scholarly journals The Yeast Atlas of Appalachia: Species and Phenotypic Diversity of Herbicide Resistance in Wild Yeast

Diversity ◽  
2020 ◽  
Vol 12 (4) ◽  
pp. 139 ◽  
Author(s):  
Jordan B. Barney ◽  
Matthew J. Winans ◽  
Catherine B. Blackwood ◽  
Amaury Pupo ◽  
Jennifer E.G. Gallagher
Keyword(s):  
Phenotypic Diversity ◽  
Glyphosate Resistance ◽  
Spontaneous Fermentation ◽  
Nontarget Organisms ◽  
Organic Farm ◽  
Plant Soil ◽  
Wild Yeast ◽  
One Year ◽  
Conventional Farm ◽  
Selection Of

Glyphosate and copper-based herbicides/fungicides affect non-target organisms, and these incidental exposures can impact microbial populations. In this study, glyphosate resistance was found in the historical collection of S. cerevisiae, which was collected over the last century, but only in yeast isolated after the introduction of glyphosate. Although herbicide application was not recorded, the highest glyphosate-resistant S. cerevisiae were isolated from agricultural sites. In an effort to assess glyphosate resistance and impact on non-target microorganisms, different yeast species were harvested from 15 areas with known herbicidal histories, including an organic farm, conventional farm, remediated coal mine, suburban locations, state park, and a national forest. Yeast representing 23 genera were isolated from 237 samples of plant, soil, spontaneous fermentation, nut, flower, fruit, feces, and tree material samples. Saccharomyces, Candida, Metschnikowia, Kluyveromyces, Hanseniaspora, and Pichia were other genera commonly found across our sampled environments. Managed areas had less species diversity, and at the brewery only Saccharomyces and Pichia were isolated. A conventional farm growing RoundUp Ready™ corn had the lowest phylogenetic diversity and the highest glyphosate resistance. The mine was sprayed with multiple herbicides including a commercial formulation of glyphosate; however, the S. cerevisiae did not have elevated glyphosate resistance. In contrast to the conventional farm, the mine was exposed to glyphosate only one year prior to sample isolation. Glyphosate resistance is an example of the anthropogenic selection of nontarget organisms.

scholarly journals The Yeast Atlas of Appalachia: Species and Phenotypic Diversity of Herbicide Resistance in Wild Yeast

2020 ◽  
Author(s):  
Jordan B. Barney ◽  
Matthew J. Winans ◽  
Catherine B. Blackwood ◽  
Amaruy Pupo ◽  
Jennifer E. G. Gallagher
Keyword(s):  
Phenotypic Diversity ◽  
Glyphosate Resistance ◽  
Spontaneous Fermentation ◽  
Nontarget Organisms ◽  
Organic Farm ◽  
Plant Soil ◽  
Wild Yeast ◽  
One Year ◽  
Conventional Farm ◽  
Selection Of

Saccharomyces cerevisiae are a phenotypically diverse species that adapt to a wide variety of environments by exploiting standing genetic diversity and selecting for advantageous mutations. Glyphosate and copper-based herbicides/ fungicides affect non-target organisms, these incidental exposures can impact microbial populations. In this study, glyphosate resistance was found in the historical collection of yeast which was collected over the last century, but only in yeast isolated after the introduction of glyphosate. The highest glyphosate-resistant yeasts were isolated from agricultural sites. However, herbicide application at these sites was not recorded. In an effort to assess glyphosate resistance and impact on non-target microorganisms, yeast were harvested from 15 areas with known herbicidal histories, including an organic farm, conventional farm, remediated coal mine, suburban locations, state park, and a national forest. Yeast representing 23 genera were isolated from 237 samples of plant, soil, spontaneous fermentation, nut, flower, fruit, feces, and tree material samples. Saccharomyces, Candida, Metschnikowia, Klyveromyces, Hanseniaspora, and Pichia were other genera commonly found across our sampled environments. Managed areas had less species diversity and at the brewery, only Saccharomyces and Pichia were isolated. A conventional farm growing RoundUp Ready™ corn had the lowest phylogenetic diversity and the highest glyphosate resistance. The mine was sprayed with multiple herbicides including a commercial formulation of glyphosate; however, the yeast did not have elevated glyphosate resistance. In contrast to the conventional farm, the mine was exposed to glyphosate only one year prior to sample isolation. Glyphosate resistance is an example of the anthropogenic selection of nontarget organisms.

Peculiarities of the juvenile period of the native Chechen genotypes of willow leaf pear (Pyrus salicifolia Pall.)

2020 ◽  
Vol 62 ◽  
pp. 32-38
Author(s):  
E. A. Dolmatov ◽  
R. B. Borzayev ◽  
A. N. Shaipov
Keyword(s):  
Chestnut Soil ◽  
Crop Breeding ◽  
Juvenile Period ◽  
Period 2 ◽  
Russian Research Institute ◽  
The Common ◽  
One Year ◽  
First Time ◽  
Selection Of ◽  
Creative Cooperation

The results of the study of the duration of the juvenile period of indigenous Chechen willow leaf pear genotypes (Pyrus salicifolia Pall.) are given in connection with the acceleration of the breeding process and the use of selected forms in pear breeding for high precocity. The studies were carried out in 2016-2019 at OOO “Orchards of Chechnya” in accordance with the Agreement on creative cooperation with the Russian Research Institute of Fruit Crop Breeding. The work was carried out in accordance with generally accepted programs and methods. The objects of the study were one-year and two-year-old pear seedlings obtained from sowing seeds of selected dwarf and low-growing local Chechen forms of willow pear (P. salicifolia Pall.), laying fruit buds on annual growths and seedlings of Caucasian pear (P. caucasica Fed.), 20 500 pcs. of each specie. The aim of the research was to study the potential of precocity of willow pear seedlings and to reveal of selected forms with the greatest degree of this trait. Stratified seeds were sown in the sowing department of the OOO “Orchards of Chechnya” production nursery in April, 2017. The seedlings were grown according to the common technology in dryland conditions on the plot with chestnut soil. The first fl owering of plants was noted in the spring, 2019. As a result of the research, for the first time on a large number of the experimental material it was found that in the off spring of the indigenous Chechen willow leaf pear genotypes, the selection of a little more than 2% of seedlings with a very short juvenile period (2 years) was possible. They are of great interest in accelerating the breeding process and in the selection of new pear varieties with high precocity. 20 willow leaf pear genotypes were selected for the further use in breeding for high precocity and as sources of the trait of short juvenile period.

scholarly journals Competitive Binding Investigations and Quantitation in Surface-Enhanced Raman Spectra of Binary Dye Mixtures

2017 ◽  
Vol 72 (1) ◽  
pp. 60-68 ◽  
Author(s):  
Mircea A. Comanescu ◽  
Cyril Muehlethaler ◽  
John R. Lombardi ◽  
Marco Leona ◽  
Thomas A. Kubic
Keyword(s):  
Spectral Characteristics ◽  
Synthesis Method ◽  
Nanoparticle Synthesis ◽  
Peak Height ◽  
Calibration Models ◽  
Surface Enhanced ◽  
Surface Enhanced Raman ◽  
Standard Calibration ◽  
One Year ◽  
Selection Of

This research presents a study in surface-enhanced Raman quantitation of dyes present in mixtures of alizarin and purpurin using standard calibration curves and Langmuir isotherm calibration models. Investigations of the nature of competitive adsorption onto silver nanoparticles by centrifugation indicates that both dyes in the mixture interact with the nanoparticles simultaneously, but only the stronger adsorbing one is seen to dominate the spectral characteristics. Calibration can be carried out by careful selection of peaks characteristic to each dye in the mixture. Comparisons of peak height and peak area calibrations reveal that peak heights, when selected by the maximum value and accounting for peak shifts, prove the better model for quantitation. It is also shown that the microwave nanoparticle synthesis method produces stable nanoparticles with a shelf-life of at least one year that give very little variation within and between uses.

scholarly journals Kleiber ratios and growth curves of African Black and Red Neck ostrich breeds and their crossbreeds

2021 ◽  
Vol 42 (6supl2) ◽  
pp. 4059-4072
Author(s):  
Marcos Paulo Gonçalves de Rezende ◽  
◽  
Paulo Luiz Souza Carneiro ◽  
Riccardo Moretti ◽  
Johnny Iglesias Mendes Araujo ◽  
...  
Keyword(s):  
Feed Efficiency ◽  
Growth Curves ◽  
Production Costs ◽  
Adult Weight ◽  
Kleiber Ratio ◽  
Final Weight ◽  
African Black ◽  
One Year ◽  
Lower Production ◽  
Selection Of

The selection of animals with lower production costs can be achieved by using feed efficiency and growth curve information. Kleiber ratio (KR) is an alternative option for discriminating against the animals that have the greatest weight gain about their final weight. Alternative feed efficiency and growth curves for ostriches of the African Black (AB) and Red Neck (RN) breeds and their crossbreeds (CB) were investigated using KR and Gompertz equation. Univariate and multivariate analyses were used. The highest adult weight was identified in the RN and CB. AB was more precocious than the RN and CB individuals. Only AB animals reached 75% of their mature weight at one year of age. At 180 days, AB showed better KR. AB was different from the others, mainly for KR at 90 days and 180 days. Considering multivariate analysis, AB animals were different from the others, regardless of sex, mainly for KR at 90 days and KR at 180 days. Other subgroups separated the animals by sex. In a market preferring animals of minor structure (smaller cuts) and greater precocity, it would be suitable to opt for AB. When animals with greater body structure (larger cuts) are desired, males RN and CR is the best option, however, it will be slaughtered with greater age and lower value for KR (may generate a bigger production cost ). It is possible to obtain animals with precocity and high KR, being well represented by the AB breed.

scholarly journals Schätzung des Prüfniveaus metabolischer Merkmale beim Glukose-Toleranz-Test (GTT) an Jungbullen

2003 ◽  
Vol 46 (2) ◽  
pp. 167-176 ◽  
Author(s):  
L. Panicke ◽  
E. Fischer ◽  
B. Fischer ◽  
R. Staufenbiel
Keyword(s):  
Glucose Tolerance ◽  
Glucose Tolerance Test ◽  
Post Partum ◽  
Tolerance Test ◽  
The Other ◽  
Metabolic Parameters ◽  
Breeding Value ◽  
One Year ◽  
Pedigree Breeding ◽  
Selection Of

Abstract. Title of the paper: Level estimation of metabolic parameters in the glucose tolerance test (GTT) of young bulls The metabolic parameters of the glucose tolerance test are suitable for an additional recommendation for the valuation of the breeding bulls before the start of the offspring’s test could be given. Very important is the level of glucose half live to the begin of lactation of the cows. The other limit is the hyperglycemias greater than 10 mmol/l (or 180 mg/dl) in the glucose level in the blood. The glucose half live measured nearly 48 minutes is comparable in the 8th week post partum in lactation of cows with the young bulls in the age one year. Their combination with the pedigree breeding value is leading to increase of information, that could be utilised to the selection of improper bulls if the present results were confirmed.

scholarly journals Selection of Saccharomyces cerevisiae Starter Strain for Merwah Wine

Fermentation ◽  
2020 ◽  
Vol 6 (2) ◽  
pp. 43
Author(s):  
Nadine Feghali ◽  
Angela Bianco ◽  
Giacomo Zara ◽  
Edouard Tabet ◽  
Chantal Ghanem ◽  
...  
Keyword(s):  
Saccharomyces Cerevisiae ◽  
Acetic Acid ◽  
Pilot Scale ◽  
Molecular Monitoring ◽  
Technological Parameters ◽  
Sensorial Analysis ◽  
Spontaneous Fermentation ◽  
Wine Production ◽  
Wild Yeasts ◽  
Selection Of

In order to select Saccharomyces cerevisiae starter strains for ‘‘Merwah’’ wine production, three strains (M.6.16, M.10.16, and M.4.17) previously isolated from ‘‘Merwah’’ must and characterized at the lab scale were tested in pilot-scale fermentation in a Lebanese winery during the 2019 vintage. The three inoculated musts were compared to that obtained with a spontaneous fermentation. During the fermentations, must samples were taken to evaluate the dominance of the inoculated strains, and at the end of fermentation, the obtained wines were subjected to chemical and sensorial characterization. Molecular monitoring by interdelta analysis revealed that only M.4.17 was able to complete the fermentation and dominate over the wild yeasts. Based on the analysis of principal technological parameters (i.e., residual sugar, fermentative vigor, sulfur production, and acetic acid) and sensorial analysis of the wines obtained, M.4.17 was selected as an adequate starter for the production of typical ‘‘Merwah’’ wine.

scholarly journals Resistance to Glyphosate in Populations of Digitaria insularis

2018 ◽  
Vol 36 ◽  
Author(s):  
N.V. COSTA ◽  
G. MORATELLI ◽  
S.D. FERREIRA ◽  
A.C. SALVALAGGIO ◽  
A.C.P. RODRIGUES-COSTA
Keyword(s):  
Experimental Design ◽  
Response Curve ◽  
Glyphosate Resistance ◽  
No Tillage ◽  
Agronomic Practices ◽  
Intensive Use ◽  
Tillage System ◽  
Moderate Resistance ◽  
Agricultural Areas ◽  
Selection Of

ABSTRACT: The intensive use of glyphosate can select resistant populations. This study aimed at evaluating the occurrence of glyphosate resistance in populations of D. insularis in agricultural areas. Three experiments were conducted in randomized block experimental design with four replications. The Resistance Degree (RD) was determined by a dose-response curve in the evaluated populations: Experiment 2012, São Camilo (R01 and R02) and Palotina (R03, R04 and S05-susceptible); Experiment 2013 Palotina (R06 and R12), Katueté/Paraguay (R07), Toledo (R08 and R10), Cascavel (R09), São Miguel do Iguaçu (R11), Dom Eliseu/Pará (S13-susceptible); Experiment 2015 Nova Aurora (R14), Iracema do Oeste (R15 and R16), Jesuitas (R17 and R18), Tupãssi (R19), Jotaesse (R20), Espigão Azul (R21) and Palmitopolis (S22- susceptible). In 2012, it was possible to confirm a moderate resistance (RD = 1.1 to 5.0) only in R03; and populations R01, R02 and R04 were highly resistant (RD>5.0). In 2013, populations R09, R10, R11 and R12 showed resistance, while R06, R07 and R08 were highly resistant. In 2015, the R14, R16, R18, R19 and R20 populations showed moderateresistance, and R15 and R18 were highly resistant. Only R21 was susceptible. It was found that 83% of producers use the no-tillage system, 100% use the succession soybean/corn with 90% transgenic varieties, 45% of producers cannot explain the procedure regulation/sprayer calibration. Around 62% use practices to prevent the selection of resistant biotypes. Resistance was confirmed in 89.5% of the populations. The adopted agronomic practices may explain these results.

scholarly journals The Dawn of the Age of Multi-Parent MAGIC Populations in Plant Breeding: Novel Powerful Next-Generation Resources for Genetic Analysis and Selection of Recombinant Elite Material

Biology ◽  
2020 ◽  
Vol 9 (8) ◽  
pp. 229 ◽  
Author(s):  
Andrea Arrones ◽  
Santiago Vilanova ◽  
Mariola Plazas ◽  
Giulio Mangino ◽  
Laura Pascual ◽  
...  
Keyword(s):  
Genetic Analysis ◽  
Plant Breeding ◽  
Complex Traits ◽  
Genetic Recombination ◽  
Phenotypic Diversity ◽  
Recombinant Inbred Lines ◽  
Plant Genetic Resources ◽  
Diallel Cross ◽  
Genetic Mosaic ◽  
Selection Of

The compelling need to increase global agricultural production requires new breeding approaches that facilitate exploiting the diversity available in the plant genetic resources. Multi-parent advanced generation inter-cross (MAGIC) populations are large sets of recombinant inbred lines (RILs) that are a genetic mosaic of multiple founder parents. MAGIC populations display emerging features over experimental bi-parental and germplasm populations in combining significant levels of genetic recombination, a lack of genetic structure, and high genetic and phenotypic diversity. The development of MAGIC populations can be performed using “funnel” or “diallel” cross-designs, which are of great relevance choosing appropriate parents and defining optimal population sizes. Significant advances in specific software development are facilitating the genetic analysis of the complex genetic constitutions of MAGIC populations. Despite the complexity and the resources required in their development, due to their potential and interest for breeding, the number of MAGIC populations available and under development is continuously growing, with 45 MAGIC populations in different crops being reported here. Though cereals are by far the crop group where more MAGIC populations have been developed, MAGIC populations have also started to become available in other crop groups. The results obtained so far demonstrate that MAGIC populations are a very powerful tool for the dissection of complex traits, as well as a resource for the selection of recombinant elite breeding material and cultivars. In addition, some new MAGIC approaches that can make significant contributions to breeding, such as the development of inter-specific MAGIC populations, the development of MAGIC-like populations in crops where pure lines are not available, and the establishment of strategies for the straightforward incorporation of MAGIC materials in breeding pipelines, have barely been explored. The evidence that is already available indicates that MAGIC populations will play a major role in the coming years in allowing for impressive gains in plant breeding for developing new generations of dramatically improved cultivars.

scholarly journals Variation in relapse frequency and the transmission potential of Plasmodium vivax malaria

2016 ◽  
Vol 283 (1827) ◽  
pp. 20160048 ◽  
Author(s):  
Michael T. White ◽  
George Shirreff ◽  
Stephan Karl ◽  
Azra C. Ghani ◽  
Ivo Mueller
Keyword(s):  
Plasmodium Vivax ◽  
Reproduction Number ◽  
Phenotypic Diversity ◽  
Substantial Variation ◽  
Seasonal Transmission ◽  
Transmission Potential ◽  
Plasmodium Vivax Malaria ◽  
Tropical Areas ◽  
First Relapse ◽  
Selection Of

There is substantial variation in the relapse frequency of Plasmodium vivax malaria, with fast-relapsing strains in tropical areas, and slow-relapsing strains in temperate areas with seasonal transmission. We hypothesize that much of the phenotypic diversity in P. vivax relapses arises from selection of relapse frequency to optimize transmission potential in a given environment, in a process similar to the virulence trade-off hypothesis. We develop mathematical models of P. vivax transmission and calculate the basic reproduction number R 0 to investigate how transmission potential varies with relapse frequency and seasonality. In tropical zones with year-round transmission, transmission potential is optimized at intermediate relapse frequencies of two to three months: slower-relapsing strains increase the opportunity for onward transmission to mosquitoes, but also increase the risk of being outcompeted by faster-relapsing strains. Seasonality is an important driver of relapse frequency for temperate strains, with the time to first relapse predicted to be six to nine months, coinciding with the duration between seasonal transmission peaks. We predict that there is a threshold degree of seasonality, below which fast-relapsing tropical strains are selected for, and above which slow-relapsing temperate strains dominate, providing an explanation for the observed global distribution of relapse phenotypes.

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