THE ACCURACY OF THE PLATING METHOD FOR ESTIMATING THE NUMBERS OF SOIL BACTERIA, ACTINOMYCES, AND FUNGI IN THE DILUTION PLATED

1939 ◽  
Vol 17c (3) ◽  
pp. 72-86 ◽  
Author(s):  
Norman James ◽  
Marjorie L. Sutherland

During the crop seasons of 1936, 1937, and 1938, 1465 samples of field soil, held in the laboratory one day after crushing, were plated by the recognized technique in four replicates of one dilution for counts of fungi, and of a higher dilution for counts of bacteria and of actinomyces. A χ2 value was calculated for each set or counts. These values for each group of micro-organisms were distributed into classes, and the number in each class was compared with the theoretical for the Poisson series. The data for each year indicate that the fungal counts conform to expectancy on the basis of random sampling, and show that the method provides a reasonably accurate estimate of the population in the dilution plated capable of developing under the conditions of growth. Too many sets of counts of bacteria in each year yield high χ2 values. The counts of actinomyces conform to expectancy.In an attempt to determine the cause of this abnormality for sets of counts of bacteria, samples were plated on the afternoon of the day they were taken from the field. Three hundred and four samples plated in six replicates of one dilution, and another 100 samples plated in four replicates, yield χ2 values whose distributions conform to expectancy. Accordingly, the plate method provides a satisfactory estimate of the bacterial population of soil in the dilution plated if the procedure is carried out within six hours after sampling. Data on 88 samples plated on the day of sampling, on 88 samples held one day, on 88 samples held two to five days, and on 88 samples held eight to thirteen days show that the discrepancy between the actual and theoretical distributions of χ2 values becomes progressively greater at each successive period of holding the samples. Further, the data indicate that the area sampled, the season, the medium used and the technique of plating bear no relation to the abnormal variation in counts of bacteria on replicate plates.A record was kept of the presence of abnormal types of bacterial colonies and various genera of fungi on all plates from 468 samples plated one day after sampling and crushing during 1938. The data show that sets having pin-point colonies or spreading colonies of the Mucorales on one or more plates usually have high χ2 values. Counts on such plates should be excluded from the estimate of the mean number of bacteria in the sample. Likewise, the number of actinomyces colonies on each plate from these samples was recorded. The χ2 values for these counts were found to conform to expectancy, indicating that the factor or factors associated with a large number of high χ2 values for counts of bacteria does not affect the count of actinomyces in the same way.Percentage moisture and P values corresponding to χ2 values for the counts of bacteria obtained each year were correlated. The data yield coefficients that are not significant in each case.

2017 ◽  
Vol 4 (2) ◽  
pp. 87-91
Author(s):  
Ekamaida Ekamaida

The soil fertility aspect is characterized by the good biological properties of the soil. One important element of the soil biological properties is the bacterial population present in it. This research was conducted in the laboratory of Microbiology University of Malikussaleh in the May until June 2016. This study aims to determine the number of bacterial populations in soil organic and inorganic so that can be used as an indicator to know the level of soil fertility. Data analysis was done by T-Test that is by comparing the mean of observation parameter to each soil sample. The sampling method used is a composite method, which combines 9 of soil samples taken from 9 sample points on the same plot diagonally both on organic soil and inorganic soil. The results showed the highest bacterial population was found in total organic soil cfu 180500000 and total inorganic soil cfu 62.500.000


Author(s):  
Thomas Vourc’h ◽  
Julien Léopoldès ◽  
Annick Méjean ◽  
Hassan Peerhossaini

Cyanobacteria are photosynthetic micro-organisms colonizing all aquatic and terrestrial environments. The motility of such living micro-organisms should make their diffusion distinct from typical Brownian motion. This diffusion can be investigated in terms of global behavior (Fickian or not) and in terms of displacement probabilities, which provide more detail about the motility process. Using cyanobacterium Synechocystis sp. PCC 6803 as the model micro-organism, we carry out time-lapse video microscopy to track and analyze the bacteria’s trajectories, from which we compute the mean-squared displacement (MSD) and the distribution function of displacement probabilities. We find that the motility of Synechocystis sp. PCC 6803 is intermittent: high-motility “run” phases are separated by low-motility “tumble” phases corresponding to trapped states. However, this intermittent motility leads to a Fickian diffusive behavior, as shown by the evolution of the MSD with time.


1998 ◽  
Vol 36 (6) ◽  
pp. 1683-1687 ◽  
Author(s):  
John Wain ◽  
To Song Diep ◽  
Vo Anh Ho ◽  
Amanda M. Walsh ◽  
Nguyen Thi Tuyet Hoa ◽  
...  

Salmonella typhi was isolated from 369 andSalmonella paratyphi A was isolated from 6 of 515 Vietnamese patients with suspected enteric fever. Compared with conventional broth culture of blood, direct plating of the buffy coat had a diagnostic sensitivity of 99.5% (95% confidence interval [CI], 97.1 to 100%). Blood bacterial counts were estimated by the pour plate method. The median S. typhi count in blood was 1 CFU/ml (range, <0.3 to 387 CFU/ml), of which a mean of 63% (95% CI, 58 to 67%) were intracellular. The mean number of bacteria per infected leukocyte was 1.3 (interquartile range [IQR], 0.7 to 2.4) CFU/cell (n = 81). Children (<15 years old;n = 115) had higher median blood bacterial counts than adults (n = 262): 1.5 (range, <0.3 to 387) versus 0.6 (range, <0.3 to 17.7) CFU/ml (P = 0.008), and patients who excreted S. typhi in feces had higher bacteremias than those who did not: a median of 3 (range, <0.3 to 32) versus 1 (range, <0.3 to 68) CFU/ml (P = 0.02). Blood bacterial counts declined with increasing duration of illness (P = 0.002) and were higher in infections caused by multidrug-resistant S. typhi (1.3 [range, <0.3 to 387] CFU/ml; n = 313) than in infections caused by antibiotic-sensitive S. typhi (0.5 [range, <0.3 to 32] CFU/ml; n = 62) (P = 0.006). In a multivariate analysis this proved to be an independent association, suggesting a relationship between antibiotic resistance and virulence in S. typhi.


1991 ◽  
Vol 9 (1) ◽  
pp. 149-149
Author(s):  
M. F. He ◽  
Zhangjie

AbstractThe general perturbations of the asteroids of the Flora group (975″ < n < 1150″, n - the mean daily motion) due to Jupiter have been automatically computed on an IBM 4341 computer with the Hansen method by manipulating Broucke’s Symbolic Poisson Series Processor, and the results have been compared with that computed previously with the Bohlin group method.


1965 ◽  
Vol 43 (7) ◽  
pp. 1017-1027 ◽  
Author(s):  
C. Furusaka ◽  
K. Sato

It is of interest to determine how the soil percolation technique may be of use for the elucidation of soil processes from the microbiological viewpoint as well as from the biochemical one. An attempt has been made to correlate the growth of heterotrophic bacteria with their chemical activities when soil is percolated with glycine solution. A very close correlation has been observed between the population number of bacteria and their glycine–oxidizing activity. The physiological status of the population has been investigated. The metabolism of soil organic matter is also induced by the glycine percolation. The soil conditions under which the bacterial population can be considered in connection with their activities are discussed.


1940 ◽  
Vol 18c (7) ◽  
pp. 307-317 ◽  
Author(s):  
M. I. Timonin

The microbial population in the rhizosphere of wheat, oats, alfalfa, and peas was studied and the relative abundance of different types of micro-organisms recorded. By means of the plating method it was found that bacteria and actinomycetes were 7 to 71 times greater in the rhizosphere than in the soil distant from the roots, whereas fungi were but 0.75 to 3.1 times more numerous.Different varieties of plants affected the activity of the various groups of soil micro-organisms differently. Thus fungi were more numerous in the rhizosphere of oats, and bacteria in the rhizosphere of alfalfa. Seventeen genera of fungi were represented in isolates from the rhizosphere of seedlings and the soil distant from the roots. However, no marked difference was observed in the types isolated from the rhizosphere of different varieties of seedlings. A fungus isolated from the rhizosphere of alfalfa proved to be a new species and the genus Spicularia Persoon was amended to include it.


1940 ◽  
Vol 18c (9) ◽  
pp. 444-455 ◽  
Author(s):  
M. I. Timonin

Comparative studies of flax varieties resistant and susceptible respectively to wilt, and of tobacco varieties resistant and susceptible to black root rot, showed higher numbers of micro-organisms in the rhizosphere of the susceptible than of corresponding resistant plants. Though plants of the same variety showed considerable variation in rhizosphere population under field and greenhouse conditions, the general trend remained the same. The abundance of micro-organisms in the rhizosphere of plants of the same variety grown in plots receiving different fertilizer treatment showed relatively little difference, even though the soils varied greatly in productivity.Numbers of micro-organisms in the rhizosphere of flax were greater when the water content of the soil was maintained at 30%, than when held at 60%, of total moisture-holding capacity. However, the microbial population in the soil distant from the roots was lower in the drier soil.Differential counts of fungi and actinomycetes indicated that the number of colonies developing from spores or conidia comprised a small proportion of the total count. Sporulation of fungi was more profuse in soil distant from the plant than in the rhizosphere.The contact slide method indicated a greater number of micro-organisms in the rhizosphere than in soil distant from the roots and showed differences between the rhizosphere of resistant and susceptible varieties which agreed with results from the plating method.


1954 ◽  
Vol 5 (4) ◽  
pp. 702 ◽  
Author(s):  
HR Angell

Soil collected in the Australian Capital Territory was divided into fractions by sieving and subsequent deposition from aqueous suspensions. The greater proportion of the Pythium, and indeed the fungal population, was found, by plating, to be concentrated in the coarser portion of the soil, most of the bacterial population being in the colloidal part. After deposition of the colloids for 4 weeks, and with them the bacteria, a mean of less than one bacterium was plated per ml of supernatant liquid. The separation of bacteria and fungi facilitated the isolation of Pythium. The Pythium population of the surface soil was about 1000 per g. The mean number of isolates of Pythium in 11 other surface soil samples was 1.7 per mg using the fraction sedimenting from an aqueous suspension in 5 min. In similar fractions of soil taken at 18 and 24 in. below the surface the number of Pythium isolates was 3 per 10 mg.


2020 ◽  
Author(s):  
Prakashini Banka ◽  
Catherine Comiskey

AbstractBackgroundAn accurate estimate of the distribution of the incubation period for COVID-19 is the foundational building block for modelling the spread of the SARS COV2 and the effectiveness of mitigation strategies on affected communities. Initial estimates were based on early infections, the aim of this study was to provide an updated estimate and meta-analysis of the incubation period distribution for COVID-19.MethodsThe review was conducted according to the PRISMA Scoping Review guidelines. Five databases were searched; CINAHL, MEDLINE, PUBMED, EMBASE, ASSIA, and Global Index Medicus for studies published between 1 January 2020 - 27 July 2020.ResultsA total of 1,084 articles were identified through the database searches and 1 article was identified through the reference screening of retrieved articles. After screening 64 articles were included. The studies combined had a sample of 45,151 people. The mean of the incubation periods was 6.71 days with 95% CIs ranging from 1 to 12.4 days. The median was 6 days and IQR ranging from 1.8 to 16.3. The resulting parameters for a Gamma Distribution modelling the incubation period were Γ(α, λ) = Γ(2.810,0.419) with mean, μ = α/λ.ConclusionGovernments are planning their strategies on a maximum incubation period of 14 days. While our results are limited to primarily Chinese research studies, the findings highlight the variability in the mean period and the potential for further incubation beyond 14 days. There is an ongoing need for detailed surveillance on the timing of self-isolation periods and related measures protecting communities as incubation periods may be longer.


2008 ◽  
Vol 71 (3) ◽  
pp. 613-615 ◽  
Author(s):  
SOFRONI EGLEZOS ◽  
GARY A. DYKES ◽  
BIXING HUANG ◽  
NARELLE FEGAN ◽  
ED STUTTARD

The bacteriological profile of raw, frozen chicken nuggets manufactured at a chicken processing facility in Queensland, Australia, was determined. Chicken nuggets are manufactured by grinding poultry, adding premixes to incorporate spices, forming the meat to the desired size and shape, applying a batter and breading, freezing, and packaging. A total of 300 frozen batches were analyzed for aerobic plate count, Escherichia coli, and Salmonella over a period of 4 years. The mean of the aerobic plate count was 5.4 log CFU/g, and counts at the 90th, 95th, and 99th percentiles were 5.7, 5.9, and 6.5 log CFU/g, respectively. The maximum number of bacteria detected was 6.6 log CFU/g. E. coli prevalence was 47%, and of the positive samples, the mean was 1.9 log CFU/g; counts at the 90th, 95th, and 99th percentiles were 2.3, 2.4, and 2.8 log CFU/g, respectively. The maximum number of E. coli was 2.9 log CFU/g. The Salmonella prevalence was 8.7%, and 57.7% of these isolates were typed as Salmonella subspecies II 4,12,[27]:b:[e,n,x] (Sofia), a low-virulence serotype well adapted to Australian poultry flocks. There was a significant relationship (P &lt; 0.05) between season and both aerobic plate counts and E. coli counts, and no correlation between E. coli counts and Salmonella prevalence. This study provides valuable data on the bacteriological quality of raw, frozen chicken nuggets.


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