scholarly journals The early diversification of ray-finned fishes (Actinopterygii): hypotheses, challenges and future prospects

2021 ◽  
Author(s):  
Struan Henderson ◽  
Emma Dunne ◽  
Sam Giles

Actinopterygii are the most speciose living vertebrate clade, and study of fossil members during their Palaeozoic rise to dominance has a long history of descriptive work. Although research interest into Palaeozoic actinopterygians has increased in recent years, broader patterns of diversity and diversity dynamics remain critically understudied. Past studies have investigated macroevolutionary trends in Palaeozoic actinopterygians in a piecemeal fashion, variably using existing compendia of vertebrates or literature-based searches, and there is no comprehensive occurrence-based dataset of actinopterygians spanning the whole of the Palaeozoic. Past studies typically show low levels of diversity in the Devonian with a substantial rise in the early Carboniferous in the aftermath of the end-Devonian mass extinction. However there are unresolved patterns reported for the later Carboniferous and Permian. In large part, these conflicts span from a lack of publicly-available occurrence data: actinopterygians are majorly underrepresented in the Paleobiology Database (PBDB), for example, obscuring patterns of diversity through time. This is exacerbated by major taxonomic problems pervading the Palaeozoic actinopterygian record. Innumerable taxa are lumped into wide-ranging families and poorly-formulated genera, with a vast number of described species concentrated in several particularly problematic ‘waste-basket’ genera. This taxonomic confusion feeds into a limited understanding of phylogenetic relationships. There is also a heavy sampling bias towards Europe and North America, with other regions underrepresented despite yielding important occurrences. Scrutiny of the extent to which spatial biases influence the record is lacking, as is research on other forms of bias. Low richness in some time periods may be linked to geological biases, while the effect of taphonomic biases on Palaeozoic actinopterygians have not yet been investigated. Efforts are already underway to both redescribe poorly defined taxa and describe taxa from underrepresented regions, helping address taxonomic issues and accuracy of occurrence data. New methods of sampling standardisation utilising up-to-date occurrence databases will be critical in teasing apart biological changes in diversity from those resulting from bias. Lastly, continued phylogenetic work will enable the use of phylogenetic comparative methods to elucidate the origins of actinopterygian biogeography and subsequent patterns of radiation throughout their rise to dominate aquatic faunas.

1997 ◽  
Vol 161 ◽  
pp. 419-429 ◽  
Author(s):  
Antonio Lazcano

AbstractDifferent current ideas on the origin of life are critically examined. Comparison of the now fashionable FeS/H2S pyrite-based autotrophic theory of the origin of life with the heterotrophic viewpoint suggest that the later is still the most fertile explanation for the emergence of life. However, the theory of chemical evolution and heterotrophic origins of life requires major updating, which should include the abandonment of the idea that the appearance of life was a slow process involving billions of years. Stability of organic compounds and the genetics of bacteria suggest that the origin and early diversification of life took place in a time period of the order of 10 million years. Current evidence suggest that the abiotic synthesis of organic compounds may be a widespread phenomenon in the Galaxy and may have a deterministic nature. However, the history of the biosphere does not exhibits any obvious trend towards greater complexity or «higher» forms of life. Therefore, the role of contingency in biological evolution should not be understimated in the discussions of the possibilities of life in the Universe.


Author(s):  
Donald Eugene Canfield

This chapter considers the aftermath of the great oxidation event (GOE). It suggests that there was a substantial rise in oxygen defining the GOE, which may, in turn have led to the Lomagundi isotope excursion, which was associated with high rates of organic matter burial and perhaps even higher concentrations of oxygen. This excursion was soon followed by a crash in oxygen to very low levels and a return to banded iron formation deposition. When the massive amounts of organic carbon buried during the excursion were brought into the weathering environment, they would have represented a huge oxygen sink, drawing down levels of atmospheric oxygen. There appeared to be a veritable seesaw in oxygen concentrations, apparently triggered initially by the GOE. The GOE did not produce enough oxygen to oxygenate the oceans. Dissolved iron was removed from the oceans not by reaction with oxygen but rather by reaction with sulfide. Thus, the deep oceans remained anoxic and became rich in sulfide, instead of becoming well oxygenated.


Genetics ◽  
2003 ◽  
Vol 163 (1) ◽  
pp. 147-157 ◽  
Author(s):  
Arjun Sivasundar ◽  
Jody Hey

AbstractCaenorhabditis elegans has become one of the most widely used model research organisms, yet we have little information on evolutionary processes and recent evolutionary history of this widespread species. We examined patterns of variation at 20 microsatellite loci in a sample of 23 natural isolates of C. elegans from various parts of the world. One-half of the loci were monomorphic among all strains, and overall genetic variation at microsatellite loci was low, relative to most other species. Some population structure was detected, but there was no association between the genetic and geographic distances among different natural isolates. Thus, despite the nearly worldwide occurrence of C. elegans, little evidence was found for local adaptation in strains derived from different parts of the world. The low levels of genetic variation within and among populations suggest that recent colonization and population expansion might have occurred. However, the patterns of variation are not consistent with population expansion. A possible explanation for the observed patterns is the action of background selection to reduce polymorphism, coupled with ongoing gene flow among populations worldwide.


Author(s):  
Mariela C. Castro ◽  
Murilo J. Dahur ◽  
Gabriel S. Ferreira

AbstractDidelphidae is the largest New World radiation of marsupials, and is mostly represented by arboreal, small- to medium-sized taxa that inhabit tropical and/or subtropical forests. The group originated and remained isolated in South America for millions of years, until the formation of the Isthmus of Panama. In this study, we present the first reconstruction of the biogeographic history of Didelphidae including all major clades, based on parametric models and stratified analyses over time. We also compiled all the pre-Quaternary fossil records of the group, and contrasted these data to our biogeographic inferences, as well as to major environmental events that occurred in the South American Cenozoic. Our results indicate the relevance of Amazonia in the early diversification of Didelphidae, including the divergence of the major clades traditionally ranked as subfamilies and tribes. Cladogeneses in other areas started in the late Miocene, an interval of intense shifts, especially in the northern portion of Andes and Amazon Basin. Occupation of other areas continued through the Pliocene, but few were only colonized in Quaternary times. The comparison between the biogeographic inference and the fossil records highlights some further steps towards better understanding the spatiotemporal evolution of the clade. Finally, our results stress that the early history of didelphids is obscured by the lack of Paleogene fossils, which are still to be unearthed from low-latitude deposits of South America.


Viruses ◽  
2021 ◽  
Vol 13 (4) ◽  
pp. 585
Author(s):  
Rebecca M. Grimwood ◽  
Edward C. Holmes ◽  
Jemma L. Geoghegan

Rubella virus (RuV) is the causative agent of rubella (“German measles”) and remains a global health concern. Until recently, RuV was the only known member of the genus Rubivirus and the only virus species classified within the Matonaviridae family of positive-sense RNA viruses. Recently, two new rubella-like matonaviruses, Rustrela virus and Ruhugu virus, have been identified in several mammalian species, along with more divergent viruses in fish and reptiles. To screen for the presence of additional novel rubella-like viruses, we mined published transcriptome data using genome sequences from Rubella, Rustrela, and Ruhugu viruses as baits. From this, we identified a novel rubella-like virus in a transcriptome of Tetronarce californica—order Torpediniformes (Pacific electric ray)—that is more closely related to mammalian Rustrela virus than to the divergent fish matonavirus and indicative of a complex pattern of cross-species virus transmission. Analysis of host reads confirmed that the sample analysed was indeed from a Pacific electric ray, and two other viruses identified in this animal, from the Arenaviridae and Reoviridae, grouped with other fish viruses. These findings indicate that the evolutionary history of the Matonaviridae is more complex than previously thought and highlights the vast number of viruses that remain undiscovered.


1983 ◽  
Vol 120 (1) ◽  
pp. 51-58 ◽  
Author(s):  
A. J. Boucot ◽  
C. H. C. Brunton ◽  
J. N. Theron

SummaryThe Devonian brachiopod Tropidoleptus is recognized for the first time in South Africa. It is present in the lower part of the Witteberg Group at four widely separated localities. Data regarding the stratigraphical range of the genus elsewhere, combined with information on recently described fossil plants and vertebrates from underlying strata of the upper Bokkeveld Group, suggest that a Frasnian or even Givetian age is reasonable for the lower part of the Witteberg Group. The recognition of Tropidoleptus in a shallow water, near-shore, molluscan association, at the top of the South African marine Devonian sequence, is similar to its occurrence in Bolivia, and suggests a common Malvinokaffric Realm history of shallowing, prior to later Devonian or early Carboniferous non-marine sedimentation. It is noteworthy that Tropidoleptus is now known to occur in ecologically suitable environments around the Atlantic, but is absent from these same environments in Asia and Australia. Tropidoleptus is an excellent example of dispersal in geological time — first appearing in northern Europe and Nova Scotia, then elsewhere in eastern North America and North Africa, followed by South America and South Africa, while continuing in North America.


Author(s):  
Paweł Bukowski ◽  
Filip Novokmet

AbstractWe construct the first consistent series on the long-term distribution of income in Poland by combining tax, household survey and national accounts data. We document a U-shaped evolution of inequalities from the end of the nineteenth century until today: (1) inequality was high before WWII; (2) abruptly fell after the introduction of communism in 1947 and stagnated at low levels during the whole communist period; (3) experienced a sharp rise with the return to capitalism in 1989. We find that official survey-based measures strongly under-estimate the rise in inequality since 1989. Our results highlight the prominent role of capital income in driving the U-shaped evolution of top income shares. The unique inequality history of Poland speaks to the central role of institutions and policies in shaping inequality in the long run.


PEDIATRICS ◽  
1950 ◽  
Vol 5 (1) ◽  
pp. 57-67
Author(s):  
T. S. DANOWSKI ◽  
A. C. AUSTIN ◽  
R. C. GOW ◽  
F. M. MATEER ◽  
F. A. WEIGAND ◽  
...  

Abnormally low levels of serum potassium were observed prior to or during therapy of infants with a history of prolonged or recurrent vomiting. Balance studies indicate that either dilution of body fluids with low potassium solution, or transfers of potassium into cells, or both processes were responsible for the hypokalemia. The probable existence of deficits of body potassium incurred prior to the balance studies and their therapeutic implications have been discussed.


2001 ◽  
Vol 75 (6) ◽  
pp. 1202-1213 ◽  
Author(s):  
Robert L. Carroll

The origin of tetrapods from sarcopterygian fish in the Late Devonian is one of the best known major transitions in the history of vertebrates. Unfortunately, extensive gaps in the fossil record of the Lower Carboniferous and Triassic make it very difficult to establish the nature of relationships among Paleozoic tetrapods, or their specific affinities with modern amphibians. The major lineages of Paleozoic labyrinthodonts and lepospondyls are not adequately known until after a 20–30 m.y. gap in the Early Carboniferous fossil record, by which time they were highly divergent in anatomy, ways of life, and patterns of development. An even wider temporal and morphological gap separates modern amphibians from any plausible Permo-Carboniferous ancestors. The oldest known caecilian shows numerous synapomorphies with the lepospondyl microsaur Rhynchonkos. Adult anatomy and patterns of development in frogs and salamanders support their origin from different families of dissorophoid labyrinthodonts. The ancestry of amniotes apparently lies among very early anthracosaurs.


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