scholarly journals Isolation and identification of common fungal spp. from commercial broiler feeds available in market of Sylhet District, Bangladesh

2016 ◽  
Vol 4 (2) ◽  
pp. 38-41 ◽  
Author(s):  
MT Islam ◽  
MK Hossain ◽  
ATMM Elahi ◽  
M Purkayastha ◽  
MM Rahman

The present study was designed to investigate the mycological contamination of commercial broiler feeds used in poultry establishments in sylhet, Bangladesh. The feed samples of commercial broiler feed (Starter, Grower and Finisher) were collected from the different areas of Sylhet district. A total of 189 commercial broiler feed samples where 63 Starter, 63 Grower and 63 Finisher were collected from the different areas of local market in Sylhet. The selected areas were Kadamtali, Shibjong, Khadim, Kamal Bazar, Dakshin Surma, Fenchugonj. From the feed samples analyzed for the presence of fungal agents, 144 (76.2%) were found positive for one or more fungal species. Fungal isolates were found among 36 (57%) of the 63 Starter feed samples, 45 (71.4%) of the 63 Grower feed samples and 63 (100%) of the 63 Finisher feed samples. The fungal agents isolated from Broiler Starter Feeds, Aspergillus spp. 51 (70.8%) has the highest frequency of occurrence, followed by Fuserium spp. 12 (16.7%) and least is Rhizopus sp. 9(12.5%). Similarly, in case of Broiler Grower Feeds, Aspergillus spp. 66 (68.8%) has the highest frequency of occurrence, followed by Fuserium spp. 18 (18.7%) and least is Rhizopus sp. 12(12.5%). In case of Broiler Finisher Feeds, Aspergillus spp. 90 (69.8%) has the highest rate of occurrence followed by Fuserium spp. 24 (18.6%) and least is Rhizopus sp. 15 (11.6%) respectively.International Journal of Natural Sciences (2014), 4(2) 38-41

2021 ◽  
Vol 11 (3) ◽  
pp. 382-390
Author(s):  
Makwin Danladi Makut ◽  
Chioma Deborah Nzeduru ◽  
Ike Kenneth Ekeleme ◽  
Jibril Egwu Owuna ◽  
Obuneme Smart Obiekezeie

This investigation aimed at production of gluconic acid by fungal species isolated from soil in Keffi. Standard microbiological methods were employed for isolation and identification of the fungal isolates. The yields of gluconic acid produced by the different isolates of the fungi were determined using gas chromatograph and mass Spectrometry. The occurrence of fungi showed that Rhizopus oryzae was 100%, Aspergillus carneus was 75.0%, Aspergillus niger was 75.0% and Aspergillus terreus was 100% while Trichoderma viride was 25.0% and Fusarium moniliforme was 25.0%. The result further demonstrated that three species of the fungal isolates Aspergillus niger, Aspergillus carneus and Fusarium moniliforme were found to produce gluconic acid. Screening for gluconic acid production showed that Aspergillus carneus isolated from locations As1, Cs1 and Cs2, Aspergillus niger isolated from locations Bs1, Bs2 and Cs4 were able to produce gluconic acid. Result of effect of temperature, pH, substrate concentration and fermentation time on production of gluconic acid showed that Aspergillus niger Bs2 produced highest amount of gluconic acid at 28oC, similarly highest amount for gluconic acid produced by Aspergillus carneus As1 was at 28oC, whereas Fusarium moniliforme Bs4 produced highest at 30OC. pH 6.5 was found to the best optima pH for production of both gluconic acid for the fungi studied namely Aspergillus niger Bs2 and Aspergillus carneus As1 and Fusarium moniliforme Bs4 produced highest gluconic acid at pH 5.5. The substrate concentration showed highest production of gluconic acid was produced by Aspergillus niger Bs2 at substrate concentration of 25%. Aspergillus carneus As1 produced highest at substrate concentration of 20% and Fusarium moniliforme Bs4 produced highest at substrate concentration of 20%. The fermentation time showed highest production of gluconic acid by Aspergillus niger Bs2 and Aspergillus carneus As1 was after 144 hours whereas F. moniliforme Bs4 produced gluconic acid after 120hrs respectively. The fungi species isolated from soil in keffi revealed great ability in production of gluconic acid.


2020 ◽  
Vol 23 (2) ◽  
pp. 246-258
Author(s):  
Khadeeja A. Saido ◽  
Halben I. Mohammed ◽  
Raed A. Haleem

This study was conducted on different species of stored grains obtained from Duhok Province, Kurdistan Region, of Iraq to investigate the occurrence of seed borne fungi. Nine types of grains were collected and two methods were selected (agar plate method and blotter method) for fungal isolation. A total of 19 species assigned to 13 genera were identified. The high frequent genera were Aspergillus (4 species), Penicillium, Alternaria and Fusarium (2 species), while other genera include Rhizopus, Cladosporium, Stemphylium, Ulocladium, Humicola, Bipolaris, Curvularia Phoma and Rhizoctonia were represented only in a single species. The results showed a variation in the fungal species and contamination percentage according to the detection and incubation methods. The lowest occurrence percentage was detected in lentils seeds with only one genus represented by Penicillium spp., while the highest occurrence percentage was detected with Chickpea seeds represent by six genera. The most common fungal genera displayed by agar plate method in wheat and chickpea were Rhizoctonia sp. (34.1%) and Penicillium sp. (42.5%) respectively. The highest fungal detection by blotter method was recorded with barley seeds while the lowest was chickpea seeds. The most common fungal genera recorded by blotter method under room temperature after 7 days and 14 days was Penicillium spp, with a percent 100% from chickpea seeds followed by Aspergillus spp with percent of (66.7%, 47.6%) from barley and raisin seeds respectively. While the highest frequent fungus in seeds incubated at 25°C after 7 and 14 days was Aspergillus parasiticus (88.9%) from mash seeds and Rhizopus sp. (80.1%) from lima bean respectively. Blotter method considered an efficient and economically reliable method.


Author(s):  
J Aquarista Ingratubun ◽  
Frans G Ijong ◽  
Hens Onibala

Food fermentation is one of various food processing techniques that has sufficient benefits of nutrition values, and also contains lactic acid bacteria which potentially inhibit pathogenic bacteria, thus prolong shelf life of  products. Bakasang is a traditional fermented food from North Sulawesi since many years ago. Reported research of bakasang previously had described that lactic acid bacteria was the dominant isolates and therefore current research  aimed to isolate and identify the lactic acid bacteria which associated during fermentation day 1 and day 15, respectively. Raw materials used were 5 kg intestine and liver of skipjack brought from local market Bersehati Manado. The intestine and liver of skipjack were washed and smashed and mixed with 10% salt  and 5% rice  from weight of the samples and then filled into bottle to be fermented for 15 days. Every 3 days (1,3,6,9,12,15), the samples were collected and analyzed for total lactic acid bacteria by using Total Plate Count Method on de Mann Rogosa Sharpe Agar after incubation at 37°C for 24 h. The colonies  grown were transferred to Tryptic Soy Broth and followed by streaking them on Tryptic Soy Agar and the free growing colony on agar medium were isolated into slant agar which were used for biochemical test such as Gram’s staining, motility test, catalase test, oksidase test, H2S test, IMVIC test (Indole, Methyl Red, Voges Proskauer, Citrate) and carbohydrate fermentation. The results showed that Lactobacillus sp., Bacillus sp., Eubacterium sp., and Bifidobacterium sp. All these four bacteria were distributed from day 1 to day 15 of the fermentation process© Fermentasi bahan pangan merupakan salah satu dari sekian banyak teknik pengolahan makanan yang mempunyai banyak manfaat dari kualitas gizi, mengandung bakteri asam laktat sehingga menghambat bakteri patogen sehingga daya simpan lebih panjang. Bakasang merupakan makanan fermentasi tradisional masyarakat Sulawesi Utara yang sudah ada sejak lama. Penelitian yang telah dilakukan terhadap bakasang menghasilkan informasi bahwa terdapat bakteri asam laktat pada bakasang sehingga menjadi tujuan untuk mengisolasi dan identifikasi bakteri asam laktat selama proses fermentasi 1-15 hari. Bahan baku bakasang ialah jeroan (usus dan hati) ikan cakalang Katsuwonis pelamis sebanyak 5 kg yang diambil dari pasar Bersehati Manado. Sampel jeroan dibersihkan kemudian dihancurkan, ditambahkan garam 10% dan nasi 5% kemudian difermentasi selama 15 hari dengan mengambil tiap-tiap sampel setiap 1, 3, 6, 9, 12, dan 15 untuk dihitung jumlah bakteri asam laktat dengan menggunakkan metode Total Plate Count pada media de Mann Rogosa Sharpe Agar dan koloni yang tumbuh di tumbuhkan  kembali pada media Tryptic Soy Broth  dan digores kembali pada media Tryptic Soy Agar, koloni yang tumbuh digores pada media slant agar yang selanjutnya diidentifikasi bakteri asam laktat berdasarkan uji biokimia yaitu uji pewarnaan Gram, uji motility, uji katalase, uji oksidase, uji H2S dan uji IMVIC (Indole, MethylRed, Voges Proskauer, Citrate). Hasil menunjukkan bahwa selama proses fermentasi berlangsung terdapat 4 genera bakteri asam laktat sesuai yaitu Lactobacillus sp., Bacillus sp., Eubacterium sp., dan Bifidobacterium sp., ke 4 genera ini tersebar pada fermentasi hari 1 sampai hari ke 15©


2020 ◽  
Vol 21 (3) ◽  
pp. 61-66
Author(s):  
Ola Hashem ◽  
Viola Zaki ◽  
Rawia Adawy

Objective: To study the incidence and seasonal dynamics of different fungi affected freshwater fishes in Lake Manzala with molecular identification of the isolated fungi. Animals: 300 Nile tilapia (Oreochromis niloticus) and 300 catfish (Clarias gariepinus). Design: Descriptive study. Procedures: Random samples of Oreochromis niloticus (O. niloticus) and Clarias gariepinus (C. gariepinus) were collected from Manzala fish farms. Clinical and postmortem examination of fish was applied. Isolation and identification of different fungi were performed by conventional methods. Furthermore, the molecular characterization of isolated fungi was carried out. Results: C. gariepinus had a higher rate of infection with different fungal species than O. niloticus. Aspergillus spp. (Aspergillus niger and Aspergillus flavus) were the most fungal isolated from the examined fishes, followed by Penicillium spp. and Candida albicans. Aspergillus spp were detected in all seasons with a higher rate in summer and spring. A. flavus, A. niger, Penicillium spp. and C.albicans isolates were amplified from both C. gariepinus and O. niloticus at the specified molecular weight using PCR. Conclusion and clinical relevance: Fungal infection affected the fish showing different external and internal lesions, all species of Aspergillus were found in all seasons with a high rate in, hot seasons, summer and spring. The Prevalence of Penicillium and C. albicans were also reported. All fungal isolates were identified on the phenotypic and molecular bases.


2021 ◽  
Vol 20 (3) ◽  
pp. 325-339
Author(s):  
Frederick Witfeld ◽  
Dominik Begerow ◽  
Marco Alexandre Guerreiro

AbstractThermophilic, thermotolerant and heat-resistant fungi developed different physiological traits, enabling them to sustain or even flourish under elevated temperatures, which are life-hostile for most other eukaryotes. With the growing demand of heat-stable molecules in biotechnology and industry, the awareness of heat-adapted fungi as a promising source of respective enzymes and biomolecules is still increasing. The aim of this study was to test two different strategies for the efficient isolation and identification of distinctly heat-adapted fungi from easily accessible substrates and locations. Eight compost piles and ten soil sites were sampled in combination with different culture-dependent approaches to describe suitable strategies for the isolation and selection of thermophilous fungi. Additionally, an approach with a heat-shock treatment, but without elevated temperature incubation led to the isolation of heat-resistant mesophilic species. The cultures were identified based on morphology, DNA barcodes, and microsatellite fingerprinting. In total, 191 obtained isolates were assigned to 31 fungal species, from which half are truly thermophilic or thermotolerant, while the other half are heat-resistant fungi. A numerous amount of heat-adapted fungi was isolated from both compost and soil samples, indicating the suitability of the used approaches and that the richness and availability of those organisms in such environments are substantially high.


2021 ◽  
Author(s):  
Runlei Chang ◽  
Xiuyu Zhang ◽  
Hongli Si ◽  
Guoyan Zhao ◽  
Xiaowen Yuan ◽  
...  

Abstract Cryphalus piceae parasitizes various economically important conifers. Similar to other bark beetles, C. picea vectors an assortment of fungi and nematodes. Previously, several ophiostomatoid fungi were isolated from C. piceae in Poland and Japan. In the present study, we explored the diversity of ophiostomatoid fungi associated with C. piceae infesting pines in the Shandong Province of China. We isolated ophiostomatoid fungi from both galleries and beetles collected from our study sites. These fungal isolates were identified using both molecular and morphological data. Through this study, we recovered 176 isolates of ophiostomatoid fungi representing at least seven species. Ophiostoma ips was the most frequently isolated species. Analyses of molecular and morphological data indicated four of the ophiostomatoid fungal species recovered in this study were previously undescribed. Hereby, we described these species as Ceratocystiopsis yantaiensis sp. nov., C. weihaiensis sp. nov., Graphilbum translucens sp. nov. and Sporothrix villosa sp. nov. A majority of the ophiostomatoid fungi recovered in this study were novel species. This suggests that the forests in China harbour an assortment of undescribed ophiostomatoid fungi yet to be discovered.


2021 ◽  
Vol 6 (1) ◽  
pp. 91-98
Author(s):  
A. Bello ◽  
◽  
J. B. Ameh ◽  
D. A. Machido ◽  
A. I. Mohammed-Dabo

Laccases are oxidases with broad substrate specificity and ability to oxidize various phenolic and non-phenolic compounds. This study was carried out to isolate and characterizes laccase producing fungi from environment samples. Soil and decaying wood samples were collected from different locations within Ahmadu Bello University, Zaria Main campus. Suspensions of the samples (1 g in 10 mL sterile distilled water) were serially diluted, inoculated onto Potato Dextrose Agar (PDA) containing 0.01% Chloramphenicol and incubated for 7 days at 30oC.The fungal isolates were characterized macroscopically and microscopically with the aid of an atlas. The identified fungal isolates were screened for laccase production by inoculating onto PDA containing 0.02% Guaiacol, 1mM ABTS (2 2’-azino-bis (3-ethylbenzthiazoline-6-sulfonic acid) and 0.5% Tannic acid as indicator compounds and incubated at 250C for 7 days. The laccase producing isolates were confirmed molecularly by ITS rDNA sequence analysis using the FASTA algorithm with the Fungus database from the European Bioinformatics Institute (EBI).A total of 25 fungal species (11 from soil and 14 from decaying wood samples) were isolated. Two isolates from the soil origin identified as Curvularia lunata SSI7 (Accession No. QIE06317.1) and Fusarium clade VII SSI3 (Accession No. GQ505677) were found to produce laccase where Curvularia lunata SSI7 was able to oxidize all the indicator compounds used for the screening. Fusarium clade VII SSI3 was able to oxidize only 0.5% Tannic acid. Laccase producing Curvularia lunata and Fusarium clade VII were isolated from soil samples collected from ABU Zaria Main Campus. Keywords: laccase, fungi, soil, decaying wood


2012 ◽  
Vol 2 (1) ◽  
pp. 08-14 ◽  
Author(s):  
MZ Islam ◽  
K Monalisa ◽  
MM Hoque

This study was conducted to investigate the interaction of different concentration of pectin and its dissipation from processing to storage of strawberry (Fragaria ananassa) jam and jelly. The fruits were collected from local market of Sylhet, Bangladesh. The analysis showed juice contains acidity 1.14±0.01 %, total sugar 0.61±0.06 %, TSS 8.98±0.03 % and pulp restrain acidity 01.02±0.01 %, total sugar 5.04±0.06 %, and TSS 8.57±1.36 %. Jam and jelly were prepared with 0.5%, 1% and 1.5% pectin. Potassium metabisulphate (KMS) was added as preservative in a required quantity. Study showed pectin do not significantly interact with quality attributes of processed product. During six month of storage at ambient temperature (27°C to 34°C) no mentionable changes were found. But PH of the products (jam and jelly) was slightly increased. At six month red color of 0.5 % pectin containing jam slightly faded and cohesiveness of 1% and 0.5 % pectin containing jelly considerably changed. A taste panel consisting 10 panelists adjudged the acceptability of the samples. The consumer’s preferences were measured by statistical analysis. Among the samples, both jam and jelly made with 1.5% pectin was commended as best product by the panelists at p<0.05. DOI: http://dx.doi.org/10.3329/ijns.v2i1.10877 International Journal of Natural Sciences (2012), 2(1): 08-14


2007 ◽  
Vol 70 (10) ◽  
pp. 2251-2258 ◽  
Author(s):  
O. BUCHER ◽  
R. A. HOLLEY ◽  
R. AHMED ◽  
H. TABOR ◽  
C. NADON ◽  
...  

Raw, frozen chicken nuggets and strips have been identified as a significant risk factor in contracting foodborne salmonellosis. Cases of salmonellosis as a result of consuming partly cooked chicken nuggets may be due in part to Salmonella strains originating in broiler feed. This study was undertaken to determine the occurrence and characterize the strains of Salmonella contaminating chicken nuggets, strips, and pelleted feeds, in an attempt to demonstrate whether the same Salmonella strains present in broiler feed could be isolated from raw, frozen chicken nuggets and strips available for human consumption. Salmonellae were recovered using the Health Canada MFHPB-20 method for the isolation and identification of Salmonella from foods. Strains were characterized by serotyping, phage typing, antimicrobial resistance typing (R-typing), and by pulsed-field gel electrophoresis (PFGE). Salmonellae were isolated from 25-g samples in 27% (n = 92) of nugget and strip samples, 95% (n = 20) of chicken nugget meat samples, and from 9% (n = 111) of pelleted feed samples. Salmonella Heidelberg, Salmonella Enteritidis, and Salmonella Orion were the most commonly isolated serovars from chicken nuggets and strips, nugget and strip meat, and pelleted broiler feeds, respectively. Salmonella Enteritidis phage type (PT) 13a with PFGE pattern SENXAI.0006 and R-type sensitive as well as Salmonella Enteritidis PT13a with PFGE pattern SENXAI.0068 and R-type sensitive were isolated from pelleted feed, and chicken nugget and strip meat in two separate instances. Data showed that Salmonella strains isolated from broiler feed were indistinguishable from strains isolated from packaged raw, frozen chicken nuggets and strips. However, results did not rule out the possibility that breeding stock or contamination during processing may have contributed to chicken meat contamination by Salmonella.


2020 ◽  
Vol 24 (6) ◽  
pp. 1085-2020
Author(s):  
K.M. Adamu ◽  
H. Muhammad ◽  
S.U. Ahmad ◽  
M.M. Ahmad ◽  
A.M. Yakubu

Understudying the presence of bacteria and fungi population on freshwater fishes, provides the knowledge and understanding of their diversity and potential roles they may play in the health of the aquatic and terrestrial ecosystems. The present study was conducted to evaluate the diversity of bacteria and fungi species of identified fish samples from River Mijawal, Nasarawa State. The fishes were sampled from the only landing for three months (October to December, 2019) for this study. During the sampling periods, thirteen (13) different fish species were identified; they were  swabbed with sterilized swab stick from the skin surface for bacteria and fungi identification. The Dominant fish species were Tilapia zillii, Labeo senegalensis, Mormyrus rume and Mormyrus tapines. The total number of thirteen (13) bacterial and five (5) fungi species were isolated and  identified. Eight (8) of the bacteria isolates, were gram negative bacteria (Pseudomonas sp, Aeromonas sp, Serratia mercescenes, Proteus sp, Salmonella spp, Escherichia coli, Klebsiella sp, and Enterobacter sp.); whilst the other five (5) were gram positive bacteria (Bacillus sp, Micrococcus sp, Staphylococcus sp, Enterococcus sp and Listeria monocytogenes).The five isolated fungi species were Aspergillus niger, Rhizopus sp, Penicillium  sp, Trichoderma viridae and Geotrichum candidum. The frequency of occurrence of the isolated bacteria indicated that Staphylococcus sp had the highest frequency of occurrence (16.67%) while Serratia mercescens had the least occurrence (2.78%). The highest number of occurrence of the isolated fungi species was observed in Rhizopus sp while the least was recorded in Geotricum candidum. It was observed that Tilapia zillii and  Mormyrus rume had the most frequent bacteria and fungi isolates. It can therefore be deduced from the results that fish samples identified from River Mijawal has high bacteria and fungi diversity that may be pathogenic to man. The occurrence of these microbes may be attributed of human  and animal faeces in the River  Keywords: Freshwater fishes, Microbes, River Mijawal, Nasarawa  


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