scholarly journals Assessing the Functional Heterogeneity of Monocytes in Human Septic Shock: a Proof-of-Concept Microfluidic Assay of TNFα Secretion

2021 ◽  
Vol 12 ◽  
Author(s):  
Jean-François Llitjos ◽  
Yacine Bounab ◽  
Christophe Rousseau ◽  
Sophie Dixneuf ◽  
Blandine Rimbault ◽  
...  

ObjectiveThe development of advanced single-cell technologies to decipher inter-cellular heterogeneity has enabled the dynamic assessment of individual cells behavior over time, overcoming the limitation of traditional assays. Here, we evaluated the feasibility of an advanced microfluidic assay combined to fluorescence microscopy to address the behavior of circulating monocytes from septic shock patients.MethodsSeven septic shock patients and ten healthy volunteers were enrolled in the study. Using the proposed microfluidic assay we investigated the production over time of LPS-elicited TNFα by single monocytes encapsulated within droplets. Cellular endocytic activity was assessed by internalization of magnetic nanoparticles. Besides, we assessed HLA-DR membrane expression and LPS-induced TNFα production in monocytes through classical flow cytometry assays.ResultsConsistent with the flow cytometry results, the total number of TNFα molecules secreted by encapsulated single monocytes was significantly decreased in septic shock patients compared to healthy donors. TNFα production was dampened as soon as 30 and 60 minutes after LPS stimulation in monocytes from septic patients. Furthermore, the microfluidic assay revealed heterogeneous individual behavior of monocytes from septic shock patients. Of note, monocytes from both healthy donors and patients exhibited similar phagocytic activities over time.ConclusionThe microfluidic assay highlights the functional heterogeneity of monocytes, and provides in-depth resolution in assessing the hallmark monocyte deactivation encountered in post-septic immunosuppression.

2019 ◽  
Vol 66 (1) ◽  
pp. 229-238 ◽  
Author(s):  
Tracie Profaizer ◽  
Patricia Slev

Abstract BACKGROUND T-cell receptor excision circles (TREC) and κ-deleting recombination receptor excision circles (KREC) concentrations can be used to assess and diagnose immune deficiencies, monitor thymic and bone marrow immune reconstitution, or follow responses to drug therapy. We developed an assay to quantify TREC, KREC, and a reference gene in a single reaction using droplet digital PCR (ddPCR). METHODS PCR was optimized for 3 targets: TREC, KREC, and ribonuclease P/MRP subunit p30 (RPP30) as the reference gene. Multiplexing was accomplished by varying the target's fluorophore and concentration. Correlation with clinical results was evaluated using 47 samples from healthy donors, 59 samples with T-cell and B-cell markers within the reference interval from the flow cytometry laboratory, 20 cord blood samples, and 34 samples submitted for exome sequencing for severe combined immunodeficiency disease (SCID). RESULTS The limit of the blank was 4 positive droplets, limit of detection 9 positive droplets, and limit of quantification 25 positive droplets, or 2.0 copies/μL. TREC and KREC copies/μL were as expected in the healthy donors and cord blood samples and concordant with the healthy flow cytometry results. Of the samples from the SCID Panel, 56.5% had a TREC count <20 copies/μL and 17.7% had a KREC count <20 copies/μL, suggestive of low T- and B-cell numbers, respectively. CONCLUSIONS Our multiplex ddPCR assay is an analytically sensitive and specific method for the absolute quantification of TREC and KREC. To the best of our knowledge, this paper is the first to describe the simultaneous quantification of TREC, KREC, and a reference gene by use of ddPCR.


2020 ◽  
Author(s):  
Etienne Becht ◽  
Daniel Tolstrup ◽  
Charles-Antoine Dutertre ◽  
Florent Ginhoux ◽  
Evan W. Newell ◽  
...  

AbstractModern immunologic research increasingly requires high-dimensional analyses in order to understand the complex milieu of cell-types that comprise the tissue microenvironments of disease. To achieve this, we developed Infinity Flow combining hundreds of overlapping flow cytometry panels using machine learning to enable the simultaneous analysis of the co-expression patterns of 100s of surface-expressed proteins across millions of individual cells. In this study, we demonstrate that this approach allows the comprehensive analysis of the cellular constituency of the steady-state murine lung and to identify novel cellular heterogeneity in the lungs of melanoma metastasis bearing mice. We show that by using supervised machine learning, Infinity Flow enhances the accuracy and depth of clustering or dimensionality reduction algorithms. Infinity Flow is a highly scalable, low-cost and accessible solution to single cell proteomics in complex tissues.


2019 ◽  
pp. 303-312
Author(s):  
Amal Jmaii

This paper focus on the determinants of poverty dynamics in Tunisia by performing a two-stage endogenous model using a Bayesian algorithm to avoid missing data. Based on this approach author show that panel data analysis can be performed through potential variables such presented by the work of Donald B. Rubin. This contribution is rather empirical; researcher propose a method based on the concept of causal inference that enable to execute a panel data model using independent surveys. As the author assert the dependence between poverty status over time, they choose to use an endogenous switching model take into consideration the form of endogeneity caused by initial condition.


Microbiome ◽  
2020 ◽  
Vol 8 (1) ◽  
Author(s):  
Alicia Moreno-Sabater ◽  
Gaelle Autaa ◽  
Delphine Sterlin ◽  
Amenie Jerbi ◽  
Remy Villette ◽  
...  

Abstract Background Interest for the study of gut mycobiota in relation with human health and immune homeostasis has increased in the last years. From this perspective, new tools to study the immune/fungal interface are warranted. Systemic humoral immune responses could reflect the dynamic relationships between gut mycobiota and immunity. Using a novel flow cytometry technology (Fungi-Flow) to determine immunoglobulin (Ig) responses to fungi, we studied the relationships between gut mycobiota and systemic humoral anti-commensal immunity. Results The Fungi-Flow method allows a sensitive and specific measurement of systemic IgG responses against 17 commensal and environmental fungi from the two main divisions; Ascomycota and Basidiomycota. IgG responses exhibited a high inter-individual variability. Anti-commensal IgG responses were contrasted with the relative abundance, alpha-diversity, and intra-genus richness of fungal species in gut mycobiota of twenty healthy donors. Categorization of gut mycobiota composition revealed two differentiated fungal ecosystems. Significant difference of anti-Saccharomyces systemic IgG responses were observed in healthy donors stratified according to the fungal ecosystem colonizing their gut. A positive and significant correlation was observed between the variety of IgG responses against fungal commensals and intestinal alpha-diversity. At the level of intra-genus species richness, intense IgG responses were associated with a low intra-genus richness for known pathobionts, but not commensals. Conclusions Fungi-Flow allows an easy and reliable measure of personalized humoral responses against commensal fungi. Combining sequencing technology with our novel Fungi-Flow immunological method, we propose that there are at least two defined ecosystems in the human gut mycobiome associated with systemic humoral responses. Fungi-Flow opens new opportunities to improve our knowledge about the impact of mycobiota in humoral anti-commensal immunity and homeostasis.


2002 ◽  
Vol 48 (9) ◽  
pp. 1589-1592 ◽  
Author(s):  
Guillaume Monneret ◽  
Nadia Elmenkouri ◽  
Julien Bohe ◽  
Anne-Lise Debard ◽  
Marie-Claude Gutowski ◽  
...  

Blood ◽  
2010 ◽  
Vol 115 (1) ◽  
pp. 78-88 ◽  
Author(s):  
Nathalie Droin ◽  
Arnaud Jacquel ◽  
Jean-Baptiste Hendra ◽  
Cindy Racoeur ◽  
Caroline Truntzer ◽  
...  

Abstract Chronic myelomonocytic leukemia (CMML) is a clonal hematopoietic disorder that occurs in elderly patients. One of the main diagnostic criteria is the accumulation of heterogeneous monocytes in the peripheral blood. We further explored this cellular heterogeneity and observed that part of the leukemic clone in the peripheral blood was made of immature dysplastic granulocytes with a CD14−/CD24+ phenotype. The proteome profile of these cells is dramatically distinct from that of CD14+/CD24− monocytes from CMML patients or healthy donors. More specifically, CD14−/CD24+ CMML cells synthesize and secrete large amounts of alpha-defensin 1-3 (HNP1-3). Recombinant HNPs inhibit macrophage colony-stimulating factor (M-CSF)–driven differentiation of human peripheral blood monocytes into macrophages. Using transwell, antibody-mediated depletion, suramin inhibition of purinergic receptors, and competitive experiments with uridine diphosphate (UDP)/uridine triphosphate (UTP), we demonstrate that HNP1-3 secreted by CD14−/CD24+ cells inhibit M-CSF–induced differentiation of CD14+/CD24− cells at least in part through P2Y6, a receptor involved in macrophage differentiation. Altogether, these observations suggest that a population of immature dysplastic granulocytes contributes to the CMML phenotype through production of alpha-defensins HNP1-3 that suppress the differentiation capabilities of monocytes.


2020 ◽  
Vol 21 (13) ◽  
pp. 4649
Author(s):  
Sarah A. Overall ◽  
Lauren E. Price ◽  
Brice J. Albert ◽  
Chukun Gao ◽  
Nicholas Alaniva ◽  
...  

We demonstrate for the first time in-cell dynamic nuclear polarization (DNP) in conjunction with flow cytometry sorting to address the cellular heterogeneity of in-cell samples. Utilizing a green fluorescent protein (GFP) reporter of HIV reactivation, we correlate increased 15N resonance intensity with cytokine-driven HIV reactivation in a human cell line model of HIV latency. As few as 10% GFP+ cells could be detected by DNP nuclear magnetic resonance (NMR). The inclusion of flow cytometric sorting of GFP+ cells prior to analysis by DNP-NMR further boosted signal detection through increased cellular homogeneity with respect to GFP expression. As few as 3.6 million 15N-labeled GFP+ cells could be readily detected with DNP-NMR. Importantly, cell sorting allowed for the comparison of cytokine-treated GFP+ and GFP− cells in a batch-consistent way. This provides an avenue for normalizing NMR spectral contributions from background cellular processes following treatment with cellular modulators. We also demonstrate the remarkable stability of AMUPol (a nitroxide biradical) in Jurkat T cells and achieved in-cell enhancements of 46 with 10 mM AMUPol, providing an excellent model system for further in-cell DNP-NMR studies. This represents an important contribution to improving in-cell methods for the study of endogenously expressed proteins by DNP-NMR.


2019 ◽  
Vol 19 (1) ◽  
Author(s):  
Carolina V. Messias ◽  
Julia P. Lemos ◽  
Daniela P. Cunha ◽  
Zilton Vasconcelos ◽  
Lidiane M. S. Raphael ◽  
...  

Abstract Background Zika virus (ZIKV) infection gained public health concern after the 2015 outbreak in Brazil, when microcephaly rates increased in babies born from infected mothers. It was demonstrated that ZIKV causes a congenital Zika virus syndrome, including various alterations in the development of the central nervous system. Although the infection of cells from the nervous system has been well documented, less is known in respect of ZIKV ability to infect immune cells. Herein, we investigated if peripheral blood mononuclear cells (PBMCs), freshly-isolated from healthy donors, could be infected by ZIKV. Methods PBMCs from healthy donors were isolated and cultured in medium with ZIKV strain Rio-U1 (MOI = 0.1). Infection was analyzed by RT-qPCR and flow cytometry. Results We detected the ZIKV RNA in PBMCs from all donors by RT-qPCR analysis. The detection of viral antigens by flow cytometry revealed that PBMC from more than 50% the donors were infected by ZIKV, with CD3+CD4+ T cells, CD3−CD19+ B cells and CD3+CD8+ T cells being, respectively, the most frequently infected subpopulations, followed by CD14+ monocytes. Additionally, we observed high variability in PBMC infection rates among different donors, either by numbers or type infected cells. Conclusions These findings raise the hypothesis that PBMCs can act as a reservoir of the virus, which may facilitate viral dissemination to different organs, including immune-privileged sites.


Shock ◽  
2016 ◽  
Vol 46 (4) ◽  
pp. 373-381 ◽  
Author(s):  
Georg Franz Lehner ◽  
Ulrich Harler ◽  
Viktoria Maria Haller ◽  
Clemens Feistritzer ◽  
Julia Hasslacher ◽  
...  

Blood ◽  
2009 ◽  
Vol 114 (22) ◽  
pp. 3737-3737
Author(s):  
Feda Azab ◽  
Abdel Kareem Azab ◽  
Aldo M. Roccaro ◽  
Antonio Sacco ◽  
Phong Quang ◽  
...  

Abstract Abstract 3737 Poster Board III-673 INTRODUCTION Waldenström macroglobulinemia (WM) is a low grade non-Hodgkin lymphoma, characterized by the presence of abnormal lymphoplasmacytic cells producing high levels of IgM. Although indolent, WM remains incurable, and therefore, there is an urgent need for rationally designed therapy in WM. Receptor tyrosine kinases (RTKs) are cell surface receptors for growth factors, cytokines and hormones which have a critical role in the development and progression of many types of cancer. However, their role in WM was not identified. TKI-258 (Novartis, Basel, Switzerland) is an ATP-competitive inhibitor with activity against (multiple) receptor tyrosine kinases including FGFR and other RTKs. We hypothesized that FGFR is up-regulated in WM and plays a major role in its progression; and that TKI-258 would reduce tumor progression in WM. METHODS AND RESULTS We tested the expression of FGFR3 on WM cells and found overexpression of this RTK compared to CD19+ cells from healthy donors. The activation of FGFR3 by recombinant FGF induced MAPK signaling pathway in WM cells including phosphorylation of RAF, ERK and STAT3. Also it induced PI3K signaling including phosphorylation of AKT, S6R and GSK3. TKI-258 inhibited the FGF induced activation of the MAPK and PI3K signaling pathways in a dose- response manner. Using MTT assay we tested the effect of TKI-258 ( 0 to 2.5 uM) on the survival of WM cell line BCWM-1, on IgM secreting cell line MEC-1, and on CD19+ cells selected from WM patient sample. We found that the TKI-258 induced cell death in all sample tested with an IC50 ranging 0.8-1 uM. Testing the effect of TKI-258 on the survival of CD19+ cells selected from peripheral blood or mononuclear cell from healthy donors showed a minimal effect of less than 10% cell death. These results provide a wide therapeutic window for the use of TKI-258 in WM. Moreover, we tested the effect of TKI-258 on the apoptosis of WM cells by flow cytometry using the apoptosis marker APO-2.7, and found that TKI-258 induced apoptosis of WM cells in a dose-response manner at both 24 and 48 treatment. Moreover these results were confirmed by testing changes in the expression of apoptosis related proteins in response to TKI-258 by immunoblotting, including induction of PARP, and caspase-3 and caspase-9 cleavage. In correlation with these results, cell cycle analysis by PI staining and analysis by flow cytometry of WM cells treated with TKI-258 for 24 hrs showed induction of sub-G1 increase in a dose response manner with an IC50 about 1uM. To test the effect of TKI-258 on the interaction of WM cells with the microenvironment we examined the effect of TKI-258 on adhesion of WM cells to fibronectin and bone marrow stromal cells (BMSCs), and found that TKI-258 induced a 50% decrease of adhesion. Moreover, we found no effect on the chemotaxis of WM induce by stroma derived factor-1 (SDF1). To test the direct effect of TKI-258 on the interaction with the microenvironment, we examined the proliferation of WM when cultured alone of in co-culture with BMSCs by 3H-thymidine uptake assay. We showed that TKI-258 inhibited the proliferation of WM cells with an IC50 of 0.8 uM, in the presence or absence of BMSCs. CONCLUSION In conclusion, we found an overexpression of FGFR3 in WM cells compared to CD19+ cells from healthy donors, and that TKI-258 inhibited the activation of proliferative pathways induced by activation of FGFR3 and led to inhibition of proliferation and apoptosis of WM cells. Disclosures: Ghobrial: Millennium: Honoraria, Research Funding, Speakers Bureau; Celgene: Consultancy, Honoraria, Speakers Bureau; Novartis: Honoraria, Speakers Bureau.


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