scholarly journals Present Status and Future Prospects of Drought Tolerance in Rice

2021 ◽  
Author(s):  
Veerendra Jaldhani ◽  
Ponnuvel Senguttuvel ◽  
Bathula Srikanth ◽  
Puskur Raghuveer Rao ◽  
Desiraju Subrahmanyam ◽  
...  
Keyword(s):  
Drought Stress ◽  
Drought Tolerance ◽  
Global Climate ◽  
Growth And Yield ◽  
Rice Varieties ◽  
Drought Tolerant ◽  
Area Of Concern ◽  
Genomic Regions ◽  
Upland Conditions ◽  
Good Number

Rice is an important staple food crop across the world. It is mainly cultivated under irrigated lowland and also rain-fed upland conditions where drought stress is often noticed. Global climate change predicts an intensification of drought stress in future due to uneven rainfall which was witnessed for the last few years. Confronting drought stress can deliver fruitful crop returns in rice and scope for research extents. Drought stress affects the overall plant growth and yield. A prominent improvement has been made during last two decades in our understanding of the mechanisms involved in adaptation and tolerance to drought stress in rice. In order to achieve the marked crop returns from rainfed areas, there is a requisite of drought tolerant rice varieties, and genetic improvement for drought tolerance should be a prime area of concern in the future. A huge rice germplasm is available and good number of the germplasm possess drought tolerance and these genomic regions have been exploited in developing some drought tolerant rice varieties. The application of available genotyping methodologies, the identification of traits of interest, and key genetic regions associated with the drought tolerance have opened new prospects to successfully develop new drought tolerant varieties. This chapter deals with the importance of drought tolerance in rice crop followed by the evolution of molecular markers and breeding techniques in identifying drought tolerant QTL’s/genes and their utilization in the improvement of drought tolerant rice varieties.

scholarly journals Physiological and Proteomic Analysis Revealed the Response Mechanisms of two Different Grought-resistant Maize Varieties

2021 ◽  
Author(s):  
Hongjie Li ◽  
Mei Yang ◽  
Chengfeng Zhao ◽  
Yifan Wang ◽  
Renhe Zhang
Keyword(s):  
Drought Stress ◽  
Drought Tolerance ◽  
Stress Responses ◽  
Molecular Chaperones ◽  
Electron Flow ◽  
Photochemical Efficiency ◽  
Growth And Yield ◽  
Protective Mechanism ◽  
Drought Tolerant ◽  
Maize Varieties

Abstract Background: Drought stress seriously limits the seedling growth and yield of maize. Despite previous studies on drought resistance mechanisms by which maize cope with water deficient, the link between physiological and molecular variations are largely unknown. To reveal the complex regulatory mechanisms, comparative physiology and proteomic analyses were conducted to investigate the stress responses of two maize cultivars with contrasting tolerance to drought stress. Results: Physiological results showed that SD609 (drought-tolerant) maintains higher photochemical efficiency by enhancing CEF (cyclic electron flow) protective mechanism and antioxidative enzymes activities. Proteomics analysis revealed a total of 198 and 102 proteins were differentially expressed in SD609 and SD902, respectively. Further enrichment analysis indicated that drought-tolerant ‘SD609’ increased the expression of proteins related to photosynthesis, antioxidants/detoxifying enzymes, molecular chaperones and metabolic enzymes. The up-regulation proteins related to PSII repair and photoprotection mechanisms resulted in more efficient photochemical capacity in tolerant variety under moderate drought. However, the drought-sensitive ‘SD902’ only induced molecular chaperones and sucrose synthesis pathways, and failed to protect the impaired photosystem. Further analysis indicated that proteins related to the electron transport chain, redox homeostasis and heat shock proteins (HSPs) could be important in protecting plants from drought stress. Conclusions: Our experiments explored the mechanism of drought tolerance, and obtained detailed information about the interconnection of physiological research and protein research. In summary, our findings could provide new clues into further understanding of drought tolerance mechanisms in maize.

scholarly journals Probable omnigenic effect and evolutionary insights of aerobic adaptation allele OsNCED2T on qDTY12.1 effecting grain yield under reproductive stage drought stress in rice

2021 ◽  
Author(s):  
C Parameswaran ◽  
B Cayalvizhi ◽  
S Sanghamitra ◽  
N Anandan ◽  
K Jawahar Lal ◽  
...  
Keyword(s):  
Drought Stress ◽  
Drought Tolerance ◽  
Grain Yield ◽  
Genomic Region ◽  
Favorable Allele ◽  
Severe Drought ◽  
Evolutionary Analysis ◽  
Synonymous Snps ◽  
Drought Tolerant ◽  
Genomic Regions

AbstractYield associated quantitative trait loci (qDTY) under drought stress provides significant advantage for grain yield in rice. The major, stable qDTY12.1 was identified in a mapping population developed from upland cultivars Vandana and Way Rarem. Further, introgression line comprising of qDTY12.1 genomic region was characterized to have multiple genes (NAM, DECUSSATE) regulating the drought tolerance under severe drought stress substantiated through recently proposed omnigenic model for complex traits. Recently, plastid localized NCED2T allele present within the qDTY12.1 genomic region was characterized for conferring aerobic adaptation in lowland varieties. Since, NCED2T is evolutionary fixed in upland cultivars and Vandana was found to have the favorable allele of NCED2T, we hypothesized that this favorable allele might confer omnigenic effect on qDTY12.1 genes. Our evolutionary analysis using non synonymous SNPs present in genes namely NCED, NAM, and DECUSSATE and qDTY12.1 genomic regions showed specific grouping of Vandana with upland cultivars only for NCED gene and its adjoining genomic regions. However, non synonymous SNPs in NAM and DECUSSATE genes and its adjoining genomic regions of drought tolerant varieties were closely related and grouped together in the phylogenetic analysis. Moreover, ecotype specific differentiation and greater nucleotide difference with wild relatives was also observed for DECUSSATE gene in rice. This finding indicates differential evolution of qDTY12.1 regions for upland and drought tolerance and omnigenic effect of NCED2T gene in qDTY12.1. Further, we propose a breeding model for enhancing genetic gain for yield under severe drought stress by incorporation of NCEDT, qDTY12.1 and other drought tolerant QTLs for membrane stability in rice.

scholarly journals Improving Drought Tolerance in Mungbean (Vigna radiata L. Wilczek): Morpho-Physiological, Biochemical and Molecular Perspectives

Agronomy ◽  
2021 ◽  
Vol 11 (8) ◽  
pp. 1534
Author(s):  
Chandra Mohan Singh ◽  
Poornima Singh ◽  
Chandrakant Tiwari ◽  
Shalini Purwar ◽  
Mukul Kumar ◽  
...  
Keyword(s):  
Drought Stress ◽  
Drought Tolerance ◽  
Crop Production ◽  
Mitigation Strategies ◽  
Theoretical Research ◽  
Whole Genome Sequence ◽  
Complex Nature ◽  
Drought Tolerant ◽  
Breeding Programmes ◽  
The Impact

Drought stress is considered a severe threat to crop production. It adversely affects the morpho-physiological, biochemical and molecular functions of the plants, especially in short duration crops like mungbean. In the past few decades, significant progress has been made towards enhancing climate resilience in legumes through classical and next-generation breeding coupled with omics approaches. Various defence mechanisms have been reported as key players in crop adaptation to drought stress. Many researchers have identified potential donors, QTLs/genes and candidate genes associated to drought tolerance-related traits. However, cloning and exploitation of these loci/gene(s) in breeding programmes are still limited. To bridge the gap between theoretical research and practical breeding, we need to reveal the omics-assisted genetic variations associated with drought tolerance in mungbean to tackle this stress. Furthermore, the use of wild relatives in breeding programmes for drought tolerance is also limited and needs to be focused. Even after six years of decoding the whole genome sequence of mungbean, the genome-wide characterization and expression of various gene families and transcriptional factors are still lacking. Due to the complex nature of drought tolerance, it also requires integrating high throughput multi-omics approaches to increase breeding efficiency and genomic selection for rapid genetic gains to develop drought-tolerant mungbean cultivars. This review highlights the impact of drought stress on mungbean and mitigation strategies for breeding high-yielding drought-tolerant mungbean varieties through classical and modern omics technologies.

scholarly journals Drought Tolerant near Isogenic Lines (NILs) of Pusa 44 Developed through Marker Assisted Introgression of qDTY2.1 and qDTY3.1 Enhances Yield under Reproductive Stage Drought Stress

Agriculture ◽  
2021 ◽  
Vol 11 (1) ◽  
pp. 64
Author(s):  
Priyanka Dwivedi ◽  
Naleeni Ramawat ◽  
Gaurav Dhawan ◽  
Subbaiyan Gopala Krishnan ◽  
Kunnummal Kurungara Vinod ◽  
...  
Keyword(s):  
Drought Stress ◽  
Drought Tolerance ◽  
Grain Quality ◽  
Reproductive Stage ◽  
Recurrent Parent ◽  
Near Isogenic Lines ◽  
Improvement Project ◽  
Isogenic Lines ◽  
Drought Tolerant ◽  
Rice Improvement

Reproductive stage drought stress (RSDS) is detrimental for rice, which affects its productivity as well as grain quality. In the present study, we introgressed two major quantitative trait loci (QTLs), namely, qDTY2.1 and qDTY3.1, governing RSDS tolerance in a popular high yielding non-aromatic rice cultivar, Pusa 44, through marker-assisted backcross breeding (MABB). Pusa 44 is highly sensitive to RSDS, which restricts its cultivation across drought-prone environments. Foreground selection was carried out using markers, RM520 for qDTY3.1 and RM 521 for qDTY2.1. Background selection was achieved with 97 polymorphic SSR markers in tandem with phenotypic selection to achieve faster recurrent parent genome (RPG) recovery. Three successive backcrosses followed by three selfings aided RPG recoveries of 98.6% to 99.4% among 31 near isogenic lines (NILs). Fourteen NILs were found to be significantly superior in yield and grain quality under RSDS with higher drought tolerance efficiency (DTE) than Pusa 44. Among these, the evaluation of two promising NILs in the multilocational trial during Kharif 2019 showed that they were significantly superior to Pusa 44 under reproductive stage drought stress, while performing on par with Pusa 44 under normal irrigated conditions. These di-QTL pyramided drought-tolerant NILs are in the final stages of testing the All India Coordinated Rice Improvement Project varietal trials for cultivar release. Alternately, the elite drought-tolerant Pusa 44 NILs will serve as an invaluable source of drought tolerance in rice improvement.

scholarly journals Genetic Diversity of Selected Rice Genotypes under Water Stress Conditions

Plants ◽  
2020 ◽  
Vol 10 (1) ◽  
pp. 27
Author(s):  
Mahmoud M. Gaballah ◽  
Azza M. Metwally ◽  
Milan Skalicky ◽  
Mohamed M. Hassan ◽  
Marian Brestic ◽  
...  
Keyword(s):  
Genetic Diversity ◽  
Water Stress ◽  
Drought Stress ◽  
Drought Tolerance ◽  
Ssr Markers ◽  
Similarity Index ◽  
Stress Conditions ◽  
Yield Potential ◽  
Drought Tolerant ◽  
Rice Genotypes

Drought is the most challenging abiotic stress for rice production in the world. Thus, developing new rice genotype tolerance to water scarcity is one of the best strategies to achieve and maximize high yield potential with water savings. The study aims to characterize 16 rice genotypes for grain and agronomic parameters under normal and drought stress conditions, and genetic differentiation, by determining specific DNA markers related to drought tolerance using Simple Sequence Repeats (SSR) markers and grouping cultivars, establishing their genetic relationship for different traits. The experiment was conducted under irrigated (normal) and water stress conditions. Mean squares due to genotype × environment interactions were highly significant for major traits. For the number of panicles/plants, the genotypes Giza179, IET1444, Hybrid1, and Hybrid2 showed the maximum mean values. The required sterility percentage values were produced by genotypes IET1444, Giza178, Hybrid2, and Giza179, while, Sakha101, Giza179, Hybrid1, and Hybrid2 achieved the highest values of grain yield/plant. The genotypes Giza178, Giza179, Hybrid1, and Hybrid2, produced maximum values for water use efficiency. The effective number of alleles per locus ranged from 1.20 alleles to 3.0 alleles with an average of 1.28 alleles, and the He values for all SSR markers used varied from 0.94 to 1.00 with an average of 0.98. The polymorphic information content (PIC) values for the SSR were varied from 0.83 to 0.99, with an average of 0.95 along with a highly significant correlation between PIC values and the number of amplified alleles detected per locus. The highest similarity coefficient between Giza181 and Giza182 (Indica type) was observed and are susceptible to drought stress. High similarity percentage between the genotypes (japonica type; Sakha104 with Sakha102 and Sakha106 (0.45), Sakha101 with Sakha102 and Sakha106 (0.40), Sakha105 with Hybrid1 (0.40), Hybrid1 with Giza178 (0.40) and GZ1368-S-5-4 with Giza181 (0.40)) was also observed, which are also susceptible to drought stress. All genotypes are grouped into two major clusters in the dendrogram at 66% similarity based on Jaccard’s similarity index. The first cluster (A) was divided into two minor groups A1 and A2, in which A1 had two groups A1-1 and A1-2, containing drought-tolerant genotypes like IET1444, GZ1386-S-5-4 and Hybrid1. On the other hand, the A1-2 cluster divided into A1-2-1 containing Hybrid2 genotype and A1-2-2 containing Giza179 and Giza178 at coefficient 0.91, showing moderate tolerance to drought stress. The genotypes GZ1368-S-5-4, IET1444, Giza 178, and Giza179, could be included as appropriate materials for developing a drought-tolerant variety breeding program. Genetic diversity to grow new rice cultivars that combine drought tolerance with high grain yields is essential to maintaining food security.

scholarly journals Selection of drought-tolerant rice varieties from the rice variety bank of Can Tho university

2019 ◽  
Vol 02 ◽  
pp. 65-70
Author(s):  
Tin Q. Huynh
Keyword(s):  
Water Stress ◽  
Drought Tolerance ◽  
Rice Variety ◽  
Mekong Delta ◽  
Rice Cultivation ◽  
Rice Varieties ◽  
Wetting And Drying ◽  
Drought Tolerant ◽  
Susceptible Control ◽  
Rice Improvement

Drought has been a big problem and damaged seriously to rice cultivation and production in Vietnam and the Mekong Delta region; evaluating drought tolerance of rice is a major objective for the rice improvement programmes in Can Tho University. Fifty-two collected rice varieties including resistant and susceptible control varieties were screened for water stress under the artificial drought condition. Marker RM223 was used to identify the drought tolerance genotypes for some selected varieties with good and moderate tolerant scores. After 30 days of water stress, the results were 6 varieties of good tolerant, 8 varieties of moderate tolerance, 36 varieties of moderately susceptible and 2 varieties of susceptible to drought. Analyses of PCR showed that 10 varieties expressed the similar bands with the resistant control variety. Four varieties (LH8, MTL812, Lua Canh and VB1) with good tolerant to drought were recommended to use for genetic materials of rice breeding program and applying in alternative wetting and drying irrigation technique for rice cultivation.

scholarly journals Drought Stress in Grain Legumes: Effects, Tolerance Mechanisms and Management

Agronomy ◽  
2021 ◽  
Vol 11 (12) ◽  
pp. 2374
Author(s):  
Marium Khatun ◽  
Sumi Sarkar ◽  
Farzana Mustafa Era ◽  
A. K. M. Mominul Islam ◽  
Md. Parvez Anwar ◽  
...  
Keyword(s):  
Drought Stress ◽  
Drought Tolerance ◽  
Association Studies ◽  
Stomatal Closure ◽  
Grain Legumes ◽  
Grain Legume ◽  
Developmental Cycle ◽  
Genome Wide Association Studies ◽  
Tolerance Mechanisms ◽  
Drought Tolerant

Grain legumes are important sources of proteins, essential micronutrients and vitamins and for human nutrition. Climate change, including drought, is a severe threat to grain legume production throughout the world. In this review, the morpho-physiological, physio-biochemical and molecular levels of drought stress in legumes are described. Moreover, different tolerance mechanisms, such as the morphological, physio-biochemical and molecular mechanisms of legumes, are also reviewed. Moreover, various management approaches for mitigating the drought stress effects in grain legumes are assessed. Reduced leaf area, shoot and root growth, chlorophyll content, stomatal conductance, CO2 influx, nutrient uptake and translocation, and water-use efficiency (WUE) ultimately affect legume yields. The yield loss of grain legumes varies from species to species, even variety to variety within a species, depending upon the severity of drought stress and several other factors, such as phenology, soil textures and agro-climatic conditions. Closure of stomata leads to an increase in leaf temperature by reducing the transpiration rate, and, so, the legume plant faces another stress under drought stress. The biosynthesis of reactive oxygen species (ROS) is the most detrimental effect of drought stress. Legumes can adapt to the drought stress by changing their morphology, physiology and molecular mechanism. Improved root system architecture (RSA), reduced number and size of leaves, stress-induced phytohormone, stomatal closure, antioxidant defense system, solute accumulation (e.g., proline) and altered gene expression play a crucial role in drought tolerance. Several agronomic, breeding both conventional and molecular, biotechnological approaches are used as management practices for developing a drought-tolerant legume without affecting crop yield. Exogenous application of plant-growth regulators (PGRs), osmoprotectants and inoculation by Rhizobacteria and arbuscular mycorrhizal fungi promotes drought tolerance in legumes. Genome-wide association studies (GWASs), genomic selection (GS), marker-assisted selection (MAS), OMICS-based technology and CRISPR/Cas9 make the breeding work easy and save time in the developmental cycle to get resistant legumes. Several drought-resistant grain legumes, such as the chickpea, faba bean, common bean and pigeon pea, were developed by different institutions. Drought-tolerant transgenic legumes, for example, chickpeas, are developed by introgressing desired genes through breeding and biotechnological approaches. Several quantitative trait loci (QTLs), candidate genes occupying drought-tolerant traits, are identified from a variety of grain legumes, but not all are under proper implementation. Hence, more research should be conducted to improve the drought-tolerant traits of grain legumes for avoiding losses during drought.

scholarly journals Genome-wide association study for yield and yield related traits under reproductive stage drought in a diverse indica-aus rice panel

2020 ◽  
Author(s):  
Aditi Bhandari ◽  
Nitika Sandhu ◽  
Jérôme Bartholome ◽  
Tuong-Vi Cao-Hamadoun ◽  
Nourollah Ahmadi ◽  
...  
Keyword(s):  
Grain Yield ◽  
Field Experiments ◽  
Genome Wide Association Study ◽  
Reproductive Stage ◽  
Phenotypic Variance ◽  
Rice Varieties ◽  
Drought Tolerant ◽  
Genome Wide ◽  
Close Proximity ◽  
Genomic Regions

Abstract Background Reproductive-stage drought stress is a major impediment to rice production globally. Conventional and marker-assisted breeding strategies for developing drought tolerant rice varieties are being optimized by mining and exploiting adaptive traits, genetic diversity; identifying the alleles and understanding their interactions with genetic backgrounds for contributing to drought tolerance. Field experiments were conducted in this study to identify marker-trait associations (MTAs) involved in response to yield under reproductive-stage drought. A diverse set of 280 indica-aus accessions was phenotyped for grain yield and nine yield-related traits under normal condition and under two managed drought environments. The accessions were genotyped with 215,250 single nucleotide polymorphism markers. Results The study identified a total of 220 significant MTAs and candidate gene analysis within 200kb window centred from GWAS identified SNP peaks detected these MTAs within/ in close proximity to 47 genes, 4 earlier reported major grain yield QTLs and 8 novel QTLs for 10 traits. The significant MTAs were majorly located on chromosomes 1, 2, 5, 6, 11 and 12 and the percent phenotypic variance captured for these traits ranged from 5 to 88%. The significant positive correlation of grain yield with yield-related traits, except flowering time, observed under different environments point towards their contribution in improving rice yield under drought. Seven promising accessions were identified for use in future genomics-assisted breeding program targeting grain yield improvement under drought. Conclusion These results provide a promising insight into the complex-genetic architecture of grain yield under reproductive-stage drought under different environments. Validation of major genomic regions reported in the study can be effectively used to develop drought tolerant varieties following marker-assisted selection as well as to identify genes and understanding the associated physiological mechanisms.

scholarly journals Physiological Responses under Drought Stress of Improved Drought-Tolerant Rice Lines and their Parents

2018 ◽  
Vol 46 (2) ◽  
pp. 679-687 ◽  
Author(s):  
Preeyanuch LARKUNTHOD ◽  
Noppawan NOUNJAN ◽  
Jonaliza L SIANGLIW ◽  
Theerayut TOOJINDA ◽  
Jirawat SANITCHON ◽  
...  
Keyword(s):  
Drought Stress ◽  
Drought Tolerance ◽  
Water Status ◽  
Physiological Responses ◽  
High Water ◽  
Recurrent Parent ◽  
Potential Candidate ◽  
Substitution Lines ◽  
Chromosome Segment Substitution Lines ◽  
Drought Tolerant

Many of the economically important rice cultivars including ‘Khao Dawk Mali 105’ (KDML105) or jasmine rice, one of the world’s famous rice exported from Thailand suffers from drought due to erratic rainfalls and limited irrigation. To improve drought tolerance and reserve genetic background of KDML105, chromosome segment substitution lines (CSSL) containing drought tolerant quantitative trait loci (DT-QTL) has been previously developed by backcrossing between KDML105 and drought tolerant donor, IR58586-F2-CA-143 (DH212). To understand the physiological responses related to drought tolerance in CSSL lines compared to parents, two CSSLs namely CSSL1-16 and CSSL1-18, respectively were used in this study. Twenty-one-d-old hydroponically grown plants were subjected to 20% PEG for 0, 7, 14 d and then recovered from stress for 3 d. The results indicated that CSSL lines especially, CSSL1-16 showed better performance under drought stress compared to their recurrent parent. Drought tolerance superior CSSL1-16 line was indicated by high water status (high relative water content and leaf water potential), good osmotic adjustment, high proline and greater membrane stability. Moreover, this line was able to resume growth after stress recovery whereas other lines/cultivar could not recover. Similarly, drought tolerant donor showed high water status suggesting that well-maintained plant water status was associated with drought tolerant trait. It could be concluded that the highest drought tolerant line was CSSL1-16 followed by DH212, CSSL1-18 and KDML105. It would be interesting to go further into introgressed section in CSSL1-16 to identify potential candidate genes in DT-QTL for breeding drought tolerant rice in the future.

Phytohormone cross-talk and antioxidant gadgets tussles osmotic stress in indigenous rice landraces during seed germination

2020 ◽  
Author(s):  
R. Anupriya ◽  
Sugitha Thankappan ◽  
A. Senthil ◽  
D. Rajakumar ◽  
Geetha S ◽  
...  
Keyword(s):  
Drought Stress ◽  
Seed Germination ◽  
Drought Tolerance ◽  
Cross Talk ◽  
Tamil Nadu ◽  
Critical Role ◽  
Hydrolytic Enzyme ◽  
Rice Landraces ◽  
Drought Tolerant ◽  
Root And Shoot Length

Abstract Seed germination plays a critical role in determining rice productivity under drought stress. We evaluated 100 traditional rice landraces originated from different agro-ecological zones of Tamil Nadu along with drought- susceptible (IR 64) and drought- tolerant (IR 64 DRT) checks. Moisture stress was induced using PEG 6000 and screening done over a range of osmotic potentials (-) 10 bars, (-) 12.5 bars and (-)15 bars for a period of 5 d. Physio-morphological traits such as germination rate, survival per cent, root and shoot length, vigor index, RS ratio and relative water content (RWC) were assessed during early drought stress. We observed significant changes in the seed macromolecules, phytohormone levels (GA and IAA), osmolytes and antioxidant responses (catalase and superoxide dismutase) between drought stress and control treatments. Kuliyadichan registered significantly higher IAA and GA (44% and 35% respectively over drought tolerant check IR 64 DRT) at drought stress, whereas all the landraces showed an elevated catalase activity. In PC analysis, first three PCs captured 88.93% of the total variation; significant differences were detected among genotypes with respect to the studied parameters. Six traditional landraces such as Kuliyadichan, Rajalakshmi, Sabhagidhan, Nootripathu, Chandaikar and Mallikar were selected and their inherent drought tolerance was associated with metabolic responses viz., triggered hydrolytic enzyme activities, hormonal cross-talk, ROS signaling and catalase under drought stress compared to drought sensitive IR64. Hence, these genotypes can be used as potential donor candidates towards genetic improvement of drought tolerance in rice.

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