scholarly journals Alterations in Salivary Proteome following Single Twenty-Minute Session of Yogic Breathing

2015 ◽  
Vol 2015 ◽  
pp. 1-10 ◽  
Author(s):  
Sundaravadivel Balasubramanian ◽  
Michael G. Janech ◽  
Graham W. Warren
Keyword(s):  
Mass Spectrometry ◽  
Western Blotting ◽  
Cognitive Processes ◽  
Significant Interaction ◽  
Molecular Level ◽  
Salivary Protein ◽  
Single Session ◽  
Protein Biomarkers ◽  
Yogic Breathing ◽  
Minute Session

Yogic breathing (YB) has been suggested to reduce stress and blood pressure and increase cognitive processes. However, alterations after YB at the molecular level are not well established. Twenty healthy volunteers were randomized into two groups (N=10per group): YB or attention controls (AC). The YB group performed two YB exercises, each for ten minutes, for a total of twenty minutes in a single session. AC group read a text of their choice for 20 minutes. Saliva was collected at baseline and at 5, 10, 15, and 20 minutes. Using Mass Spectrometry (MS), we initially found that 22 proteins were differentially expressed and then validated deleted in malignant brain tumor-1 (DMBT1) and Ig lambda-2 chain C region (IGLC2) using Western Blotting. DMBT1 was elevated in 7 of YB group by 10-fold and 11-fold at 10 and 15 minutes, respectively, whereas it was undetectable in the time-matched AC group (P<0.05). There was a significant interaction between groups and time assessed by two-way ANOVA (P<0.001). IGLC2 also showed a significant increase in YB group as measured by Western Blotting. These data are the first to demonstrate the feasibility of stimulating and detecting salivary protein biomarkers in response to an acute Yoga exercise. This trial is registered with ClincalTrials.govNCT02108769.

scholarly journals Development of a New Highly Selective Monoclonal Antibody against Preferentially Expressed Antigen in Melanoma (PRAME) and Identification of the Target Epitope by Bio-Layer Interferometry

2021 ◽  
Vol 22 (6) ◽  
pp. 3166
Author(s):  
Jwala Priyadarsini Sivaccumar ◽  
Antonio Leonardi ◽  
Emanuela Iaccarino ◽  
Giusy Corvino ◽  
Luca Sanguigno ◽  
...  
Keyword(s):  
Mass Spectrometry ◽  
Monoclonal Antibody ◽  
Monoclonal Antibodies ◽  
Western Blotting ◽  
Cancer Biomarkers ◽  
Trypsin Digestion ◽  
Protein Fragments ◽  
Target Epitope ◽  
Potential Activity ◽  
Antibody Epitopes

Background: Monoclonal antibodies (mAbs) against cancer biomarkers are key reagents in diagnosis and therapy. One such relevant biomarker is a preferentially expressed antigen in melanoma (PRAME) that is selectively expressed in many tumors. Knowing mAb’s epitope is of utmost importance for understanding the potential activity and therapeutic prospective of the reagents. Methods: We generated a mAb against PRAME immunizing mice with PRAME fragment 161–415; the affinity of the antibody for the protein was evaluated by ELISA and SPR, and its ability to detect the protein in cells was probed by cytofluorimetry and Western blotting experiments. The antibody epitope was identified immobilizing the mAb on bio-layer interferometry (BLI) sensor chip, capturing protein fragments obtained following trypsin digestion and performing mass spectrometry analyses. Results: A mAb against PRAME with an affinity of 35 pM was obtained and characterized. Its epitope on PRAME was localized on residues 202–212, taking advantage of the low volumes and lack of fluidics underlying the BLI settings. Conclusions: The new anti-PRAME mAb recognizes the folded protein on the surface of cell membranes suggesting that the antibody’s epitope is well exposed. BLI sensor chips can be used to identify antibody epitopes.

Molecular-level heavy petroleum hydrotreating modeling and comparison with high-resolution mass spectrometry

Fuel ◽  
2021 ◽  
Vol 297 ◽  
pp. 120792
Author(s):  
Dong Guan ◽  
Zhengyu Chen ◽  
Xiu Chen ◽  
Ying Zhang ◽  
Qiuyan Qi ◽  
...  
Keyword(s):  
Mass Spectrometry ◽  
High Resolution ◽  
Molecular Level ◽  
High Resolution Mass Spectrometry ◽  
Heavy Petroleum ◽  
High Resolution Mass ◽  
Resolution Mass

MiS-MALDI: microgel-selected detection of protein biomarkers by MALDI-ToF mass spectrometry

2010 ◽  
Vol 6 (11) ◽  
pp. 2214 ◽  
Author(s):  
Eleonora Cerasoli ◽  
Paulina D. Rakowska ◽  
Adrian Horgan ◽  
Jascindra Ravi ◽  
Melanie Bradley ◽  
...  
Keyword(s):  
Mass Spectrometry ◽  
Protein Biomarkers ◽  
Maldi Tof Mass Spectrometry ◽  
Maldi Tof

Magnetic Bead-Based Salivary Peptidome Profiling Analysis for Severe Early Childhood Caries

2014 ◽  
Vol 49 (1) ◽  
pp. 63-69 ◽  
Author(s):  
Yan Si ◽  
Shuang Ao ◽  
Weijian Wang ◽  
Feng Chen ◽  
Shuguo Zheng
Keyword(s):  
Mass Spectrometry ◽  
Early Childhood ◽  
Early Childhood Caries ◽  
Expression Profiles ◽  
Salivary Protein ◽  
Preschool Age ◽  
Diagnostic Model ◽  
Peptide Mass ◽  
Severe Early Childhood Caries ◽  
Childhood Caries

Objective: To investigate the differential salivary protein expression profiles between children with severe early childhood caries (S-ECC) and caries-free (CF) children at the age of 3 years. Methods: We used matrix-assisted laser desorption/ionization time-of-flight mass spectrometry (MALDI-TOF MS) combined with weak cation exchange magnetic beads, and peptide mass fingerprints were created by scanning mass spectrometry signals. Salivary samples from 20 children were analyzed (10 for each group). Results: Eleven protein peaks were significantly different (p < 0.05) between the two groups. Eight of these peaks were higher in the S-ECC group and three were higher in the CF group. To establish a diagnostic model for discrimination between the two groups, we chose three peptides (3,186.2, 3,195.8 and 3,324.8 Da) that exhibited the best fitted curve, by which the two groups were better separated when compared with other combinations. Conclusions: The salivary biomarkers identified revealed significant differences between the CF and the S-ECC group. Our results provide novel insight into the salivary protein profile of preschool-age children with dental caries and may lead to the development of a new strategy for screening high-risk populations.

Recent Studies and Patents in Salivary Protein Biomarkers for Diabetes

2012 ◽  
Vol 2 (1) ◽  
pp. 1-5 ◽  
Author(s):  
Sompop Bencharit ◽  
Charles R. Mack ◽  
Escher L. Howard-Williams
Keyword(s):  
Salivary Protein ◽  
Protein Biomarkers

scholarly journals Spatiotemporal transformation of dissolved organic matter along an alpine stream flow path on the Qinghai–Tibet Plateau: importance of source and permafrost degradation

2018 ◽  
Vol 15 (21) ◽  
pp. 6637-6648 ◽  
Author(s):  
Yinghui Wang ◽  
Robert G. M. Spencer ◽  
David C. Podgorski ◽  
Anne M. Kellerman ◽  
Harunur Rashid ◽  
...  
Keyword(s):  
Mass Spectrometry ◽  
Organic Matter ◽  
Dissolved Organic Matter ◽  
Molecular Level ◽  
Tibet Plateau ◽  
Permafrost Degradation ◽  
Hydrological Conditions ◽  
14C Age ◽  
Alpine Stream ◽  
Qinghai Tibet Plateau

Abstract. The Qinghai–Tibet Plateau (QTP) accounts for approximately 70 % of global alpine permafrost and is an area sensitive to climate change. The thawing and mobilization of ice-rich and organic-carbon-rich permafrost impact hydrologic conditions and biogeochemical processes on the QTP. Despite numerous studies of Arctic permafrost, there are no reports to date for the molecular-level in-stream processing of permafrost-derived dissolved organic matter (DOM) on the QTP. In this study, we examine temporal and spatial changes of DOM along an alpine stream (3850–3207 m above sea level) by Fourier transform ion cyclotron resonance mass spectrometry (FT-ICR MS), accelerator mass spectrometry (AMS) and UV–visible spectroscopy. Compared to downstream sites, dissolved organic matter (DOM) at the headstream site exhibited older radiocarbon age, higher mean molecular weight, higher aromaticity and fewer highly unsaturated compounds. At the molecular level, 6409 and 1345 formulas were identified as unique to the active layer (AL) leachate and permafrost layer (PL) leachate, respectively. Comparing permafrost leachates to the downstream site, 59 % of AL-specific formulas and 90 % of PL-specific formulas were degraded, likely a result of rapid in-stream degradation of permafrost-derived DOM. From peak discharge in the summer to low flow in late autumn, the DOC concentration at the headstream site decreased from 13.9 to 10.2 mg L−1, while the 14C age increased from 745 to 1560 years before present (BP), reflecting an increase in the relative contribution of deep permafrost carbon due to the effect of changing hydrological conditions over the course of the summer on the DOM source (AL vs. PL). Our study thus demonstrates that hydrological conditions impact the mobilization of permafrost carbon in an alpine fluvial network, the signature of which is quickly lost through in-stream mineralization and transformation.

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