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2022 ◽  
Vol 2022 ◽  
pp. 1-14
Author(s):  
Palayakotai R. Raghavan

Increasing outbreaks of new pathogenic viruses have promoted the exploration of novel alternatives to time-consuming vaccines. Thus, it is necessary to develop a universal approach to halt the spread of new and unknown viruses as they are discovered. One such promising approach is to target lipid membranes, which are common to all viruses and bacteria. The ongoing severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) pandemic has reaffirmed the importance of interactions between the virus envelope and the host cell plasma membrane as a critical mechanism of infection. Metadichol®, a nanolipid emulsion of long-chain alcohols, has been demonstrated as a strong candidate that inhibits the proliferation of SARS-CoV-2. Naturally derived substances, such as long-chain saturated lipid alcohols, reduce viral infectivity, including that of coronaviruses (such as SARS-CoV-2) by modifying their lipid-dependent attachment mechanism to human host cells. The receptor ACE2 mediates the entry of SARS-CoV-2 into the host cells, whereas the serine protease TMPRSS2 primes the viral S protein. In this study, Metadichol® was found to be 270 times more potent an inhibitor of TMPRSS2 ( E C 50 = 96   ng / mL ) than camostat mesylate ( E C 50 = 26000   ng / mL ). Additionally, it inhibits ACE with an EC50 of 71 ng/mL, but it is a very weak inhibitor of ACE2 at an EC50 of 31 μg/mL. Furthermore, the live viral assay performed in Caco-2 cells revealed that Metadichol® inhibits SARS-CoV-2 replication at an EC90 of 0.16 μg/mL. Moreover, Metadichol® had an EC90 of 0.00037 μM, making it 2081 and 3371 times more potent than remdesivir ( E C 50 = 0.77   μ M ) and chloroquine ( E C 50 = 1.14   μ M ), respectively.


Water ◽  
2022 ◽  
Vol 14 (2) ◽  
pp. 169
Author(s):  
Kaytee L. Pokrzywinski ◽  
West M. Bishop ◽  
Christopher R. Grasso ◽  
Brianna M. Fernando ◽  
Benjamen P. Sperry ◽  
...  

A 72 h small-scale trial was conducted in enclosed mesocosms in the Lake Okeechobee waterway to evaluate the effectiveness of a USEPA-registered peroxide-based algaecide (formulated as sodium carbonate peroxyhydrate) for controlling a natural cyanobacteria population. Mesocosms were initially subjected to either no algaecide or the maximum label rate of 10 mg H2O2·L−1. A subset of mesocosms were then subjected to a sequential application of 5 mg H2O2·L−1 at 48 h after initial treatment. Following application, peroxide concentrations rapidly decreased and were undetectable by 48 h. At 24 h after treatment, significant decreases in all biomass indicators were observed (compared to untreated mesocosms), including extracted chlorophyll a, microscopic counts (total phytoplankton and total cyanobacteria), and cyanobacteria-specific 16S rRNA gene copies by over 71%. Although peroxide treatment reduced cyanobacteria biomass, there was no change in overall community structure and the remaining population was still dominated by cyanobacteria (>90%). After 48 h exposure, some biomass recovered in single application mesocosms resulting in only a 32–45% reduction in biomass. Repeated peroxide dosing resulted in the greatest efficacy, which had a sustained (60–91%) decrease in all biomass indicators for the entire study. While a single application of the peroxide was effective in the first 24 h, a sequential treatment is likely necessary to sustain efficacy when using this approach to manage cyanobacteria in the field. Results of this study support that this peroxide-based algaecide is a strong candidate to continue with scalable field trials to assess its potential future utility for operational management programs in the Lake Okeechobee waterway.


2021 ◽  
Author(s):  
Chase P Kelley ◽  
Maja C Haerle ◽  
Eric T Wang

Cas13 is a unique family of CRISPR endonucleases exhibiting programmable binding and cleavage of RNAs and is a strong candidate for eukaryotic RNA knockdown in the laboratory and the clinic. However, sequence-specific binding of Cas13 to the target RNA unleashes non-specific bystander RNA cleavage, or collateral activity, which may confound knockdown experiments and raises concerns for therapeutic applications. Although conserved across orthologs and robust in cell-free and bacterial environments, the extent of collateral activity in mammalian cells remains disputed. Here, we investigate Cas13d collateral activity in the context of an RNA-targeting therapy for myotonic dystrophy type 1, a disease caused by a transcribed long CTG repeat expansion. We find that when targeting CUGn RNA in HeLa and other cell lines, Cas13d depletes endogenous and transgenic RNAs, interferes with critical cellular processes, and activates stress response and apoptosis pathways. We also observe collateral effects when targeting other repetitive and unique transgenic sequences, and we provide evidence for collateral activity when targeting highly expressed endogenous transcripts. To minimize collateral activity for repeat-targeting Cas13d therapeutics, we introduce gRNA excision for negative-autoregulatory optimization (GENO), a simple strategy that leverages crRNA processing to control Cas13d expression and is easily integrated into an AAV gene therapy. We argue that thorough assessment of collateral activity is necessary when applying Cas13d in mammalian cells and that implementation of GENO illustrates the advantages of compact and universally robust regulatory systems for Cas-based gene therapies. 


Crystals ◽  
2021 ◽  
Vol 11 (12) ◽  
pp. 1592
Author(s):  
Mohammad Aljarrah ◽  
Jasim Alnahas ◽  
Mohammed Alhartomi

Magnesium alloys are a strong candidate for various applications in automobile and aerospace industries due to their low density and specific strength. Micro-alloying magnesium with zinc, yttrium, and cerium enhances mechanical properties of magnesium through grain refinement and precipitation hardening. In this work, a critical review of magnesium-based binary systems including Mg-Zn, Mg-Y, Mg-Ce, Zn-Y, and Zn-Ce is presented. Based on the CALPHAD approach and first-principles calculations, thermodynamic modeling of Mg-Zn-Y and Mg-Zn-Ce ternary phase diagrams have been summarized. The influence of micro-alloying (yttrium and cerium) on the mechanical properties of magnesium is discussed. A comparison between mechanical properties of magnesium commercial alloys and magnesium–zinc–{yttrium and cerium} have been summarized in tables.


2021 ◽  
Author(s):  
Rommel Andrew Santos ◽  
Rodrigo Del Rio ◽  
Alexander Delfin Alvarez ◽  
Gabriela Romero ◽  
Brandon Zarate Vo ◽  
...  

Abstract Background The Xenopus retinotectal circuit is organized topographically, where the dorsal-ventral axis of the retina maps respectively on to the ventral-dorsal axis of the tectum; axons from the nasal-temporal axis of the retina project respectively to the caudal-rostral axis of the tectum. Studies throughout the last two decades have shown that mechanisms involving molecular recognition of proper termination domains are at work guiding topographic organization. Such studies have shown that graded distribution of molecular cues is important for topographic mapping. However, the molecular cues organizing topography along the developing optic nerve, and as retinal axons cross the chiasm and navigate towards their target in the tectum, remain unknown. Down syndrome cell adhesion molecule (DSCAM) has been characterized as a key molecule in axon guidance, making it a strong candidate involved in the topographic organization of retinal fibers along the optic path.Methods Using a combination of whole-brain clearing and immunohistochemistry staining techniques we characterized DSCAM expression and the projection of ventral and dorsal retinal fibers starting from the eye, followed to the optic nerve into the chiasm, and into the terminal target in the optic tectum in Xenopus laevis tadpoles. We also assessed the effects of DSCAM on the establishment of retinotopic maps through spatially and temporally targeted DSCAM knockdown on retinal ganglion cells (RGCs) with axons innervating the optic tectum. Results Highest expression of DSCAM was localized to the ventral posterior region of the optic nerve and chiasm; this expression pattern coincides with ventral fibers derived from ventral RGCs. Downregulating DSCAM levels affected the segregation and proper sorting of medial axon fibers, derived from ventral RGCs, within the tectal neuropil, indicating that DSCAM plays a role in retinotopic organization. ConclusionThese findings together with the observation that DSCAM immunoreactivity accumulates on the primary dendrites of tectal neurons indicates that DSCAM exerts multiple roles in coordinating retinotopic order and connectivity in the developing vertebrate visual system.


Author(s):  
Koichiro Okamoto ◽  
Takahisa Tanaka ◽  
Makoto Miyamura ◽  
Hiroki Ishikuro ◽  
Ken Uchida ◽  
...  

Abstract A nonvolatile resistive switching of NanoBridgeTM (NB) at 4 K has been demonstrated for realizing the quantum-classical interface (QCI), in which the challenging of reset operation at cryogenic temperature is successfully achieved. The set voltage of the NB is increased with decreasing temperature, saturated around 150 K and to be 2.55 V at 4 K. The on-state resistances tuned at 1k-5kΩ show small temperature dependence down to 4 K due to high residual resistivity. The increased reset current of the NB at 4 K is compensated by the process optimization with thermal engineering and the increased Idsat of the select transistor at 4 K, resulting in the stable switching. The low-power QCI featuring NBs is a strong candidate for controlling a large number of qubits at cryogenic temperature.


Author(s):  
Ana Coto-Montes ◽  
Laura González-Blanco ◽  
Eduardo Antuña ◽  
Iván Menéndez-Valle ◽  
Juan Carlos Bermejo-Millo ◽  
...  

Biomarkers are essential tools for accurate diagnosis and effective prevention, but their validation is a pending challenge that limits their usefulness, even more so with constructs as complex as frailty. Sarcopenia shares multiple mechanisms with frailty which makes it a strong candidate to provide robust frailty biomarkers. Based on this premise, we studied the temporal evolution of cellular interactome in frailty, from independent patients to dependent ones. Overweight is a recognized cause of frailty in aging, so we studied the altered mechanisms in overweight independent elderly and evaluated their aggravation in dependent elderly. This evidence of the evolution of previously altered mechanisms would significantly support their role as real biomarkers of frailty. The results showed a preponderant role of autophagy in interactome control at both different functional points, modulating other essential mechanisms in the cell, such as mitochondrial capacity or oxidative stress. Thus, the overweight provoked in the muscle of the elderly an overload of autophagy that kept cell survival in apparently healthy individuals. This excessive and permanent autophagic effort did not seem to be able to be maintained over time. Indeed, in dependent elderly, the muscle showed a total autophagic inactivity, with devastating effects on the survival of the cell, which showed clear signs of apoptosis, and reduced functional capacity. The frail elderly are in a situation of weakness that is a precursor of dependence that can still be prevented if detection is early. Hence biomarkers are essential in this context.


BMC Genomics ◽  
2021 ◽  
Vol 22 (1) ◽  
Author(s):  
Martha I. Natukunda ◽  
Jessica D. Hohenstein ◽  
Chantal E. McCabe ◽  
Michelle A. Graham ◽  
Yunhui Qi ◽  
...  

Abstract Background Pyramiding different resistance genes into one plant genotype confers enhanced resistance at the phenotypic level, but the molecular mechanisms underlying this effect are not well-understood. In soybean, aphid resistance is conferred by Rag genes. We compared the transcriptional response of four soybean genotypes to aphid feeding to assess how the combination of Rag genes enhanced the soybean resistance to aphid infestation. Results A strong synergistic interaction between Rag1 and Rag2, defined as genes differentially expressed only in the pyramid genotype, was identified. This synergistic effect in the Rag1/2 phenotype was very evident early (6 h after infestation) and involved unique biological processes. However, the response of susceptible and resistant genotypes had a large overlap 12 h after aphid infestation. Transcription factor (TF) analyses identified a network of interacting TF that potentially integrates signaling from Rag1 and Rag2 to produce the unique Rag1/2 response. Pyramiding resulted in rapid induction of phytochemicals production and deposition of lignin to strengthen the secondary cell wall, while repressing photosynthesis. We also identified Glyma.07G063700 as a novel, strong candidate for the Rag1 gene. Conclusions The synergistic interaction between Rag1 and Rag2 in the Rag1/2 genotype can explain its enhanced resistance phenotype. Understanding molecular mechanisms that support enhanced resistance in pyramid genotypes could facilitate more directed approaches for crop improvement.


2021 ◽  
Vol 13 ◽  
Author(s):  
Tara L. Moore ◽  
Damon A. Young ◽  
Ronald J. Killiany ◽  
Kari R. Fonseca ◽  
Dmitri Volfson ◽  
...  

Aged-related declines in cognition, especially working memory and executive function, begin in middle-age and these abilities are known to be mediated by the prefrontal cortex (PFC) and more specifically the dopamine (DA) system within the PFC. In both humans and monkeys, there is significant evidence that the PFC is the first cortical region to change with age and the PFC appears to be particularly vulnerable to age-related loss of dopamine (DA). Therefore, the DA system is a strong candidate for therapeutic intervention to slow or reverse age related declines in cognition. In the present study, we administered a novel selective, potent, non-catechol DA D1 R agonist PF-6294 (Pfizer, Inc.) to aged female rhesus monkeys and assessed their performance on two benchmark tasks of working memory – the Delayed Non-match to Sample Task (DNMS) and Delayed Recognition Span Task (DRST). The DNMS task was administered first with the standard 10 s delay and then with 5 min delays, with and without distractors. The DRST was administered each day with four trials with unique sequences and one trial of a repeated sequence to assess evidence learning and retention. Overall, there was no significant effect of drug on performance on any aspect of the DNMS task. In contrast, we demonstrated that a middle range dose of PF-6294 significantly increased memory span on the DRST on the first and last days of testing and by the last day of testing the increased memory span was driven by the performance on the repeated trials.


Author(s):  
Takuma NANJO ◽  
takashi Imazawa ◽  
Akira Kiyoi ◽  
Tetsuro Hayashida ◽  
Tatsuro WATAHIKI ◽  
...  

Abstract An extrinsic electron induced by a dielectric (EID) AlGaN/GaN MOS high-electron-mobility transistor (HEMT) on Si substrate was designed and investigated. The EID structure with SiO2 deposition and subsequent high-temperature annealing, which induces two-dimensional electron gases (2DEGs) on fully depleted AlGaN/GaN hetero-epitaxial layers with thin AlGaN barrier layer, was applied to access and drift regions in the HEMT. The fabricated HEMT exhibited enhancement-mode operation with a specific on-resistance of 7.6 mΩcm2 and a breakdown voltage of over 1 kV. In addition, electron state analysis using hard X-ray photoelectron spectroscopy revealed that changes in the chemical states of Al and energy level lowering at the SiO2/AlGaN interface affect the induction of 2DEG in the EID structure. The proposed HEMTs should become a strong candidate for highly reliable high-power switching devices due to the damage-less fabrication without dry etching or fluorine plasma exposure processes on the semiconductor layers.


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