scholarly journals Probable omnigenic effect and evolutionary insights of aerobic adaptation allele OsNCED2T on qDTY12.1 effecting grain yield under reproductive stage drought stress in rice

2021 ◽  
Author(s):  
C Parameswaran ◽  
B Cayalvizhi ◽  
S Sanghamitra ◽  
N Anandan ◽  
K Jawahar Lal ◽  
...  
Keyword(s):  
Drought Stress ◽  
Drought Tolerance ◽  
Grain Yield ◽  
Genomic Region ◽  
Favorable Allele ◽  
Severe Drought ◽  
Evolutionary Analysis ◽  
Synonymous Snps ◽  
Drought Tolerant ◽  
Genomic Regions

AbstractYield associated quantitative trait loci (qDTY) under drought stress provides significant advantage for grain yield in rice. The major, stable qDTY12.1 was identified in a mapping population developed from upland cultivars Vandana and Way Rarem. Further, introgression line comprising of qDTY12.1 genomic region was characterized to have multiple genes (NAM, DECUSSATE) regulating the drought tolerance under severe drought stress substantiated through recently proposed omnigenic model for complex traits. Recently, plastid localized NCED2T allele present within the qDTY12.1 genomic region was characterized for conferring aerobic adaptation in lowland varieties. Since, NCED2T is evolutionary fixed in upland cultivars and Vandana was found to have the favorable allele of NCED2T, we hypothesized that this favorable allele might confer omnigenic effect on qDTY12.1 genes. Our evolutionary analysis using non synonymous SNPs present in genes namely NCED, NAM, and DECUSSATE and qDTY12.1 genomic regions showed specific grouping of Vandana with upland cultivars only for NCED gene and its adjoining genomic regions. However, non synonymous SNPs in NAM and DECUSSATE genes and its adjoining genomic regions of drought tolerant varieties were closely related and grouped together in the phylogenetic analysis. Moreover, ecotype specific differentiation and greater nucleotide difference with wild relatives was also observed for DECUSSATE gene in rice. This finding indicates differential evolution of qDTY12.1 regions for upland and drought tolerance and omnigenic effect of NCED2T gene in qDTY12.1. Further, we propose a breeding model for enhancing genetic gain for yield under severe drought stress by incorporation of NCEDT, qDTY12.1 and other drought tolerant QTLs for membrane stability in rice.

scholarly journals Early Maturing Drought Tolerant Rice Variety BRRI dhan71 Suitable for Drought Prone Environment in Bangladesh

2020 ◽  
pp. 1-11
Author(s):  
Md. Abdul Kader ◽  
Tamal Lata Aditya ◽  
Ratna Rani Majumder ◽  
Tapas Kumer Hore ◽  
Md. Ehsanul Haq
Keyword(s):  
Drought Tolerance ◽  
Grain Yield ◽  
Amylose Content ◽  
Rice Variety ◽  
Standard Condition ◽  
Reproductive Stage ◽  
Severe Drought ◽  
Drought Condition ◽  
Drought Tolerant ◽  
Early Maturing

Drought is the second most treacherous climate-related risk for rice production in rainfed lowland areas. To counter this climate vulnerability, a new rice variety with enhanced drought tolerance was developed. The promising line IR82589-B-B-84-3 was subjected to advanced yield trials to evaluate specific and general adaptability with standard check in on-station as well as on-farm conditions of Bangladesh following randomized complete block (RCB) design with three replications in wet (T. Aman) season. IR82589-B-B-84-3 was developed as a drought-tolerant rice variety BRRI dhan71, which plant height 108 cm and growth duration 115 days after proper evaluation by National Seed Board (NSB) Bangladesh. It was found that this variety is the higher drought tolerance (up to 28 days) during reproductive stage. It can produce 5.5 t/ha grain yield in standard condition and 4.0 t/ha grain yield in medium drought condition but 3.0-3.5 t/ha grain yield in severe drought condition. Grain yield is also not affected by water scarcity during reproductive stage where parch water table depth is more than 70-80 cm from the surface and reduced soil moisture (<20%). Thousand grain weight of the variety is 24 gm, amylose content is 24%. It has long, erect and deep green colored flag leaf. The results indicated that farmers can maximize net profit by cultivating BRRI dhan71 because it required less input, early maturing than existing varieties, drought tolerant and they also get opportunity to cultivate Mustard, Barley, Potato and vegetables after harvesting it. Thus total productivity will be augmented and food security can also be sustained by the cultivation of BRRI dhan71.

scholarly journals Estimation of drought tolerance among maize landraces from mini-core collection

Genetika ◽  
2014 ◽  
Vol 46 (3) ◽  
pp. 775-788 ◽  
Author(s):  
Violeta Andjelkovic ◽  
Natalija Kravic ◽  
Vojka Babic ◽  
Dragana Ignjatovic-Micic ◽  
Zoran Dumanovic ◽  
...  
Keyword(s):  
Drought Stress ◽  
Drought Tolerance ◽  
Grain Yield ◽  
Stress Tolerance ◽  
Core Collection ◽  
High Density ◽  
Tolerance Index ◽  
Mini Core Collection ◽  
Drought Tolerant ◽  
Maize Landraces

Global climate change, its impact on stable food production in the future and possibilities to overcome the problem are the major priorities for research. Breeding varieties with increase adaptability to changing environments, together with better tolerance/resistance to abiotic stress, pest and diseases are possible solution. Maize is one of the most important crops, with high grain yield reduction induced by drought stress. In the present study twenty-six maize landraces from drought tolerant mini-core collection were tested under optimal, drought, and a combination of drought and high density stresses in the field. Morphological traits, plant height, total number of leaves, leaf length, leaf width, anthesis-silking interval and grain yield were recorded for each entry in two replications in three experiments. Besides, drought tolerant indices were evaluated to test the ability to separate more drought tolerant accessions from those with less stress tolerance. Five stress tolerance indices, including stress tolerance index (STI), mean productivity (MP), geometric mean productivity (GMP), stress susceptibility (SSI), and stress tolerance (TOL) were calculated. Data analyses revealed that STI, MP and GMP had positive and significant correlations with grain yield under all conditions. Three-dimensional diagrams displayed assignment of landraces L25, L1, L14, L3, L26, L15 and L16 to group A, based on the stress tolerance index and achieved grain yield under optimal, drought stress, and a combination of drought and high density stress. A biplot analysis efficiently separated groups of landraces with different level of drought tolerance and grain yield. Based on all obtained results, maize landraces L25, L14, L1 and L3, as the most valuable source of drought tolerance, could be recommended for further use in breeding programs.

Effect of atmospheric CO2 enrichment on the drought response of barley, durum wheat and oat

2013 ◽  
Vol 61 (2) ◽  
pp. 91-100 ◽  
Author(s):  
S. Bencze ◽  
K. Balla ◽  
T. Janda ◽  
O. Veisz
Keyword(s):  
Drought Stress ◽  
Drought Tolerance ◽  
Grain Yield ◽  
Durum Wheat ◽  
Antioxidant Enzyme ◽  
Enzyme Activities ◽  
Winter Barley ◽  
Antioxidant Enzyme Activities ◽  
Severe Drought ◽  
The Impact

Phytotron experiments were conducted to examine the impact of elevated atmospheric CO2 level (750 μmol mol−1) on the drought tolerance of winter barley (Petra), durum wheat (Mv Makaroni) and spring oat (Mv Pehely) varieties. Under drought stress conditions, the durum wheat variety was found to be unaffected by CO2 enrichment, as neither the biomass or grain yield nor the antioxidant enzyme activities changed compared to those at ambient CO2. Despite the fact that the spring oat variety had similar grain yield loss due to drought at both CO2 levels, it exhibited reduced antioxidant enzyme activities under less severe drought, indicating a slightly increased tolerance to drought. Winter barley, which exhibited an extremely positive reaction to CO2 enrichment at the control water supply level, also showed increased drought tolerance in response to high CO2. It had low glutathione reductase, glutathione-S-transferase and ascorbate peroxidase activities even at the most severe drought stress levels, while it could also fully compensate for the negative effects of drought on biomass and grain yield parameters when grown at elevated CO2.

scholarly journals Mapping of Quantitative Trait Loci (QTL) Related to Drought Tolerance in Common Bean (Phaseolus vulgaris L.) Using F2 Population from (KATB1 Χ GLP2)

2019 ◽  
Vol 8 (1) ◽  
pp. 75-86
Author(s):  
Charles Kipkoech Langat ◽  
Omwoyo Ombori ◽  
Richard Cheruiyot ◽  
Moses Gathaara ◽  
David Karanja ◽  
...  
Keyword(s):  
Drought Stress ◽  
Quantitative Trait Loci ◽  
Drought Tolerance ◽  
Grain Yield ◽  
Common Bean ◽  
Seed Yield ◽  
Quantitative Trait ◽  
Leaf Biomass ◽  
F2 Population ◽  
Drought Tolerant

Many of the common bean growing regions around the world are prone to drought stress, making drought the major challenge to production and yield stability in rainfed environments. Mapping of yield-associated loci under drought stress will offer a better understanding of the genetics of drought tolerance to the plant breeders and therefore, will accelerate the selection of drought-tolerant crop varieties through marker-assisted selection (MAS). The current study reports the identification of quantitative trait loci (QTL) linked to physiological, phenological, yield and yield-related traits using 120 F2 population derived from a cross between two common bean genotypes, KAT B1 (drought tolerant) and GLP2 (drought susceptible) evaluated under drought stress and well-watered conditions. The research was conducted at the Agricultural and Mechanization Institute, Machakos, Kenya. The F2 population showed significant variation in traits under drought stress.  From the 374 polymorphic SNP markers surveyed, 20 genomic regions were identified for various traits under drought stress, individually explaining 2.6 to 21.3% of phenotypic variation. The number of QTLs identified per trait were: 2-grain/seed yield (GY); 1-number of branches (NBP); 2-stem biomass (SB); 1-leaf biomass (LB); 1-pod biomass (PB); 3-days to flowering; 2-days to maturity (DM); 4- number of pods per plant (NPP); 1-seed weight (SW); 2-stomatal conductance (SMTL) and 1-leaf water potential (LWP). QTLs for number of pods per plant, number of grains/seeds per pod, days to flowering, leaf biomass and stem biomass were found co-locating with QTLs for grain yield on chromosome Pv02 under drought stress treatment. The cumulative effects of these QTLs on chromosomes 2 resulted in higher grain/seed yield. This study has provided information on QTLs in common bean that could be used in selection purposes for grain yield under drought conditions.

scholarly journals Present Status and Future Prospects of Drought Tolerance in Rice

2021 ◽  
Author(s):  
Veerendra Jaldhani ◽  
Ponnuvel Senguttuvel ◽  
Bathula Srikanth ◽  
Puskur Raghuveer Rao ◽  
Desiraju Subrahmanyam ◽  
...  
Keyword(s):  
Drought Stress ◽  
Drought Tolerance ◽  
Global Climate ◽  
Growth And Yield ◽  
Rice Varieties ◽  
Drought Tolerant ◽  
Area Of Concern ◽  
Genomic Regions ◽  
Upland Conditions ◽  
Good Number

Rice is an important staple food crop across the world. It is mainly cultivated under irrigated lowland and also rain-fed upland conditions where drought stress is often noticed. Global climate change predicts an intensification of drought stress in future due to uneven rainfall which was witnessed for the last few years. Confronting drought stress can deliver fruitful crop returns in rice and scope for research extents. Drought stress affects the overall plant growth and yield. A prominent improvement has been made during last two decades in our understanding of the mechanisms involved in adaptation and tolerance to drought stress in rice. In order to achieve the marked crop returns from rainfed areas, there is a requisite of drought tolerant rice varieties, and genetic improvement for drought tolerance should be a prime area of concern in the future. A huge rice germplasm is available and good number of the germplasm possess drought tolerance and these genomic regions have been exploited in developing some drought tolerant rice varieties. The application of available genotyping methodologies, the identification of traits of interest, and key genetic regions associated with the drought tolerance have opened new prospects to successfully develop new drought tolerant varieties. This chapter deals with the importance of drought tolerance in rice crop followed by the evolution of molecular markers and breeding techniques in identifying drought tolerant QTL’s/genes and their utilization in the improvement of drought tolerant rice varieties.

A comparative proteomic study of drought-tolerant and drought-sensitive soybean seedlings under drought stress

2016 ◽  
Vol 67 (5) ◽  
pp. 528 ◽  
Author(s):  
X. Yu ◽  
A. T. James ◽  
A. Yang ◽  
A. Jones ◽  
O. Mendoza-Porras ◽  
...  
Keyword(s):  
Drought Stress ◽  
Drought Tolerance ◽  
Stress Proteins ◽  
Yield Reduction ◽  
Severe Drought ◽  
Protein Abundance ◽  
Differential Abundance ◽  
Soybean Seedlings ◽  
Drought Tolerant ◽  
Sensitive Genotype

Drought is a major factor limiting plant growth causing yield reduction in crops; hence the characterisation of drought tolerance and the development of drought-tolerant crop varieties have been a goal of many crop breeding programs. Using the proteomics approach, we compared the differential protein abundance of drought-tolerant and drought-sensitive soybean leaves subjected to mild or severe drought stress. Proteins were extracted and separated using two-dimensional electrophoresis. Those protein spots with significant and more than 2-fold difference in abundance, 174 in total, were further analysed and 102 proteins were positively identified. Around 38.5% of these proteins were related to energy metabolism and photosynthetic functions, followed by those associated with defence response (36.4%) and protein metabolism (25.2%). Severe drought resulted in a greater number of proteins with differential abundance. Genotypes responded differently to drought stress with the tolerant genotype showing a higher capacity for reactive oxygen species scavenging and maintaining energy supply than the sensitive genotype. The sensitive genotype had a greater number of proteins with significant differential abundance than the tolerant genotypes due to drought. The different patterns in protein abundance induced by drought stress may potentially be utilised to screen and select candidate soybean lines with improved drought tolerance.

scholarly journals Improving Drought Tolerance in Mungbean (Vigna radiata L. Wilczek): Morpho-Physiological, Biochemical and Molecular Perspectives

Agronomy ◽  
2021 ◽  
Vol 11 (8) ◽  
pp. 1534
Author(s):  
Chandra Mohan Singh ◽  
Poornima Singh ◽  
Chandrakant Tiwari ◽  
Shalini Purwar ◽  
Mukul Kumar ◽  
...  
Keyword(s):  
Drought Stress ◽  
Drought Tolerance ◽  
Crop Production ◽  
Mitigation Strategies ◽  
Theoretical Research ◽  
Whole Genome Sequence ◽  
Complex Nature ◽  
Drought Tolerant ◽  
Breeding Programmes ◽  
The Impact

Drought stress is considered a severe threat to crop production. It adversely affects the morpho-physiological, biochemical and molecular functions of the plants, especially in short duration crops like mungbean. In the past few decades, significant progress has been made towards enhancing climate resilience in legumes through classical and next-generation breeding coupled with omics approaches. Various defence mechanisms have been reported as key players in crop adaptation to drought stress. Many researchers have identified potential donors, QTLs/genes and candidate genes associated to drought tolerance-related traits. However, cloning and exploitation of these loci/gene(s) in breeding programmes are still limited. To bridge the gap between theoretical research and practical breeding, we need to reveal the omics-assisted genetic variations associated with drought tolerance in mungbean to tackle this stress. Furthermore, the use of wild relatives in breeding programmes for drought tolerance is also limited and needs to be focused. Even after six years of decoding the whole genome sequence of mungbean, the genome-wide characterization and expression of various gene families and transcriptional factors are still lacking. Due to the complex nature of drought tolerance, it also requires integrating high throughput multi-omics approaches to increase breeding efficiency and genomic selection for rapid genetic gains to develop drought-tolerant mungbean cultivars. This review highlights the impact of drought stress on mungbean and mitigation strategies for breeding high-yielding drought-tolerant mungbean varieties through classical and modern omics technologies.

scholarly journals Drought Tolerant near Isogenic Lines (NILs) of Pusa 44 Developed through Marker Assisted Introgression of qDTY2.1 and qDTY3.1 Enhances Yield under Reproductive Stage Drought Stress

Agriculture ◽  
2021 ◽  
Vol 11 (1) ◽  
pp. 64
Author(s):  
Priyanka Dwivedi ◽  
Naleeni Ramawat ◽  
Gaurav Dhawan ◽  
Subbaiyan Gopala Krishnan ◽  
Kunnummal Kurungara Vinod ◽  
...  
Keyword(s):  
Drought Stress ◽  
Drought Tolerance ◽  
Grain Quality ◽  
Reproductive Stage ◽  
Recurrent Parent ◽  
Near Isogenic Lines ◽  
Improvement Project ◽  
Isogenic Lines ◽  
Drought Tolerant ◽  
Rice Improvement

Reproductive stage drought stress (RSDS) is detrimental for rice, which affects its productivity as well as grain quality. In the present study, we introgressed two major quantitative trait loci (QTLs), namely, qDTY2.1 and qDTY3.1, governing RSDS tolerance in a popular high yielding non-aromatic rice cultivar, Pusa 44, through marker-assisted backcross breeding (MABB). Pusa 44 is highly sensitive to RSDS, which restricts its cultivation across drought-prone environments. Foreground selection was carried out using markers, RM520 for qDTY3.1 and RM 521 for qDTY2.1. Background selection was achieved with 97 polymorphic SSR markers in tandem with phenotypic selection to achieve faster recurrent parent genome (RPG) recovery. Three successive backcrosses followed by three selfings aided RPG recoveries of 98.6% to 99.4% among 31 near isogenic lines (NILs). Fourteen NILs were found to be significantly superior in yield and grain quality under RSDS with higher drought tolerance efficiency (DTE) than Pusa 44. Among these, the evaluation of two promising NILs in the multilocational trial during Kharif 2019 showed that they were significantly superior to Pusa 44 under reproductive stage drought stress, while performing on par with Pusa 44 under normal irrigated conditions. These di-QTL pyramided drought-tolerant NILs are in the final stages of testing the All India Coordinated Rice Improvement Project varietal trials for cultivar release. Alternately, the elite drought-tolerant Pusa 44 NILs will serve as an invaluable source of drought tolerance in rice improvement.

scholarly journals Spermine: Its Emerging Role in Regulating Drought Stress Responses in Plants

Cells ◽  
2021 ◽  
Vol 10 (2) ◽  
pp. 261
Author(s):  
Md. Mahadi Hasan ◽  
Milan Skalicky ◽  
Mohammad Shah Jahan ◽  
Md. Nazmul Hossain ◽  
Zunaira Anwar ◽  
...  
Keyword(s):  
Drought Stress ◽  
Drought Tolerance ◽  
Stress Responses ◽  
Abiotic Stresses ◽  
Defense Mechanisms ◽  
Antioxidant Defense ◽  
Severe Drought ◽  
New Information ◽  
Effects Of Drought

In recent years, research on spermine (Spm) has turned up a lot of new information about this essential polyamine, especially as it is able to counteract damage from abiotic stresses. Spm has been shown to protect plants from a variety of environmental insults, but whether it can prevent the adverse effects of drought has not yet been reported. Drought stress increases endogenous Spm in plants and exogenous application of Spm improves the plants’ ability to tolerate drought stress. Spm’s role in enhancing antioxidant defense mechanisms, glyoxalase systems, methylglyoxal (MG) detoxification, and creating tolerance for drought-induced oxidative stress is well documented in plants. However, the influences of enzyme activity and osmoregulation on Spm biosynthesis and metabolism are variable. Spm interacts with other molecules like nitric oxide (NO) and phytohormones such as abscisic acid, salicylic acid, brassinosteroids, and ethylene, to coordinate the reactions necessary for developing drought tolerance. This review focuses on the role of Spm in plants under severe drought stress. We have proposed models to explain how Spm interacts with existing defense mechanisms in plants to improve drought tolerance.

scholarly journals Genetic Diversity of Selected Rice Genotypes under Water Stress Conditions

Plants ◽  
2020 ◽  
Vol 10 (1) ◽  
pp. 27
Author(s):  
Mahmoud M. Gaballah ◽  
Azza M. Metwally ◽  
Milan Skalicky ◽  
Mohamed M. Hassan ◽  
Marian Brestic ◽  
...  
Keyword(s):  
Genetic Diversity ◽  
Water Stress ◽  
Drought Stress ◽  
Drought Tolerance ◽  
Ssr Markers ◽  
Similarity Index ◽  
Stress Conditions ◽  
Yield Potential ◽  
Drought Tolerant ◽  
Rice Genotypes

Drought is the most challenging abiotic stress for rice production in the world. Thus, developing new rice genotype tolerance to water scarcity is one of the best strategies to achieve and maximize high yield potential with water savings. The study aims to characterize 16 rice genotypes for grain and agronomic parameters under normal and drought stress conditions, and genetic differentiation, by determining specific DNA markers related to drought tolerance using Simple Sequence Repeats (SSR) markers and grouping cultivars, establishing their genetic relationship for different traits. The experiment was conducted under irrigated (normal) and water stress conditions. Mean squares due to genotype × environment interactions were highly significant for major traits. For the number of panicles/plants, the genotypes Giza179, IET1444, Hybrid1, and Hybrid2 showed the maximum mean values. The required sterility percentage values were produced by genotypes IET1444, Giza178, Hybrid2, and Giza179, while, Sakha101, Giza179, Hybrid1, and Hybrid2 achieved the highest values of grain yield/plant. The genotypes Giza178, Giza179, Hybrid1, and Hybrid2, produced maximum values for water use efficiency. The effective number of alleles per locus ranged from 1.20 alleles to 3.0 alleles with an average of 1.28 alleles, and the He values for all SSR markers used varied from 0.94 to 1.00 with an average of 0.98. The polymorphic information content (PIC) values for the SSR were varied from 0.83 to 0.99, with an average of 0.95 along with a highly significant correlation between PIC values and the number of amplified alleles detected per locus. The highest similarity coefficient between Giza181 and Giza182 (Indica type) was observed and are susceptible to drought stress. High similarity percentage between the genotypes (japonica type; Sakha104 with Sakha102 and Sakha106 (0.45), Sakha101 with Sakha102 and Sakha106 (0.40), Sakha105 with Hybrid1 (0.40), Hybrid1 with Giza178 (0.40) and GZ1368-S-5-4 with Giza181 (0.40)) was also observed, which are also susceptible to drought stress. All genotypes are grouped into two major clusters in the dendrogram at 66% similarity based on Jaccard’s similarity index. The first cluster (A) was divided into two minor groups A1 and A2, in which A1 had two groups A1-1 and A1-2, containing drought-tolerant genotypes like IET1444, GZ1386-S-5-4 and Hybrid1. On the other hand, the A1-2 cluster divided into A1-2-1 containing Hybrid2 genotype and A1-2-2 containing Giza179 and Giza178 at coefficient 0.91, showing moderate tolerance to drought stress. The genotypes GZ1368-S-5-4, IET1444, Giza 178, and Giza179, could be included as appropriate materials for developing a drought-tolerant variety breeding program. Genetic diversity to grow new rice cultivars that combine drought tolerance with high grain yields is essential to maintaining food security.

Sign in / Sign up

Export Citation Format

Share Document