocities and stresses was not known, and was not so important for the surges, it was decided to use the condition of gross equilibrium (i.e. that the ice mass as a whole does not accelerate) together with a single-parameter relation for the way in which the friction decreases with stress and velocity to prescribe the basal shear-stress distribution. The low-stress-velocity relation can thus be obtained as a result. This two-dimensional model has now been parameterized to take account of the three-dimensional aspects of real ice masses. A number of ice masses have since been closely matched by the model including three well-known surging ice masses: Lednik Medvezhiy, Variegated Glacier, and Bruarjökull. Since the flow properties of ice are so poorly known—especially for longitudinal stress and strain-rates—the model has been run with two unknown parameters: one a flow-law parameter (η) and the other a sliding parameter (ø). The model is run over a wide range of these two parameters to see if a good match can be made to the real ice masses and if so what the values of the parameters η and ø are for best fit. The matching of the three above ice masses gave very similar values for each of the two parameters η and ø, the value of η being within the range of values expected for the flow properties of temperate ice as determined by laboratory experiments. Using the same values of η and ø it is found that the ordinary glaciers modelled so far do not develop surging but that they could do if the value of ø were increased or if the mass-balance input were sufficiently increased. For Lednik Medvezhiy a detailed analysis of the friction coefficient with velocity was carried out and it was found that the values required for best fit showed a very close agreement to the sliding friction curve of Barnes and others (1971) at −0.5°C. It is concluded that this type of sliding relation can account for the major features of glacier surge phenomena. Finally it is apparent that the numerical modelling technique can be used very effectively to test any large-scale bulk sliding relation by the analysis of real surges of ice masses and in addition can provide further insight into the sliding relation in association with other stresses in the ice mass.


2019 ◽  
Vol 29 (08) ◽  
pp. 1950111 ◽  
Author(s):  
Mohammed-Salah Abdelouahab ◽  
René Lozi ◽  
Guanrong Chen

This article investigates the complex phenomena of canard explosion with mixed-mode oscillations, observed from a fractional-order FitzHugh–Nagumo (FFHN) model. To rigorously analyze the dynamics of the FFHN model, a new mathematical notion, referred to as Hopf-like bifurcation (HLB), is introduced. HLB provides a precise definition for the change between a fixed point and an [Formula: see text]-asymptotically [Formula: see text]-periodic solution of the fractional-order dynamical system, as well as the stability of the FFHN model and the appearance of the HLB. The existence of canard oscillations in the neighborhoods of such HLB points are numerically investigated. Using a new algorithm, referred to as the global-local canard explosion search algorithm, the appearance of various patterns of solutions is revealed, with an increasing number of small-amplitude oscillations when two key parameters of the FFHN model are varied. The numbers of such oscillations versus the two parameters, respectively, are perfectly fitted using exponential functions. Finally, it is conjectured that chaos could occur in a two-dimensional fractional-order autonomous dynamical system, with the fractional order close to one. After all, the article demonstrates that the FFHN model is a very simple two-dimensional model with an incredible ability to present the complex dynamics of neurons.


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