scholarly journals Effects of Fe3O4 Nanoparticle Stress on the Growth and Development of Rocket Eruca sativa

2019 ◽  
Vol 2019 ◽  
pp. 1-10 ◽  
Author(s):  
Ilona Plaksenkova ◽  
Marija Jermaļonoka ◽  
Linda Bankovska ◽  
Inese Gavarāne ◽  
Vjačeslavs Gerbreders ◽  
...  
Keyword(s):  
Mirna Expression ◽  
Growth And Development ◽  
Posttranscriptional Regulation ◽  
Germination Rate ◽  
Regulation Of Gene Expression ◽  
Shoot Elongation ◽  
Crop Productivity ◽  
Stress Factors ◽  
Eruca Sativa ◽  
Mirna Expression Level

Plants exposed to stress use the variety of gene regulatory mechanisms to achieve cellular homeostasis, including posttranscriptional regulation of gene expression where microRNAs (miRNAs) play a pivotal role. Since various environmental stress factors such as nanoparticles affect crop productivity and quality, the aim of the present study was to evaluate the genotoxicity level and to estimate miRNA expression level and chlorophyll a level in the magnetite (Fe3O4) nanoparticle-stressed rocket (Eruca sativa Mill.) seedlings grown in hydroponics. Rocket seedlings were exposed to 1 mg/L, 2 mg/L, and 4 mg/L Fe3O4 nanoparticles, and after 5 weeks, seed germination rate, root-shoot elongation, genotoxicity, chlorophyll a, and miRNA expression levels were evaluated. The obtained results indicated that 1 mg/L, 2 mg/L, and 4 mg/L concentrations of Fe3O4 nanoparticles induce low genotoxicity and have a positive effect on the growth and development of rocket seedlings and that nanoparticles may improve the ability of plants to stand against environmental stresses.

scholarly journals STAU2 protein level is controlled by caspases and the CHK1 pathway and regulates cell cycle progression in the non-transformed hTERT-RPE1 cells

2021 ◽  
Vol 22 (1) ◽  
Author(s):  
Lionel Condé ◽  
Yulemi Gonzalez Quesada ◽  
Florence Bonnet-Magnaval ◽  
Rémy Beaujois ◽  
Luc DesGroseillers
Keyword(s):  
Gene Expression ◽  
Cell Cycle ◽  
Cell Proliferation ◽  
Dna Damage ◽  
Steady State ◽  
Posttranscriptional Regulation ◽  
Cell Cycle Progression ◽  
Rna Binding ◽  
Regulation Of Gene Expression ◽  
Cycle Progression

AbstractBackgroundStaufen2 (STAU2) is an RNA binding protein involved in the posttranscriptional regulation of gene expression. In neurons, STAU2 is required to maintain the balance between differentiation and proliferation of neural stem cells through asymmetric cell division. However, the importance of controlling STAU2 expression for cell cycle progression is not clear in non-neuronal dividing cells. We recently showed that STAU2 transcription is inhibited in response to DNA-damage due to E2F1 displacement from theSTAU2gene promoter. We now study the regulation of STAU2 steady-state levels in unstressed cells and its consequence for cell proliferation.ResultsCRISPR/Cas9-mediated and RNAi-dependent STAU2 depletion in the non-transformed hTERT-RPE1 cells both facilitate cell proliferation suggesting that STAU2 expression influences pathway(s) linked to cell cycle controls. Such effects are not observed in the CRISPR STAU2-KO cancer HCT116 cells nor in the STAU2-RNAi-depleted HeLa cells. Interestingly, a physiological decrease in the steady-state level of STAU2 is controlled by caspases. This effect of peptidases is counterbalanced by the activity of the CHK1 pathway suggesting that STAU2 partial degradation/stabilization fines tune cell cycle progression in unstressed cells. A large-scale proteomic analysis using STAU2/biotinylase fusion protein identifies known STAU2 interactors involved in RNA translation, localization, splicing, or decay confirming the role of STAU2 in the posttranscriptional regulation of gene expression. In addition, several proteins found in the nucleolus, including proteins of the ribosome biogenesis pathway and of the DNA damage response, are found in close proximity to STAU2. Strikingly, many of these proteins are linked to the kinase CHK1 pathway, reinforcing the link between STAU2 functions and the CHK1 pathway. Indeed, inhibition of the CHK1 pathway for 4 h dissociates STAU2 from proteins involved in translation and RNA metabolism.ConclusionsThese results indicate that STAU2 is involved in pathway(s) that control(s) cell proliferation, likely via mechanisms of posttranscriptional regulation, ribonucleoprotein complex assembly, genome integrity and/or checkpoint controls. The mechanism by which STAU2 regulates cell growth likely involves caspases and the kinase CHK1 pathway.

MicroRNAs in domestic livestock

2013 ◽  
Vol 45 (16) ◽  
pp. 685-696 ◽  
Author(s):  
Attia Fatima ◽  
Dermot G. Morris
Keyword(s):  
Posttranscriptional Regulation ◽  
Noncoding Rna ◽  
Expression Patterns ◽  
Regulation Of Gene Expression ◽  
Nucleotide Polymorphisms ◽  
Single Nucleotide ◽  
Small Noncoding Rna ◽  
Domestic Livestock ◽  
Temporal Expression Pattern ◽  
Mrna Binding

microRNAs (miRNAs) are a class of small noncoding RNA that bind to complementary sequences in the untranslated regions of multiple target mRNAs resulting in posttranscriptional regulation of gene expression. The recent discovery and expression-profiling studies of miRNAs in domestic livestock have revealed both their tissue-specific and temporal expression pattern. In addition, breed-dependent expression patterns as well as single nucleotide polymorphisms in either the miRNA or in the target mRNA binding site have revealed associations with traits of economic importance and highlight the potential use of miRNAs in future genomic selection programs.

scholarly journals Lack of Conserved miRNA Deregulation in HPV-Induced Squamous Cell Carcinomas

Biomolecules ◽  
2021 ◽  
Vol 11 (5) ◽  
pp. 764
Author(s):  
Jaroslav Nunvar ◽  
Lucie Pagacova ◽  
Zuzana Vojtechova ◽  
Nayara Trevisan Doimo de Azevedo ◽  
Jana Smahelova ◽  
...  
Keyword(s):  
Squamous Cell ◽  
Mirna Expression ◽  
Hpv Infection ◽  
Squamous Cell Carcinomas ◽  
Human Papillomaviruses ◽  
Hpv Status ◽  
Mirna Expression Level ◽  
Cervical Tumors ◽  
Mirna Deregulation ◽  
Generation Sequencing

Squamous cell carcinomas (SCCs) in the anogenital and head and neck regions are associated with high-risk types of human papillomaviruses (HR-HPV). Deregulation of miRNA expression is an important contributor to carcinogenesis. This study aimed to pinpoint commonly and uniquely deregulated miRNAs in cervical, anal, vulvar, and tonsillar tumors of viral or non-viral etiology, searching for a common set of deregulated miRNAs linked to HPV-induced carcinogenesis. RNA was extracted from tumors and nonmalignant tissues from the same locations. The miRNA expression level was determined by next-generation sequencing. Differential expression of miRNAs was calculated, and the patterns of miRNA deregulation were compared between tumors. The total of deregulated miRNAs varied between tumors of different locations by two orders of magnitude, ranging from 1 to 282. The deregulated miRNA pool was largely tumor-specific. In tumors of the same location, a low proportion of miRNAs were exclusively deregulated and no deregulated miRNA was shared by all four types of HPV-positive tumors. The most significant overlap of deregulated miRNAs was found between tumors which differed in location and HPV status (HPV-positive cervical tumors vs. HPV-negative vulvar tumors). Our results imply that HPV infection does not elicit a conserved miRNA deregulation in SCCs.

scholarly journals Биологизированная технология возделывания сахарной свеклы

2020 ◽  
Author(s):  
V.S. Sergeev ◽  
◽  
D.R. Mukminov ◽  
◽  
Keyword(s):  
Sugar Beet ◽  
Plant Protection ◽  
Sugar Content ◽  
Crop Productivity ◽  
Production Costs ◽  
Stress Factors ◽  
Mineral Fertilizers ◽  
Biological Products ◽  
Traditional Technology ◽  
The Republic

Sugar beet is the main technical crop in the Republic of Bashkortostan. Beet growing in the region is carried out in the zone of risky agriculture. Based on the bioproducts produced for Beta vulgaris growing, the team of the BashInkom Scientific & Innovation Enterprise together with scientists from the Research Institute of Sugar Beet and Sugar and leading Russian beet growers improved and optimized the traditional technology, which, even under stressful conditions (drought, temperature decrease, waterlogging, freezing, toxic chemical oppression, lack of readily soluble nutrients) and a significant reduction in production costs, increases crop productivity by 20% and sugar content by 0.1-0.3%. Production experiments were carried out in beet-growing farms of the republic: farming company “Mukminov”, LLC “Voskhod” (Gafuri region), LLC farming company “Salavat”, LLC “Michurina” (Aurgazinsky district), LLC “Region-Agro” (Davlekanovsky district), etc. Research results confirm the effectiveness of the use of biological products and biofertilizers in sugar beet cultivation technology. The increase in the yield amounted to 2-10 t/ha compared to traditional technology; sugar content increased to 0.3%; finance costs that are attributable to the acquisition and use of biological products and bioactivated fertilizers have paid off, and high profitability is guaranteed. Conclusions: 1. Biological products and bioactivated fertilizers are an integral and mandatory element in the technology of sugar beet cultivation, as well as an innovative solution in protecting plants from environmental stress factors and in balancing plant nutrition by carrying out leaf feeding in key phases of growth and development. 2. Biologized technology allows increasing the yield of sugar beet by 20% and reducing the cost of chemical plant protection products and mineral fertilizers by 1.2-1.3 times. 3. Economic efficiency in the cultivation of sugar beet from the use of biological products and bioactivated fertilizers is up to 8 net profit per 1 RUB production costs.

scholarly journals Research Advances on Tall Fescue Salt Tolerance: From Root Signaling to Molecular and Metabolic Adjustment

2017 ◽  
Vol 142 (5) ◽  
pp. 337-345 ◽  
Author(s):  
Erick Amombo ◽  
Huiying Li ◽  
Jinmin Fu
Keyword(s):  
Salinity Stress ◽  
Tall Fescue ◽  
Festuca Arundinacea ◽  
Crop Productivity ◽  
Stress Factors ◽  
Adaptive Responses ◽  
Salt Tolerant ◽  
Cool Season ◽  
Abiotic Stress Factors ◽  
Metabolic Adjustment

Soil salinity is one of the major abiotic stress factors that constrain plant growth and limit crop productivity. About a quarter of the global land area is affected by salinity; therefore, there is increased need to develop salt-tolerant crops. Tall fescue (Festuca arundinacea) is one of the most important cool-season turfgrasses, which has medium tolerance to salinity and has a promising potential to be used as a turfgrass under saline conditions. However, up to now, the maximum use of tall fescue under salinity stress is still limited by inadequate scientific literature. Recent studies have attempted to identify various adaptive responses to salinity stress at molecular, cellular, metabolic, and physiological levels in tall fescue. The successful integration of information concerning signal sensing, molecular tools with recent advances in -omics would certainly provide a clue for creating salt-tolerant tall fescue. Because salinity limits water availability to plants via hindering water absorption, and by inducing physiological drought, here we review and propose a probable mechanism of tall fescue response to salinity stress and to similar effects induced by drought based on published literature.

scholarly journals FOXO regulates RNA interference in Drosophila and protects from RNA virus infection

2015 ◽  
Vol 112 (47) ◽  
pp. 14587-14592 ◽  
Author(s):  
Michael J. Spellberg ◽  
Michael T. Marr
Keyword(s):  
Rna Interference ◽  
Virus Infection ◽  
Gene Silencing ◽  
Small Rna ◽  
Stress Responses ◽  
Posttranscriptional Regulation ◽  
Rna Virus ◽  
Regulation Of Gene Expression ◽  
Cellular Physiology ◽  
Metabolic Conditions

Small RNA pathways are important players in posttranscriptional regulation of gene expression. These pathways play important roles in all aspects of cellular physiology from development to fertility to innate immunity. However, almost nothing is known about the regulation of the central genes in these pathways. The forkhead box O (FOXO) family of transcription factors is a conserved family of DNA-binding proteins that responds to a diverse set of cellular signals. FOXOs are crucial regulators of cellular homeostasis that have a conserved role in modulating organismal aging and fitness. Here, we show that Drosophila FOXO (dFOXO) regulates the expression of core small RNA pathway genes. In addition, we find increased dFOXO activity results in an increase in RNA interference (RNAi) efficacy, establishing a direct link between cellular physiology and RNAi. Consistent with these findings, dFOXO activity is stimulated by viral infection and is required for effective innate immune response to RNA virus infection. Our study reveals an unanticipated connection among dFOXO, stress responses, and the efficacy of small RNA-mediated gene silencing and suggests that organisms can tune their gene silencing in response to environmental and metabolic conditions.

scholarly journals A mikro-RNS-ek patogenetikai és diagnosztikai szerepe mellékvesekéreg-carcinomában

2018 ◽  
Vol 159 (7) ◽  
pp. 245-251 ◽  
Author(s):  
Zoltán Nagy ◽  
Ábel Decmann ◽  
Pál Perge ◽  
Péter Igaz
Keyword(s):  
Posttranscriptional Regulation ◽  
Regulation Of Gene Expression ◽  
Adrenocortical Cancer ◽  
Altered Expression ◽  
Rna Molecules ◽  
Adrenocortical Adenomas ◽  
Non Coding Rna ◽  
Adrenocortical Tumours ◽  
Clinical Consequences ◽  
Advanced Stages

Abstract: Adrenocortical tumours are quite prevalent. Most of these tumours are benign, hormonally inactive adrenocortical adenomas. Rare hormone-secreting adrenocortical adenomas are associated with severe clinical consequences, whereas the prognosis of the rare adrenocortical cancer is rather poor in its advanced stages. The pathogenesis of these tumours is only partly elucidated. MicroRNAs are small, non-coding RNA molecules that are pivotal in the regulation of several basic cell biological processes via the posttranscriptional regulation of gene expression. Their altered expression has been described in many tumours. Several tissue microRNAs, such as miR-483-5p, miR-503, miR-210, miR-335 and miR-195 were found to be differentially expressed among benign and malignant adrenocortical tumours, and these could also have pathogenic relevance. Due to their tissue specific and stable expression, microRNAs can be exploited in diagnostics as well. As the histological diagnosis of adrenocortical malignancy is difficult, microRNAs might be of help in the establishment of malignancy. Novel data show that microRNAs are secreted in various body fluids, projecting their applicability as biomarkers as part of liquid biopsy. In this review, we attempt to present a synopsis on the pathogenic relevance of microRNAs in adrenocortical tumours and their potential diagnostic applicability. Orv Hetil. 2018; 159(7): 245–251.

scholarly journals The Serum Cell-Free microRNA Expression Profile in MCTD, SLE, SSc, and RA Patients

2020 ◽  
Vol 9 (1) ◽  
pp. 161 ◽  
Author(s):  
Barbara Stypinska ◽  
Anna Wajda ◽  
Ewa Walczuk ◽  
Marzena Olesinska ◽  
Aleksandra Lewandowska ◽  
...  
Keyword(s):  
Connective Tissue ◽  
Signaling Pathway ◽  
Expression Profile ◽  
Mirna Expression ◽  
Lupus Erythematosus ◽  
Connective Tissue Diseases ◽  
Mirna Expression Profile ◽  
Expression Level ◽  
Control Group ◽  
Mirna Expression Level

Mixed connective tissue disease (MCTD) is a rare disorder characterized by symptoms that overlap two or more Autoimmune Connective Tissue Diseases (ACTDs). The aim of this study was to determine whether miRNAs participating in the TLRs signaling pathway could serve as biomarkers differentiating MCTD or other ACTD entities from a healthy control group and between groups of patients. Although the selected miRNA expression level was not significantly different between MCTD and control, we observed that miR-126 distinguishes MCTD patients from all other ACTD groups. The expression level of miRNAs was significantly higher in the serum of systemic lupus erythematosus (SLE) and rheumatoid arthritis (RA) patients compared to controls. The miR-145 and -181a levels distinguished RA from other ACDT patients. miR-155 was specific for SLE patients. MiR-132, miR-143, and miR-29a distinguished RA and SLE patients from the systemic sclerosis (SSc) group. Additionally, some clinical parameters were significantly related to the miRNA expression profile in the SLE group. SLE and RA are characterized by a specific serum expression profile of the microRNAs associated with the Toll-like receptors (TLRs) signaling pathway. The analysis showed that their level distinguishes these groups from the control and from other ACTD patients. The present study did not reveal a good biomarker for MCTD patients.

Control of Meristem Size

2019 ◽  
Vol 70 (1) ◽  
pp. 269-291 ◽  
Author(s):  
Munenori Kitagawa ◽  
David Jackson
Keyword(s):  
Pluripotent Stem Cells ◽  
Growth And Development ◽  
Fruit Size ◽  
Deep Understanding ◽  
Crop Productivity ◽  
Genetic Networks ◽  
Seed Number ◽  
Plant Growth And Development ◽  
Stem Cell Maintenance ◽  
Cell Maintenance

A fascinating feature of plant growth and development is that plants initiate organs continually throughout their lifespan. The ability to do this relies on specialized groups of pluripotent stem cells termed meristems, which allow for the elaboration of the shoot, root, and vascular systems. We now have a deep understanding of the genetic networks that control meristem initiation and stem cell maintenance, including the roles of receptors and their ligands, transcription factors, and integrated hormonal and chromatin control. This review describes these networks and discusses how this knowledge is being applied to improve crop productivity by increasing fruit size and seed number.

scholarly journals Woodchuck Hepatitis Virus Posttranscriptional Regulatory Element Enhances Expression of Transgenes Delivered by Retroviral Vectors

1999 ◽  
Vol 73 (4) ◽  
pp. 2886-2892 ◽  
Author(s):  
Romain Zufferey ◽  
John E. Donello ◽  
Didier Trono ◽  
Thomas J. Hope
Keyword(s):  
Posttranscriptional Regulation ◽  
Fluorescent Protein ◽  
Hepatitis Virus ◽  
Regulatory Element ◽  
Leukemia Virus ◽  
Regulation Of Gene Expression ◽  
Retroviral Vectors ◽  
Woodchuck Hepatitis Virus ◽  
Independent Manner ◽  
Posttranscriptional Regulatory Element

ABSTRACT The expression of genes delivered by retroviral vectors is often inefficient, a potential obstacle for their widespread use in human gene therapy. Here, we explored the possibility that the posttranscriptional regulatory element of woodchuck hepatitis virus (WPRE) might help resolve this problem. Insertion of the WPRE in the 3′ untranslated region of coding sequences carried by either oncoretroviral or lentiviral vectors substantially increased their levels of expression in a transgene-, promoter- and vector-independent manner. The WPRE thus increased either luciferase or green fluorescent protein production five- to eightfold, and effects of a comparable magnitude were observed with either the immediate-early cytomegalovirus or the herpesvirus thymidine kinase promoter and with both human immunodeficiency virus- and murine leukemia virus-based vectors. The WPRE exerted this influence only when placed in the sense orientation, consistent with its predicted posttranscriptional mechanism of action. These results demonstrate that the WPRE significantly improves the performance of retroviral vectors and emphasize that posttranscriptional regulation of gene expression should be taken into account in the design of gene delivery systems.

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