scholarly journals EVALUASI PERTUMBUHAN TANAMAN UJI KETURUNAN MERANTI MERAH (Shorea leprosula) UMUR 12 TAHUN DI AREAL IUPHHK-HA PT. ERNA DJULIAWATI KALIMANTAN TENGAH

2021 ◽  
Vol 11 (2) ◽  
Author(s):  
Abdurrani Muin
Keyword(s):  
Genetic Factors ◽  
Tree Height ◽  
Progeny Test ◽  
Test Plot ◽  
Genetic Progress ◽  
Intensive Silviculture ◽  
Significant Difference ◽  
Growth Variation ◽  
High Heritability ◽  
Shorea Leprosula

Red meranti (Shorea leprosula) is one of the superior plants in the application of intensive silviculture (SILIN). As a superior plant, PT. Erna Djuliawati has conducted a progeny test for S. leprosula in the IUPHHK-HA area in Central Kalimantan. The aim of this research was to determine the superior seedlot and genetic growth variation of the S. leprosula in the progeny test plot. The object studied was the 30 seedlots of S. leprosula plants in progeny test plot consists divided into 8 blocks, where each seedlot was 4 plants. The data collected consisted of diameter (cm), tree height (m) and percentage of tree life. The results showed that in the progeny test trial plot there were 5 seedlots with superior growth. The results of the analysis of variance on diameter, height and percentage showed a significant difference between the tested seedlots to the properties measured. High heritability values followed by wide genetic diversity indicate that the appearance of these characters is more determined by genetic factors. The value of moderate diameter genetic progress (8.6%) indicates that the diameter character is supported by genetic factors, so that it can facilitate the progress of selection.Keywords : Progeny test, Shorea leprosula, superior dan genetic variation. AbstrakMeranti merah (Shorea leprosula) merupakan salah satu jenis tanaman unggulan dalam penerapan Silvikultur Intensif (SILIN). Sebagai tanaman unggulan, PT. Erna Djuliawati telah melakukan uji keturuan S. leprosula dalam areal IUPHHK-HA di Kalimantan Tengah. Tujuan penelitian  ingin menentukan seedlot yang unggul dan variasi pertumbuhan genetik tanaman uji keturunan S. leprosula dalam plot uji keturunan. Objek yang diteliti adalah tanaman meranti merah dalam plot uji keturunan sebanyak  30 seedlot yang terbagi dalam 8 blok, dimana setiap seedlot  sebanyak 4 tanaman. Data yang dikumpulkan terdiri dari diameter (cm), tinggi pohon (m) dan pesentase hidup pohon. Hasil penelitian menunjukkan bahwa dalam plot uji coba keturunan terdapat 5 seedlot yang unggul pertumbuhannya. Hasil analisis keragaman (varians) terhadap diameter, tinggi dan persentase menunjukkan adanya perbedaan yang nyata di antara seedlot yang diuji terhadap sifat yang diukur. Nilai heritabilitas yang tinggi diikuti dengan keragaman genetik yang luas menunjukkan penampilan karakter tersebut lebih ditentukan oleh faktor genetik. Nilai kemajuan genetik diameter sedang (8,6 %) mengindikasikan karakter diameter tersebut didukung oleh faktor genetik, sehingga dapat memfasilitasi kemajuan seleksi.Kata kunci : Uji Keturunan, S. leprosula, unggul, dan variasi genetik.

scholarly journals The occurrence of insect pests on pedunculate oak tested on the Chrostowa II experimental plot

2011 ◽  
Vol 57 (No. 9) ◽  
pp. 384-393 ◽  
Author(s):  
J. Banach ◽  
K. Lenowiecki
Keyword(s):  
Genetic Factors ◽  
Insect Pests ◽  
Test Site ◽  
Pedunculate Oak ◽  
Test Plot ◽  
Family Diversity ◽  
The Family ◽  
Family Level ◽  
High Heritability ◽  
Forest District

The present paper is about the provenance and family diversity of insect occurrence on the offspring of 58 pedunculate oak (Quercus robur L.) trees representing 5 populations from the Polish range of species. Researches were conducted on the Chrostowa II test plot, located in the Brzesko Forest District (southern Poland). Differences in symptoms of trees inhabitation by Andricus kollari (Hartig, 1843) ♀♀, Andricus lignicolus (Hartig, 1840) ♀♀, Andricus foecundatrix (Hartig, 1840) ♀♀, Biorrhiza pallida (Olivier, 1791) ♀♂, Andricus inflator (Hartig, 1840) ♀♂, Andricus conglomeratus (Giraud, 1859) ♀♀, Andricus quercusradicis (Fabricius, 1798) ♀♀, and Lachnus roboris (Linnaeus, 1758) were evaluated. Approximately 45% of oaks grown at the test site were damaged. The majority of trees were inhabited by A. kollari (35.7%) while the lowest number of trees was inhabited by A. inflator, A. conglomeratus and A. quercusradicis (0.1%). Analysis of variance showed that certain species prefer the offspring of certain provenances. Also a high diversity among families within provenances was found. The effect of the family and provenance was statistically significant on oaks with galls caused by A. kollari, A. foecundatrix and B. pallida share. High heritability values were obtained for A. kollari on the population and family level (0.86 and 0.70 respectively) and for the rest of the species only on the provenance level. The presence of L. roboris was greatly influenced rather by environmental than genetic factors, also being characterized by low heritability values.  

scholarly journals Effects of habitat edges on vegetation structure and the vulnerable golden-brown mouse lemur (Microcebus ravelobensis) in northwestern Madagascar

BMC Ecology ◽  
2020 ◽  
Vol 20 (1) ◽  
Author(s):  
Bertrand Andriatsitohaina ◽  
Daniel Romero-Mujalli ◽  
Malcolm S. Ramsay ◽  
Frederik Kiene ◽  
Solofonirina Rasoloharijaona ◽  
...  
Keyword(s):  
Body Mass ◽  
Edge Effects ◽  
Vegetation Structure ◽  
Species Abundance ◽  
Tree Height ◽  
Logistic Function ◽  
Study Region ◽  
Large Trees ◽  
Significant Difference ◽  
Vegetation Parameters

Abstract Background Edge effects can influence species composition and community structure as a result of changes in microenvironment and edaphic variables. We investigated effects of habitat edges on vegetation structure, abundance and body mass of one vulnerable Microcebus species in northwestern Madagascar. We trapped mouse lemurs along four 1000-m transects (total of 2424 trap nights) that ran perpendicular to the forest edge. We installed 16 pairs of 20 m2 vegetation plots along each transect and measured nine vegetation parameters. To determine the responses of the vegetation and animals to an increasing distance to the edge, we tested the fit of four alternative mathematical functions (linear, power, logistic and unimodal) to the data and derived the depth of edge influence (DEI) for all parameters. Results Logistic and unimodal functions best explained edge responses of vegetation parameters, and the logistic function performed best for abundance and body mass of M. ravelobensis. The DEI varied between 50 m (no. of seedlings, no. of liana, dbh of large trees [dbh ≥ 10 cm]) and 460 m (tree height of large trees) for the vegetation parameters, whereas it was 340 m for M. ravelobensis abundance and 390 m for body mass, corresponding best to the DEI of small tree [dbh < 10 cm] density (360 m). Small trees were significantly taller and the density of seedlings was higher in the interior than in the edge habitat. However, there was no significant difference in M. ravelobensis abundance and body mass between interior and edge habitats, suggesting that M. ravelobensis did not show a strong edge response in the study region. Finally, regression analyses revealed three negative (species abundance and three vegetation parameters) and two positive relationships (body mass and two vegetation parameters), suggesting an impact of vegetation structure on M. ravelobensis which may be partly independent of edge effects. Conclusions A comparison of our results with previous findings reveals that edge effects are variable in space in a small nocturnal primate from Madagascar. Such an ecological plasticity could be extremely relevant for mitigating species responses to habitat loss and anthropogenic disturbances.

scholarly journals Efektivitas Metode Seleksi Pedigree dan Modified Bulk pada Tiga Populasi Sorgum (Sorghum bicolor [L.] Moench)

2020 ◽  
Vol 47 (3) ◽  
pp. 275-282
Author(s):  
Dewi Andriani ◽  
Desta Wirnas ◽  
Dan Trikoesoemaningtyas
Keyword(s):  
Plant Height ◽  
Agronomic Traits ◽  
Test Results ◽  
Selection Methods ◽  
Coefficients Of Variation ◽  
Significant Difference ◽  
Pedigree Selection ◽  
High Heritability ◽  
Augmented Design ◽  
Materials Used

Sorghum has a growing popularity for food, feed, biofuel, and therefore needs to be developed. The research aimed to compare the effectiveness of pedigree and modified bulk selection methods for improving yield in three sorghum populations. The genetic materials used were 60 F6 lines from three populations, namely PI 10-90-A x Numbu, PI 150-20-A x Numbu and PI 150-20-A x Kawali which had been selected using pedigree and modified bulk methods. The experiment was conducted from October 2018 to February 2019 at the Cikabayan Experimental Station of IPB University, Dramaga, Bogor. The experiment was arranged in an augmented design with six checks, namely Kawali, Numbu, PI 10-90-A, PI 150-20-A, Samurai 1, and Samurai 2 which were replicated four times. Observations were made on agronomic traits and yield. Plant height and grain weight per panicle had high heritability and large genotypic coefficients of variation. The contrast test results showed significant differences between populations in plant height, panicle length, days of harvesting and 100-seed weight. On the other hand, no significant difference was observed among selection methods, indicating that both methods were equally effective for increasing sorghum yield. The pedigree selection and modified bulk selection increased grain yield per panicle by 14.1 g and 18.2 g respectively. Bulk of the best genotypes in early generation could be an alternative of bulk selection method. Keywords: contrast test, differential selection, genotypic coefficient of variation, heritability

scholarly journals ESTIMATION OF SOME GENETIC PRAMETERS IN DURUM WHEAT

2017 ◽  
Vol 48 (2) ◽  
Author(s):  
Almajidy & et al.
Keyword(s):  
Grain Yield ◽  
Durum Wheat ◽  
Harvest Index ◽  
Agricultural Research ◽  
Block Design ◽  
Selection Index ◽  
Research Station ◽  
Genetic Progress ◽  
Environmental Variance ◽  
High Heritability

To estimate genetic parameters and heritability in durum wheat (Triticum turgidum var. durum) genotypes, seventeen genotypes (16 exotic from ICARDA and local variety (Buhooth 7)) were included in this study. This experiment was conducted using a randomized complete block design with three replications at Field Crops Research Station, Abu-Graib, Office of Agricultural Research, during 2011-2012 and 2012-2013. The results revealed significant differences among genotypes for the studied characters at both seasons. The best genetic/environmental variance ratio attained for spike length (11.90) and no. of spikes. m-2 (9.22) in the first season, and grain yield (8.82) then harvest index (4.87) in the second season. High GCV observed for grain yield (15.68), no. of spikes. m-2 (15.18) in the first season, and harvest index (16.89) and grain yield (14.22) in the second season. High heritability estimates associated with high genetic advance for no. of spikes. m-2, in the first season. While, moderate h2bs estimates associated with high GA for same trait in the second season. Expected response to selection ranged from 0.93 to 84.6, also selection index ranged from 1.23 to 106.44 for grain yield and number of spikes. m-2, respectively in the first season also the same pattern was observed for value of second season. Characteristics like no. of spikes. m-2, plant height, no. of grains. Spike-1 and grain weight showed high heritability coupled with high genetic progress. Therefore, these characters should be given top priority during selection breeding in durum wheat.

Application and comparison of spatial models in analyzing tree-genetics field trials

1990 ◽  
Vol 20 (5) ◽  
pp. 536-546 ◽  
Author(s):  
Steen Magnussen
Keyword(s):  
Classical Model ◽  
Substantial Reduction ◽  
Spatial Models ◽  
Tree Height ◽  
Process Models ◽  
Spatial Process ◽  
Spatial Analyses ◽  
Spatial Covariance ◽  
Significant Difference ◽  
Tree Genetics

Tree height of jack pine full-sib families, originating from all possible combinations of three parental provenances and growing on three sites, was analyzed with 1 classical model and 11 nearest-neighbour spatial process models. Extension of the classical linear model with spatial interaction terms was deemed necessary in light of significant neighbourhood correlations among effect-free observations (residuals) on two of the three sites. The strength and extent of spatial and temporal correlations are demonstrated in both visual and tabular form. Only 4 of the 11 spatial models provided a substantial reduction (5–20%) in the significant difference between two estimates of full-sib family tree height. Spatial adjustments averaged 1–3% at the family level, with few families adjusted by more than 10%. The cumulative (temporal) effect of spatial covariance was demonstrated in rank correlations between adjusted and observed family means. No simple trends were obtained when adjusted variance components and heritabilities were compared with their unadjusted counter-parts, but most models tended to deflate genetic effects and reduce heritabilities. It is concluded that although spatial analyses provide an attractive tool for the experimenter, the lack of a cause and effect hypothesis in forest genetic trials necessitates model searching without the guarantee of true treatment effects. Spatial analysis provides good indicators of the need to collect additional site information for more powerful analyses. Careful planning and intensive site preparation may greatly reduce spatial covariances and the need for spatial analyses.

scholarly journals Twin studies for the investigation of the relationships between genetic factors and brain abnormalities in bipolar disorder

2016 ◽  
Vol 25 (6) ◽  
pp. 515-520 ◽  
Author(s):  
L. Squarcina ◽  
C. Fagnani ◽  
M. Bellani ◽  
C. A. Altamura ◽  
P. Brambilla
Keyword(s):  
Bipolar Disorder ◽  
Family Environment ◽  
Brain Structure ◽  
Genetic Factors ◽  
Genetic Research ◽  
Twin Studies ◽  
Neural Mechanisms ◽  
Shared Environment ◽  
High Heritability ◽  
The Relationship

The pathogenesis of bipolar disorder (BD) is to date not entirely clear. Classical genetic research showed that there is a contribution of genetic factors in BD, with high heritability. Twin studies, thanks to the fact that confounding factors as genetic background or family environment are shared, allow etiological inferences. In this work, we selected twin studies, which focus on the relationship between BD, genetic factors and brain structure, evaluated with magnetic resonance imaging. All the studies found differences in brain structure between BD patients and their co-twins, and also in respect to healthy controls. Genetic effects are predominant in white matter, except corpus callosum, while gray matter resulted more influenced by environment, or by the disease itself. All studies found no interactions between BD and shared environment between twins. Twin studies have been demonstrated to be useful in exploring BD pathogenesis and could be extremely effective at discriminating the neural mechanisms underlying BD.

Does Having Rotavirus Infection in Early Childhood Increase the Risk of Celiac Disease?

2021 ◽  
Author(s):  
Meryem Keceli Basaran ◽  
Caner Dogan ◽  
Mahmut Bal ◽  
Seda Geylani Gulec ◽  
Nafiye Urganci
Keyword(s):  
Risk Factors ◽  
Risk Factor ◽  
Celiac Disease ◽  
Genetic Factors ◽  
Pediatric Patients ◽  
Control Group ◽  
Rotavirus Infection ◽  
Rotavirus Gastroenteritis ◽  
Significant Difference ◽  
Espghan Guidelines

Abstract Objective With the increasing prevalence of celiac disease (CD) in the population, possible risk factors are under investigation. Environmental and genetic factors that trigger the immune response have been analyzed for many years. This study investigates the presence of CD in children with rotavirus infection. Rotavirus infection is thought to be a risk factor for CD. Methods Included in the study were 105 of 160 pediatric patients hospitalized due to symptomatic rotavirus infection between 2012 and 2018. These children were screened for CD 45.6 ± 18.2 (14–90) months following the rotavirus infection diagnosed with CD as per ESPGHAN guidelines. Results A total of 105 pediatric patients who had rotavirus gastroenteritis were included in the study. The age of the children with rotavirus infection was 3.98 ± 1 (2–6) months. In terms of CD, it was 45.6 ± 18.2 months. Around 14 to 90 months later, patients were called for control. CD developed in four (3.8%) of the children with rotavirus, whereas none of the children in the control group developed CD. Conclusion Rotavirus infection may be a risk factor for CD through immune mechanisms. There are genetic and various environmental factors for the development of CD. Although the CD's occurrence on children who had rotavirus gastroenteritis in our study also supported this situation, there was no statistically significant difference.

scholarly journals Long-term Growth Variation and Selection of Geographical Provenances of Cunninghamialanceolata (Lamb.) Hook

Forests ◽  
2019 ◽  
Vol 10 (10) ◽  
pp. 876 ◽  
Author(s):  
Wu ◽  
Duan ◽  
Zhang
Keyword(s):  
Genetic Improvement ◽  
Geographical Variation ◽  
Tree Height ◽  
Growth Patterns ◽  
Chinese Fir ◽  
Production Cycle ◽  
Growth Difference ◽  
Growth Variation ◽  
Selection Of

In order to understand the long-term growth variation of Chinese fir’s geographical provenances and promote long-term genetic improvement, the experimental provenance forest of Chinese fir planted in 1981 was taken as a research object.The provenances originated from southeastern China. The study measured each diameter at breast height (DBH) and tree height at 5, 6, 8, 12, and 33 years of age and analyzed the genetic variation of major growth traits of trees withdifferent provenances at different forest ages. Additionally, the study analyzed the geographical variation of Chinese fir by using the trend surface and principal component analysis (PCA) and evaluated the long-term selection effect of provenance by using juvenile–mature correlation and cluster analysis. The heritability of the DBH, treeheight, and volume of Chinese fir with different provenances reached 0.35–0.76, and with increasing forest age, the heritability of each trait showed a rising and gradually stabilizing trend. There were obvious differences in geographical variation patterns among the tested provenances, and both the DBH and the tree height growth patterns are two-way gradients. This variation pattern is associated with climatic conditions in different regions, and the factors limiting the growth difference of Chinese fir may be the mean temperature in winter and the precipitation in autumn and winter.An early selection age has a significant effect on shortening the timber production cycle of Chinese fir. The selection of trees aged between 6 and 12 years is more conducive to improving the efficiency of the genetic improvement of Chinese fir.The 42 excellent provenances selected from the 33-year-old mature Chinese fir forests have a larger increase in growth than trees with local provenances, which are concentrated in the Wuyi and Xuefeng mountains and are suitable for plantation in the Guangxi Zhuang Autonomous Region and surrounding areas.

scholarly journals ACTR-38. A SINGLE CENTER STUDY: LONG-TERM OUTCOMES OF COMBINED CHEMORADIATION THERAPY WITH TEMOZOLOMIDE FOR NEWLY DIAGNOSED GLIOBLASTOMA IN KOREAN PATIENT

2019 ◽  
Vol 21 (Supplement_6) ◽  
pp. vi21-vi21
Author(s):  
Kyeong-O Go ◽  
Ha Young Yang ◽  
Kihwan Hwang ◽  
Jung Ho Han ◽  
Hyoung Soo Choi ◽  
...  
Keyword(s):  
Radiation Therapy ◽  
Adjuvant Treatment ◽  
Genetic Factors ◽  
Newly Diagnosed ◽  
Factors Affecting ◽  
Korean Patients ◽  
Significant Difference ◽  
Newly Diagnosed Glioblastoma

Abstract In newly diagnosed glioblastoma (GBM), Temozolomide (TMZ) during and after radiation therapy has become standard treatment. This study describes the long-term use and follow-up results of this therapy for GBM. From 2004 to 2013 in a single institute, 112 Korean patients with newly diagnosed GBM were analyzed retrospectively. The Kaplan-Meier method, the two-sided log-rank test and Cox’s regression analysis was used to determine survival and its affecting factors. The toxicities of TMZ were evaluated using CTCAE v5.0. During the median follow-up period of 18.8 months, median PFS and OS were 9.2 and 20.3 months, respectively. This better survival outcome than the Stupp’s original study might be probably a large treatment effect of a single institution, ethnicity, and associated genetic factors. The TMZ during radiation therapy was completed in 108 patients (96.4%) and TMZ after radiation therapy in 59 patients (52.7%). Eight patients presented with grade 3 or 4 hematologic toxic effects during the protocol. Sixty-six patients (58.9%) received salvage treatment because of the poor response to adjuvant treatment or progression of the disease who achieved completion of adjuvant treatment was shown significantly longer median OS (p= 0.007) and PFS (p< 0.001). Age (< 60 years), preoperative KPS score (≥ 90), the extent of resection (≥ 78% by volumetric measurement, gross total resection), and completion of the Stupp’s protocol were significant factors affecting better survival. Between the sexes, and ages over 65 years did not show any significant difference among their groups. With marginal significances, the mutated IDH-1 and the methylated MGMT promoter showed longer median PFS(p= 0.075 and 0.777, respectively) and OS (p= 0.085 and 0.131, respectively). TMZ during and after radiation therapy might be effective and safe for newly diagnosed Korean patients with GBM. Further studies about various clinical and genetic factors affecting better survival are mandatory.

scholarly journals Predicting Growing Stock Volume of Eucalyptus Plantations Using 3-D Point Clouds Derived from UAV Imagery and ALS Data

Forests ◽  
2019 ◽  
Vol 10 (10) ◽  
pp. 905 ◽  
Author(s):  
Guerra-Hernández ◽  
Cosenza ◽  
Cardil ◽  
Silva ◽  
Botequim ◽  
...  
Keyword(s):  
Laser Scanning ◽  
Basal Area ◽  
Remote Sensing Data ◽  
Tree Height ◽  
Point Clouds ◽  
Volume Estimation ◽  
P Value ◽  
Test Statistic ◽  
Individual Tree ◽  
Significant Difference

Estimating forest inventory variables is important in monitoring forest resources and mitigating climate change. In this respect, forest managers require flexible, non-destructive methods for estimating volume and biomass. High-resolution and low-cost remote sensing data are increasingly available to measure three-dimensional (3D) canopy structure and to model forest structural attributes. The main objective of this study was to evaluate and compare the individual tree volume estimates derived from high-density point clouds obtained from airborne laser scanning (ALS) and digital aerial photogrammetry (DAP) in Eucalyptus spp. plantations. Object-based image analysis (OBIA) techniques were applied for individual tree crown (ITC) delineation. The ITC algorithm applied correctly detected and delineated 199 trees from ALS-derived data, while 192 trees were correctly identified using DAP-based point clouds acquired from Unmanned Aerial Vehicles (UAV), representing accuracy levels of respectively 62% and 60%. Addressing volume modelling, non-linear regression fit based on individual tree height and individual crown area derived from the ITC provided the following results: Model Efficiency (Mef) = 0.43 and 0.46, Root Mean Square Error (RMSE) = 0.030 m3 and 0.026 m3, rRMSE = 20.31% and 19.97%, and an approximately unbiased results (0.025 m3 and 0.0004 m3) using DAP and ALS-based estimations, respectively. No significant difference was found between the observed value (field data) and volume estimation from ALS and DAP (p-value from t-test statistic = 0.99 and 0.98, respectively). The proposed approaches could also be used to estimate basal area or biomass stocks in Eucalyptus spp. plantations.

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