OXS2 is Required for Salt Tolerance Mainly through Associating with Salt Inducible Genes, CA1 and Araport11, in Arabidopsis

AbstractSalt stress is one of the abiotic stresses affecting crop growth and yield. The functional screening and mechanism investigation of the genes in response to salt stress are essential for the development of salt-tolerant crops. Here, we found that OXIDATIVE STRESS 2 (OXS2) was a salinity-induced gene, and the mutant oxs2-1 was hypersensitive to salt stress during seed germination and root elongation processes. In the absence of stress, OXS2 was predominantly localized in the cytoplasm; when the plants were treated with salt, OXS2 entered the nuclear. Further RNA-seq analysis and qPCR identification showed that, in the presence of salt stress, a large number of differentially expressed genes (DEGs) were activated, which contain BOXS2 motifs previously identified as the binding element for AtOXS2. Further ChIP analysis revealed that, under salt stress, OXS2 associated with CA1 and Araport11 directly through binding the BOXS2 containing fragments in the promoter regions. In conclusion, our results indicate that OXS2 is required for salt tolerance in Arabidopsis mainly through associating with the downstream CA1 and Araport11 directly.

Download Full-text

Characterization of Maize Hybrids (Zea mays L.) for Detecting Salt Tolerance Based on Morpho-Physiological Characteristics, Ion Accumulation and Genetic Variability at Early Vegetative Stage

Plants ◽

10.3390/plants10112549 ◽

2021 ◽

Vol 10 (11) ◽

pp. 2549

Author(s):

Md Al Samsul Huqe ◽

Md Sabibul Haque ◽

Ashaduzzaman Sagar ◽

Md Nesar Uddin ◽

Md Alamgir Hossain ◽

...

Keyword(s):

Multivariate Analysis ◽

Salt Stress ◽

Salt Tolerance ◽

Dry Weight ◽

Ion Accumulation ◽

Growth And Yield ◽

Tolerance Index ◽

Salt Tolerant ◽

Maize Cultivars ◽

Root Shoot Ratio

Increasing soil salinity due to global warming severely restricts crop growth and yield. To select and recommend salt-tolerant cultivars, extensive genotypic screening and examination of plants’ morpho-physiological responses to salt stress are required. In this study, 18 prescreened maize hybrid cultivars were examined at the early growth stage under a hydroponic system using multivariate analysis to demonstrate the genotypic and phenotypic variations of the selected cultivars under salt stress. The seedlings of all maize cultivars were evaluated with two salt levels: control (without NaCl) and salt stress (12 dS m−1 simulated with NaCl) for 28 d. A total of 18 morpho-physiological and ion accumulation traits were dissected using multivariate analysis, and salt tolerance index (STI) values of the examined traits were evaluated for grouping of cultivars into salt-tolerant and -sensitive groups. Salt stress significantly declined all measured traits except root–shoot ratio (RSR), while the cultivars responded differently. The cultivars were grouped into three clusters and the cultivars in Cluster-1 such as Prabhat, UniGreen NK41, Bisco 51, UniGreen UB100, Bharati 981 and Star Beej 7Star exhibited salt tolerance to a greater extent, accounting for higher STI in comparison to other cultivars grouped in Cluster-2 and Cluster-3. The high heritability (h2bs, >60%) and genetic advance (GAM, >20%) were recorded in 13 measured traits, indicating considerable genetic variations present in these traits. Therefore, using multivariate analysis based on the measured traits, six hybrid maize cultivars were selected as salt-tolerant and some traits such as Total Fresh Weight (TFW), Total Dry Weight (TDW), Total Na+, Total K+ contents and K+–Na+ Ratio could be effectively used for the selection criteria evaluating salt-tolerant maize genotypes at the early seedling stage.

Download Full-text

Genome-wide association and differential expression analysis of salt tolerance in Gossypium hirsutum L at the germination stage

BMC Plant Biology ◽

10.1186/s12870-019-1989-2 ◽

2019 ◽

Vol 19 (1) ◽

Cited By ~ 4

Author(s):

Yanchao Yuan ◽

Huixian Xing ◽

Wenguan Zeng ◽

Jialing Xu ◽

Lili Mao ◽

...

Keyword(s):

Salt Stress ◽

Salt Tolerance ◽

Candidate Genes ◽

Upland Cotton ◽

Differentially Expressed ◽

Genome Wide Association ◽

Rna Seq ◽

Salt Tolerant ◽

Genome Wide ◽

Germination Stage

Abstract Background Salinity is a major abiotic stress seriously hindering crop yield. Development and utilization of tolerant varieties is the most economical way to address soil salinity. Upland cotton is a major fiber crop and pioneer plant on saline soil and thus its genetic architecture underlying salt tolerance should be extensively explored. Results In this study, genome-wide association analysis and RNA sequencing were employed to detect salt-tolerant qualitative-trait loci (QTLs) and candidate genes in 196 upland cotton genotypes at the germination stage. Using comprehensive evaluation values of salt tolerance in four environments, we identified 33 significant single-nucleotide polymorphisms (SNPs), including 17 and 7 SNPs under at least two and four environments, respectively. The 17 stable SNPs were located within or near 98 candidate genes in 13 QTLs, including 35 genes that were functionally annotated to be involved in salt stress responses. RNA-seq analysis indicated that among the 98 candidate genes, 13 were stably differentially expressed. Furthermore, 12 of the 13 candidate genes were verified by qRT-PCR. RNA-seq analysis detected 6640, 3878, and 6462 differentially expressed genes at three sampling time points, of which 869 were shared. Conclusions These results, including the elite cotton accessions with accurate salt tolerance evaluation, the significant SNP markers, the candidate genes, and the salt-tolerant pathways, could improve our understanding of the molecular regulatory mechanisms under salt stress tolerance and genetic manipulation for cotton improvement.

Download Full-text

Identification of novel source of salt tolerance in local bread wheat germplasm using morpho-physiological and biochemical attributes

Scientific Reports ◽

10.1038/s41598-021-90280-w ◽

2021 ◽

Vol 11 (1) ◽

Author(s):

Nadeem Hussain ◽

Abdul Ghaffar ◽

Zafar Ullah Zafar ◽

Muhammad Javed ◽

Kausar Hussain Shah ◽

...

Keyword(s):

Salt Stress ◽

Salt Tolerance ◽

Photosynthetic Activity ◽

Wheat Breeding ◽

Molecular Techniques ◽

Growth And Yield ◽

Wheat Cultivars ◽

Salt Tolerant ◽

Wheat Germplasm ◽

Salt Exclusion

AbstractSalt tolerant wheat cultivars may be used as genetic resource for wheat breeding to ensure yield stability in future. The study was aimed to select salt tolerant cultivar(s) to identify novel source of salt tolerance in local wheat germplasm. Initially, 40 local wheat cultivars were screened at 150 mM NaCl stress at seedling stage. Selected salt-tolerant (three; S-24, LU-26S and Pasban-90) and salt-sensitive (four; MH-97, Kohistan-97, Inqilab-91 and Iqbal-2000) wheat cultivars were further evaluated using growth, yield, biochemical and physiological attributes. Growth and yield of selected cultivars were reduced under salt stress due to decline in plant water status, limited uptake of macronutrients (N, P and K), reduced K+/Na+ ratio, photosynthetic pigments and quantum yield of PSII. Wheat plants tried to acclimate salt stress by osmotic adjustment (accumulation of total soluble sugars, proline and free amino acids). Degree of salinity tolerance in cvs. S-24 and LU-26S found to be associated with maintenance of K+/Na+ ratio, osmo-protectant and photosynthetic activity and can be used as donor for salt tolerance in wheat breeding program at least in Pakistan. These cultivars can be further characterized using molecular techniques to identify QTLs/genes for salt exclusion, osmo-protectant and photosynthetic activity for molecular breeding.

Download Full-text

Genetic Potential for Salt Tolerance During Germination in Lycopersicon Species

HortScience ◽

10.21273/hortsci.32.2.296 ◽

1997 ◽

Vol 32 (2) ◽

pp. 296-300 ◽

Cited By ~ 46

Author(s):

M.R. Foolad ◽

G.Y. Lin

Keyword(s):

Salt Stress ◽

Salt Tolerance ◽

Genotypic Variation ◽

Control Treatment ◽

Molar Ratio ◽

Wild Accession ◽

Salt Tolerant ◽

Plant Introductions ◽

Genetic Potential ◽

Stress Levels

Seed of 42 wild accessions (Plant Introductions) of Lycopersicon pimpinellifolium Jusl., 11 cultigens (cultivated accessions) of L. esculentum Mill., and three control genotypes [LA716 (a salt-tolerant wild accession of L. pennellii Corr.), PI 174263 (a salt-tolerant cultigen), and UCT5 (a salt-sensitive breeding line)] were evaluated for germination in either 0 mm (control) or 100 mm synthetic sea salt (SSS, Na+/Ca2+ molar ratio equal to 5). Germination time increased in response to salt-stress in all genotypes, however, genotypic variation was observed. One accession of L. pimpinellifolium, LA1578, germinated as rapidly as LA716, and both germinated more rapidly than any other genotype under salt-stress. Ten accessions of L. pimpinellifolium germinated more rapidly than PI 174263 and 35 accessions germinated more rapidly than UCT5 under salt-stress. The results indicate a strong genetic potential for salt tolerance during germination within L. pimpinellifolium. Across genotypes, germination under salt-stress was positively correlated (r = 0.62, P < 0.01) with germination in the control treatment. The stability of germination response at diverse salt-stress levels was determined by evaluating germination of a subset of wild, cultivated accessions and the three control genotypes at 75, 150, and 200 mm SSS. Seeds that germinated rapidly at 75 mm also germinated rapidly at 150 mm salt. A strong correlation (r = 0.90, P < 0.01) existed between the speed of germination at these two salt-stress levels. At 200 mm salt, most accessions (76%) did not reach 50% germination by 38 days, demonstrating limited genetic potential within Lycopersicon for salt tolerance during germination at this high salinity.

Download Full-text

Physiological and transcriptomic analyses reveal the mechanisms underlying the salt tolerance of Zoysia japonica Steud.

10.21203/rs.2.16313/v3 ◽

2020 ◽

Author(s):

Jingjing Wang ◽

Cong An ◽

Hailin Guo ◽

Xiangyang Yang ◽

Jingbo Chen ◽

...

Keyword(s):

Signal Transduction ◽

Salt Stress ◽

Stress Response ◽

Salt Tolerance ◽

Molecular Mechanisms ◽

Salt Tolerant ◽

Zoysia Japonica ◽

Salt Stress Response ◽

Leaves And Roots ◽

Time Point

Abstract Background: Areas with saline soils are sparsely populated and have fragile ecosystems, which severely restricts the sustainable development of local economies. Zoysia grasses are recognized as excellent warm-season turfgrasses worldwide, with high salt tolerance and superior growth in saline-alkali soils. However, the mechanism underlying the salt tolerance of Zoysia species remains unknown. Results: The phenotypic and physiological responses of two contrasting materials, Zoysia japonica Steud. Z004 (salt sensitive) and Z011 (salt tolerant) in response to salt stress were studied. The results show that Z011 was more salt tolerant than was Z004, with the former presenting greater K+/Na+ ratios in both its leaves and roots. To study the molecular mechanisms underlying salt tolerance further, we compared the transcriptomes of the two materials at different time points (0 h, 1 h, 24 h, and 72 h) and from different tissues (leaves and roots) under salt treatment. The 24-h time point and the roots might make significant contributions to the salt tolerance. Moreover, GO and KEGG analyses of different comparisons revealed that the key DEGs participating in the salt-stress response belonged to the hormone pathway, various TF families and the DUF family. Conclusions: Z011 may have improved salt tolerance by reducing Na+ transport from the roots to the leaves, increasing K+ absorption in the roots and reducing K+ secretion from the leaves to maintain a significantly greater K+/Na+ ratio. Twenty-four hours might be a relatively important time point for the salt-stress response of zoysiagrass. The auxin signal transduction family, ABA signal transduction family, WRKY TF family and bHLH TF family may be the most important families in Zoysia salt-stress regulation. This study provides fundamental information concerning the salt-stress response of Zoysia and improves the understanding of molecular mechanisms in salt-tolerant plants.

Download Full-text

The full-length transcriptome of Spartina alterniflora reveals the complexity of high salt tolerance in monocotyledonous halophyte

10.1101/680819 ◽

2019 ◽

Cited By ~ 2

Author(s):

Wenbin Ye ◽

Taotao Wang ◽

Wei Wei ◽

Shuaitong Lou ◽

Faxiu Lan ◽

...

Keyword(s):

Gene Expression ◽

Salt Stress ◽

Alternative Splicing ◽

Salt Tolerance ◽

Protein Kinases ◽

Spartina Alterniflora ◽

High Salt ◽

Full Length ◽

Salt Tolerant ◽

High Salt Tolerance

ABSTRACTSpartina alterniflora (Spartina) is the only halophyte in the salt marsh. However, the molecular basis of its high salt tolerance remains elusive. In this study, we used PacBio full-length single molecule long-read sequencing and RNA-seq to elucidate the transcriptome dynamics of high salt tolerance in Spartina by salt-gradient experiments (0, 350, 500 and 800 mM NaCl). We systematically analyzed the gene expression diversity and deciphered possible roles of ion transporters, protein kinases and photosynthesis in salt tolerance. Moreover, the co-expression network analysis revealed several hub genes in salt stress regulatory networks, including protein kinases such as SaOST1, SaCIPK10 and three SaLRRs. Furthermore, high salt stress affected the gene expression of photosynthesis through down-regulation at the transcription level and alternative splicing at the post-transcriptional level. In addition, overexpression of two Spartina salt-tolerant genes SaHSP70-I and SaAF2 in Arabidopsis significantly promoted the salt tolerance of transgenic lines. Finally, we built the SAPacBio website for visualizing the full-length transcriptome sequences, transcription factors, ncRNAs, salt-tolerant genes, and alternative splicing events in Spartina. Overall, this study sheds light on the high salt tolerance mechanisms of monocotyledonous-halophyte and demonstrates the potential of Spartina genes for engineering salt-tolerant plants.

Download Full-text

Beyond the greenhouse: coupling environmental and salt stress response reveals unexpected global transcriptional regulatory networks in Salicornia bigelovii

10.1101/2020.03.17.995720 ◽

2020 ◽

Author(s):

Houda Chelaifa ◽

Manikandan Vinu ◽

Massar Dieng ◽

Youssef Idaghdour ◽

Ayesha Hasan ◽

...

Keyword(s):

Salt Stress ◽

Salt Tolerance ◽

Model Systems ◽

Biofuel Production ◽

Salt Tolerant ◽

Plant Model ◽

Tissue Specific ◽

Stress Regulation ◽

Salicornia Bigelovii ◽

Tolerant Plant

AbstractSoil salinity is an increasing threat to global food production systems. As such, there is a need for salt tolerant plant model systems in order to understand salt stress regulation and response. Salicornia bigelovii, a succulent obligatory halophyte, is one of the most salt tolerant plant species in the world. It possesses distinctive characteristics that make it a candidate plant model for studying salt stress regulation and tolerance, showing promise as an economical non-crop species that can be used for saline land remediation and for large-scale biofuel production. However, available S. bigelovii genomic and transcriptomic data are insufficient to reveal its molecular mechanism of salt tolerance. We performed transcriptome analysis of S. bigelovii flowers, roots, seeds and shoots tissues cultivated under desert conditions and irrigated with saline aquaculture effluent. We identified a unique set of tissue specific transcripts present in this non-model crop. A total of 66,943 transcripts (72.63%) were successfully annotated through the GO database with 18,321 transcripts (27.38%) having no matches to known transcripts. Excluding non-plant transcripts, differential expression analysis of 49,914 annotated transcripts revealed differentially expressed transcripts (DETs) between the four tissues and identified shoots and flowers as the most transcriptionally similar tissues relative to roots and seeds. The DETs between above and below ground tissues, with the exclusion of seeds, were primarily involved in osmotic regulation and ion transportation. We identified DETs between shoots and roots implicated in salt tolerance including SbSOS1, SbNHX, SbHKT6 upregulated in shoots relative to roots, while aquaporins (AQPs) were up regulated in roots. We also noted that DETs implicated in osmolyte regulation exhibit a different profile among shoots and roots. Our study provides the first report of a highly upregulated HKT6 from S. bigelovii shoot tissue. Furthermore, we identified two BADH transcripts with divergent sequence and tissue specific expression pattern. Overall, expression of the ion transport transcripts suggests Na+ accumulation in S. bigelovii shoots. Our data led to novel insights into transcriptional regulation across the four tissues and identified a core set of salt stress-related transcripts in S. bigelovii.

Download Full-text

Molecular response of canola to salt stress: insights on tolerance mechanisms

10.7287/peerj.preprints.26716 ◽

2018 ◽

Author(s):

Reza Shokri-Gharelo ◽

Pouya Motie-Noparvar

Keyword(s):

Salt Stress ◽

Salt Tolerance ◽

Edible Oils ◽

Biodiesel Fuel ◽

Molecular Response ◽

Salt Tolerant ◽

Tolerance Mechanisms ◽

Brassica Napus L ◽

Salt Response ◽

The Many

Canola (Brassica napus L.) is widely cultivated around the world for the production of edible oils and biodiesel fuel. Despite many canola varieties being described as ‘salt-tolerant’, plant yield and growth decline drastically with increasing salinity. Although many studies have resulted in better understanding of the many important salt-response mechanisms that control salt signaling in plants, detoxification of ions, and synthesis of protective metabolites, the engineering of salt-tolerant crops has only progressed slowly. Genetic engineering has been considered as an efficient method for improving the salt tolerance of canola but there are many unknown or little-known aspects regarding canola response to salinity stress at the cellular and molecular level. In order to develop highly salt-tolerant canola, it is essential to improve knowledge of the salt-tolerance mechanisms, especially the key components of the plant salt-response network. In this review, we focus on studies of the molecular response of canola to salinity to unravel the different pieces of the salt response puzzle. The paper includes a comprehensive review of the latest studies, particularly of proteomic and transcriptomic analysis, including the most recently identified canola tolerance components under salt stress, and suggests where researchers should focus future studies.

Download Full-text

Thymol improves salinity tolerance of tobacco by increasing the Na+ efflux and enhancing the content of NO and GSH

10.21203/rs.3.rs-745750/v2 ◽

2021 ◽

Author(s):

liang xu ◽

Jia-Qian Song ◽

yuelin wang ◽

Xiao-Han Liu ◽

Xue-Li Li ◽

...

Keyword(s):

Salt Stress ◽

Salt Tolerance ◽

Root Growth ◽

Abiotic Stresses ◽

Nature Medicine ◽

Oxygen Species ◽

Plant Tolerance ◽

Ros Accumulation ◽

Na Efflux ◽

The Stability

Abstract Plants have evolved a lot of strategies to improve salt tolerance to cope with salt stress. Recent studies have suggested that thymol (a nature medicine) enhances the plant tolerance against abiotic stresses, but the mechanisms are rarely known. Here, we found that thymol played an important role in maintaining root growth under salt stress. Thymol rescued root growth from salt stress via ameliorating ROS (reactive oxygen species) accumulation, lipid peroxidation, and cell death. In addition, thymol enhanced the level of NO (nitric oxide) and GSH (glutathione) to repress ROS accumulation, further protecting the stability of cell membrane. Thymol-induced Na+ efflux in roots and leaves under salt stress may depend on the upregulation of SOS1, HKT1 and NHX1. Consequently, all of these evidences suggested that thymol improved tobacco salt tolerance via enhancing NO and GSH content as well as inducing Na+ efflux.

Download Full-text

Trichoderma Enhances Net Photosynthesis, Water Use Efficiency, and Growth of Wheat (Triticum aestivum L.) under Salt Stress

Microorganisms ◽

10.3390/microorganisms8101565 ◽

2020 ◽

Vol 8 (10) ◽

pp. 1565 ◽

Cited By ~ 1

Author(s):

Abraham Mulu Oljira ◽

Tabassum Hussain ◽

Tatoba R. Waghmode ◽

Huicheng Zhao ◽

Hongyong Sun ◽

...

Keyword(s):

Salt Stress ◽

Salt Tolerance ◽

Water Use Efficiency ◽

Water Use ◽

Net Photosynthesis ◽

Photosynthetic Parameters ◽

Wheat Cultivars ◽

Salt Tolerant ◽

Use Efficiency ◽

Trichoderma Isolates

Soil salinity is one of the most important abiotic stresses limiting plant growth and productivity. The breeding of salt-tolerant wheat cultivars has substantially relieved the adverse effects of salt stress. Complementing these cultivars with growth-promoting microbes has the potential to stimulate and further enhance their salt tolerance. In this study, two fungal isolates, Th4 and Th6, and one bacterial isolate, C7, were isolated. The phylogenetic analyses suggested that these isolates were closely related to Trichoderma yunnanense, Trichoderma afroharzianum, and Bacillus licheniformis, respectively. These isolates produced indole-3-acetic acid (IAA) under salt stress (200 mM). The abilities of these isolates to enhance salt tolerance were investigated by seed coatings on salt-sensitive and salt-tolerant wheat cultivars. Salt stress (S), cultivar (C), and microbial treatment (M) significantly affected water use efficiency. The interaction effect of M x S significantly correlated with all photosynthetic parameters investigated. Treatments with Trichoderma isolates enhanced net photosynthesis, water use efficiency and biomass production. Principal component analysis revealed that the influences of microbial isolates on the photosynthetic parameters of the different wheat cultivars differed substantially. This study illustrated that Trichoderma isolates enhance the growth of wheat under salt stress and demonstrated the potential of using these isolates as plant biostimulants.

Download Full-text