CASP microdomain formation requires cross cell wall stabilization of domains and non-cell autonomous action of LOTR1

Efficient uptake of nutrients in both animal and plant cells requires tissue-spanning diffusion barriers separating inner tissues from the outer lumen/soil. However, we poorly understand how such contiguous three-dimensional superstructures are formed in plants. Here, we show that correct establishment of the plant Casparian Strip (CS) network relies on local neighbor communication. We show that positioning of Casparian Strip membrane domains (CSDs) is tightly coordinated between neighbors in wild-type and that restriction of domain formation involves the putative extracellular protease LOTR1. Impaired domain restriction in lotr1 leads to fully functional CSDs at ectopic positions, forming 'half strips'. LOTR1 action in the endodermis requires its expression in the stele. LOTR1 endodermal expression cannot complement, while cortex expression causes a dominant-negative phenotype. Our findings establish LOTR1 as a crucial player in CSD positioning acting in a directional, non-cell-autonomous manner to restrict and coordinate CS positioning.

Kireçli Toprakta Börülcenin Fide Gelişimi Üzerine Vermikompost ve Mikoriza Uygulamalarının Etkileri

Organic matter has a positive effect on the uptake of nutrients in the soil. The increase in mycorrhizal activities in the soil causes an increase in the activities in the rhizosphere region. Vermicompost is among the most useful organic fertilizers that can be added to the soil in recent years. Soil microflora is capable of realizing the return of mineral substances. Akkız cowpea variety was used in the study: The experiment was carried out as a viol study with 3 replications according to the randomized blocks trial design. In the study, seedling development was achieved by mixing vermicompost (0, 15, 30 and 45%) with and without mycorrhiza in a soil containing 16% lime into the viols in order to develop seedlings. Sufficient minerals have been applied to the plants for their growth. Seedlings were harvested when they were 40 days old, and seedling measurement parameters and macronutrients in plant leaves were checked. As the amount of vermicompost increased, it caused an increase in the above-ground fresh and dry weights, root fresh and root dry weights of the seedlings. As the organic fertilizer mixture increased, the nitrogen, phosphorus, potassium and magnesium concentrations of the plant leaves increased. The addition of mycorrhiza to the rearing medium has led to different results in the investigated characteristics. Addition of increasing organic fertilizer ratios in the study, Organic fertilizer and bacteria application of cowpea cultivars were effective in increasing the development of plants in calcareous soils.

Turnover in life strategies recapitulates microbial succession on synthetic marine particles

Particulate organic matter (POM) in the ocean sustains diverse communities of bacteria that mediate the remineralization of organic complex matter. However, the variability of these particles and of the environmental conditions surrounding them present a challenge to the study of the ecological processes shaping particle-associated communities and their function. In this work, we utilise data from experiments in which coastal water communities were grown on synthetic particles to ask which are the most important ecological drivers of their assembly and associated traits. Combining 16S rRNA amplicon sequencing with shotgun metagenomics, together with an analysis of the full genomes of a subset of isolated strains, we were able to identify two-to-three distinct community classes, corresponding to early vs. late colonizers. We show that these classes are shaped by environmental selection (early colonizers) and facilitation (late colonizers), and find distinctive traits associated with each class. While early colonizers have a larger proportion of genes related to uptake of nutrients, motility and environmental sensing with few pathways enriched for metabolism, late colonizers devote a higher proportion of genes for metabolism, comprising a wide array of different pathways including metabolism of carbohydrates, amino acids and xenobiotics We find evidence in selected metabolic pathways for the existence of a trophic-chain topology connecting both classes. The interpretation of these traits suggests a distinction between early and late colonizers analogous to other classifications found in the literature, and we discuss connections with the classical distinction between r- and K-strategists.

Biofortification of Cereals and Pulses Using New Breeding Techniques: Current and Future Perspectives

Cereals and pulses are consumed as a staple food in low-income countries for the fulfillment of daily dietary requirements and as a source of micronutrients. However, they are failing to offer balanced nutrition due to deficiencies of some essential compounds, macronutrients, and micronutrients, i.e., cereals are deficient in iron, zinc, some essential amino acids, and quality proteins. Meanwhile, the pulses are rich in anti-nutrient compounds that restrict the bioavailability of micronutrients. As a result, the population is suffering from malnutrition and resultantly different diseases, i.e., anemia, beriberi, pellagra, night blindness, rickets, and scurvy are common in the society. These facts highlight the need for the biofortification of cereals and pulses for the provision of balanced diets to masses and reduction of malnutrition. Biofortification of crops may be achieved through conventional approaches or new breeding techniques (NBTs). Conventional approaches for biofortification cover mineral fertilization through foliar or soil application, microbe-mediated enhanced uptake of nutrients, and conventional crossing of plants to obtain the desired combination of genes for balanced nutrient uptake and bioavailability. Whereas, NBTs rely on gene silencing, gene editing, overexpression, and gene transfer from other species for the acquisition of balanced nutritional profiles in mutant plants. Thus, we have highlighted the significance of conventional and NBTs for the biofortification of cereals and pulses. Current and future perspectives and opportunities are also discussed. Further, the regulatory aspects of newly developed biofortified transgenic and/or non-transgenic crop varieties via NBTs are also presented.

Agronomic bio-fortification of iron, zinc and selenium enhance growth, quality and uptake of different sorghum accessions

Agronomic bio-fortification is one of the main approaches for mitigation of micronutrient shortage in human populations and endorses sustainable production of food and feed. Studies related to agronomic bio-fortification of crops are mainly focused on single or rarely two micronutrients application, and no attempt has made to study the combined effect of zinc (Zn), iron (Fe) and selenium (Se) on forage sorghum. Therefore, this research was accomplished to evaluate the effect of Zn, Fe and Se bio-fortification on diverse sorghum accessions. The field experiments were conducted in a randomised complete block design with a split-plot arrangement. The treatments comprised of Zn (10 mg/L as ZnSO₄∙5H₂O), Fe (7 mg/L as FeSO₄∙7H₂O), Se (3 mg/L as SeSO₄) and CK (control) were applied to five sorghum accessions: G₁ (Y-16), G₂ (YSH-166), G₃ (YSH-134), G₄ (YSS-98) and G₅ (YSH-132). According to our results, the sorghum accession G₅ showed superiority over all other accessions and produced maximum values of all growth and quality traits except grains number per panicle and 1 000-grain weight. All applied micronutrients (Zn, Fe and Se) enhanced the growth, quality and uptake of nutrients in sorghum accessions. However, Se recorded the highest plant height, stem diameter, 1 000-grain weight and Zn produced the maximum protein, oil and starch contents. Conclusively, it can be concluded that G₅ with Se must be used to achieve the optimum values of agronomic traits, while G₅ with Zn found more effective to improve the quality traits of sorghum.

Characterization of apicomplexan amino acid transporters (ApiATs) in the malaria parasite Plasmodium falciparum

ABSTRACTDuring the symptomatic human blood phase, malaria parasites replicate within red blood cells. Parasite proliferation relies on the uptake of nutrients, such as amino acids, from the host cell and the blood plasma, requiring transport across multiple membranes. Amino acids are delivered to the parasite through the parasite surrounding vacuolar compartment by specialized nutrient-permeable channels of the erythrocyte membrane and the parasitophorous vacuole membrane (PVM). However, further transport of amino acid across the parasite plasma membrane (PPM) is currently not well characterized. In this study, we focused on a family of Apicomplexan amino acid transporters (ApiATs) that comprises five members in Plasmodium falciparum. First, we localized four of the PfApiATs at the PPM using endogenous GFP-tagging. Next, we applied reverse genetic approaches to probe into their essentiality during asexual replication and gametocytogenesis. Upon inducible knockdown and targeted gene disruption a reduced asexual parasite proliferation was detected for PfApiAT2 and PfApiAT4. Functional inactivation of individual PfApiATs targeted in this study had no effect on gametocyte development. Our data suggest that individual PfApiATs are partially redundant during asexual in vitro proliferation and fully redundant during gametocytogenesis of P. falciparum parasites.IMPORTANCEMalaria parasites live and multiply inside cells. To facilitate their extremely fast intracellular proliferation they hijack and transform their host cells. This also requires the active uptake of nutrients, such as amino acids, from the host cell and the surrounding environment through various membranes that are the consequence of the parasite’s intracellular lifestyle. In this manuscript we focus on a family of putative amino acid transporters termed ApiAT. We show expression and localization of four transporters in the parasite plasma membrane of Plasmodium falciparum-infected erythrocytes that represent one interface of the pathogen to its host cell. We probed into the impact of functional inactivation of individual transporters on parasite growth in asexual and sexual blood stages of P. falciparum and reveal that only two of them show a modest but significant reduction in parasite proliferation but no impact on gametocytogenesis pointing towards redundancy within this transporter family.

Arbuscular Mycorrhizal Fungi Association with Some Selected Medicinal Plants

Arbuscular mycorrhizal fungi (AMF) are group of fungi of the order Glomales that form symbiotic association with plant roots and enhance the uptake of nutrients, and improve plant growth and yield. This study was conducted to investigate the occurrence of arbuscular mycorrhizal fungi in the rhizospheres of some commonly grown medicinal plants in Maiduguri viz; Aloe vera, Mentha, Cymbopogon citrates and Ocimum gratissimum. The results revealed all the plants have formed mycorrhiza symbiosis. Arbuscular mycorrhizal fungi spores from five genera (Glomus, Acaulospora, Dentiscutata, Scutellispora and Gigaspora were isolated and identified. Cymbopogon citrates significantly recorded the highest total AMF spore counts (90±4.17) while Aloe vera recorded the least (54±2.28). Amongst the five mycorrhiza genus Glomus species were comparatively higher under all plant species, while, Dentiscutata and Gigaspora had the lowest spore counts. Highest percent root colonization (72±4.23%) was recorded under Cymbopogon citrates and Aloe vera recorded the least (55.5 ±2.41%). The study confirmed mycorrhiza association with all the plants, however, AMF spore counts diversity varies with plant species. Arbuscular mycorrhizal fungi could be inoculated to soils with scanty or ineffective spores for enhanced plant nutrition and growth of medicinal plants.

Quantifying the Impact of Human Leukocyte Antigen on the Human Gut Microbiota

The microorganisms that live in the digestive tracts of humans, known as the gut microbiota, are essential for hosts’ survival, as they support crucial functions. For example, they support the host in facilitating the uptake of nutrients and give colonization resistance against pathogens.

Effect of Soil Degradation and Remediation in Technogenic Barrens on the Uptake of Nutrients and Heavy Metals by Plants in the Kola Subarctic

To assess the state of plants and their response to changes in soil properties, the elemental composition of leaves of widespread and pollution-tolerant species Betula pubescens Ehrh. and Salix caprea L. has been studied near the nonferrous metallurgy enterprises in the Kola Peninsula. The content of nutrients and heavy metals in the leaves of undergrowth on technogenic barrens and remediation sites differing in remediation technologies has been analyzed. According to the results of leaf diagnostics, both species under barren conditions are characterized by a noticeable deficiency of K, Ca, P, and, especially, Mn and Zn. The leaves of both species accumulate Ni, Cu, Co, As, Cr, Fe, Al, Pb, V, and S. Willow leaves contain more Cd, Co, Cr, Ni, Cu, Al, Fe, As, S, Ca, K and less Mn than birch leaves. Chemophytostabilization has little effect, and the covering of contaminated soils with a constructed fertile layer leads to the enrichment of birch and willow leaves with Ca, K, and P. Under conditions of continuing atmospheric emissions and gradual accumulation of bioavailable heavy metals in soils after the remediation, the accumulation of metals in leaves is largely determined by the distance from the pollution source, reflecting the possibility of both root and foliar uptake. The concentrations of Ni and Cu in leaves in 2018 did not decrease compared to 2011. The low, albeit varying, ratios of the contents of heavy metals in undergrowth leaves and in the soil and weak correlation of heavy metal contents in these media indicated that B. pubescens and S. caprea retain their ability to regulate their chemical composition even under extreme conditions of technogenic barrens. At the same time, supporting the protective capabilities of plants via optimizing mineral nutrition and soil acidity in combination with a reduction in atmospheric pollution is a prerequisite for efficient remediation of technogenic territories in the Far North.

REMOVAL OF NUTRIENTS AS INFLUENCED BY VARIED RATES OF RECOMMENDED NUTRIENTS IN CONJUNCTION WITH BIOFERTILIZERS IN LOCAL LANDRACES OF PADDY IN COASTAL AREA OF KARNATAKA, INDIA

The uptake of nutrients by the paddy crop better indicative of the fertility, productivity, and plant nutrient status. The main objective of this investigation was that the rate of nutrient application can influence the removal of nutrients into formsavailable to the soil with different landraces in conjunction with the application of different microbial inoculants under different fertility levels. The yield of landraces was significantly influenced by the microbial inoculants under different fertility levels.Significantly higher uptake of N, P and K was observed in the landrace padmarekha compared to other landraces. The nutrient removal from the soil was in the range of 81.57 – 104.08 kg N, 19.55 -33.96 kg P and 88.15 – 111.81 kg/ha Kamong landraces. Similarly, the higher uptake was seen with the application of 100 per centRDF along with the azospirullum, Bacillus megatherium var. Phosphoticum Frateuria quaratia,Thiobacillus thiooxidans and Vesicular ArbescularMycorrizae.The nutrient removal was in the range of 47.11-122.0 kg N, 10.71-36.7 kg P2O5 and 34.22- 141.21 kg/ha K2O among fertility levels in different paddy landraces used in the study. The different microbial inoculants application with the recommended dose of fertilizers in different levels helped in the acquisition of the nutrients from the soil solution illustrating the effects of microbial applications through the increased supply of biologically fixed nitrogen, mobilizing the phosphorus towards plant roots, and potassium availability to the crop. Thus, our investigations acclaim that there is a need to inoculate the crop with different microbial inoculants to increase the use and uptake of the nutrients by the crop and improvement in soil nutrient status.