exosomal rnas
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Author(s):  
Pranay Narang ◽  
Morish Shah ◽  
Vladimir Beljanski
Keyword(s):  

Biomolecules ◽  
2021 ◽  
Vol 11 (11) ◽  
pp. 1691
Author(s):  
Oyeon Cho ◽  
Do-Wan Kim ◽  
Jae-Youn Cheong

This preliminary study aimed to screen non-coding RNAs (ncRNAs) from plasma exosomes as a new method for cervical cancer diagnosis. Differentially expressed RNAs were initially selected from among a group of 12 healthy individuals (normal group) and a pretreatment group of 30 patients with cervical cancer (cancer group). Then, we analyzed the association between an ncRNA-mRNA network and cancer using ingenuity pathway analysis after secondary selection according to the number and correlation of mRNAs (or ncRNAs) relative to changes in the expression of primarily selected ncRNAs (or mRNAs) before and after chemoradiotherapy. The number of RNAs selected from the initial RNAs was one from 13 miRNAs, four from 42 piRNAs, four from 28 lncRNAs, nine from 18 snoRNAs, 10 from 76 snRNAs, nine from 474 tRNAs, nine from 64 yRNAs, and five from 67 mRNAs. The combination of miRNA (miR-142-3p), mRNAs (CXCL5, KIF2A, RGS18, APL6IP5, and DAPP1), and snoRNAs (SNORD17, SCARNA12, SNORA6, SNORA12, SCRNA1, SNORD97, SNORD62, and SNORD38A) clearly distinguished the normal samples from the cancer group samples. We present a method for efficiently screening eight classes of RNAs isolated from exosomes for cervical cancer diagnosis using mRNAs (or ncRNAs) altered by chemoradiotherapy.


2021 ◽  
Author(s):  
Hui Gong ◽  
Chunxiang Kang ◽  
Fang Du ◽  
Shengtang Zhou

Abstract The relationship of Exosomal RNAs released within the bone marrow microenvironment and Prognosis of patients with multiple myeloma has not been thoroughly studied. This study aims to evaluate which exosomal RNAs can prompt the prognosis of patients with multiple myeloma. Exosomes were isolated from the bone marrow fluid of patients with good treatment effect or not. Then they were characterized by dynamic light scattering, transmission electron microscopy, and Western blot analysis. The isolated exosomes stimulate PRMI8226 cells, observe the migration ability and proliferation ability of PRMI8226 cells. Then we performed exosome miRNA sequencing, performed bioinformatics analysis of differential miRNAs, and evaluated several miRNAs that may affect the treatment effect. To determine the actual value of these miRNAs in clinical applications, we collected a collection of clinical samples for verification. We found that bone marrow-derived exosomes from patients with different therapeutic effects have different effects on PRMI8226 cells. Exosomes with a poor prognosis can promote the proliferation and migration of PRMI8226 cells, while exosomes with a good prognosis have no impact on PRMI8226 cells. The miRNA sequencing results showed differentially expressed miRNAs in exosomes from different sources. These differential miRNAs can be enriched in pathways related to cancer development. Validation in clinical specimens found that exosomal mir-124-3p are highly expressed in patients with poor therapeutic effects. This study suggested exosomal miRNA plays a vital role in the development and treatment of multiple myeloma. Some miRNAs that can promote tumor progression are highly expressed in bone marrow exosomes of patients with poor therapeutic effects, such as hsa-miR-124-3p, hsa-miR-451b, hsa-miR-509-3p. Among them, hsa-miR-124-3 is promising as a predictor of therapeutic effect.


2021 ◽  
Author(s):  
Emily E Bonacquisti ◽  
Scott W Ferguson ◽  
Natalie E Jasiewicz ◽  
Jinli Wang ◽  
Adam D Brown ◽  
...  

Small extracellular vesicles (sEVs), or exosomes, play important roles in physiological and pathological cellular communication. sEVs contain both short and long non-coding RNAs that regulate gene expression and epigenetic processes. Studying the intricacies of sEV function and RNA-based communication requires tools capable of labeling sEV RNA. Here we developed a novel genetically encodable reporter system for tracking sEV RNAs comprising an sEV-loading RNA sequence, termed the EXO-Code, fused to a fluorogenic RNA Mango aptamer for RNA imaging. This fusion construct allowed the visualization and tracking of RNA puncta and colocalization with markers of multivesicular bodies; imaging RNA puncta within sEVs; and quantification of sEVs. This technology represents a useful and versatile tool to interrogate the role of sEVs in cellular communication via RNA trafficking to sEVs, cellular sorting decisions, and sEV RNA cargo transfer to recipient cells.


2021 ◽  
Vol 21 (1) ◽  
Author(s):  
Zheng Zhao ◽  
Guiping Zhao ◽  
Shuyue Yang ◽  
Shengtao Zhu ◽  
Shutian Zhang ◽  
...  

AbstractExosomes are single-membrane, secreted organelles with a diameter of 30–200 nm, containing diverse bioactive constituents, including DNAs, RNAs, proteins, and lipids, with prominent molecular heterogeneity. Extensive studies indicate that exosomal RNAs (e.g., microRNAs, long non-coding RNAs, and circular RNAs) can interact with many types of cancers, associated with several hallmark features like tumor growth, metastasis, and resistance to therapy. Pancreatic cancer (PaCa) is among the most lethal cancers worldwide, emerging as the seventh foremost cause of cancer-related death in both sexes. Hence, revealing the specific pathogenesis and improving the clinical diagnosis and treatment process are urgently required. As the study of exosomes has become an active area of research, the functional connections between exosomes and PaCa have been deeply investigated. Among these, exosomal RNAs seem to play a significant role in the development, diagnosis, and treatment of PaCa. Exosomal RNAs delivery ultimately modulates the various features of PaCa, and many scholars have interpreted how exosomal RNAs contribute to the proliferation, angiogenesis, migration, invasion, metastasis, immune escape, and drug resistance in PaCa. Besides, recent studies emphasize that exosomal RNAs may serve as diagnostic and prognostic biomarkers or therapeutic targets for PaCa. In this review, we will introduce these recent insights focusing on the discoveries of the relationship between exosomal RNAs and PaCa, and the potentially diagnostic and therapeutic applications of exosomes in PaCa.


2021 ◽  
Vol 2021 ◽  
pp. 1-13
Author(s):  
Lin Ye ◽  
Hui Guo ◽  
Yuan Wang ◽  
Yun Peng ◽  
Yongxin Zhang ◽  
...  

Diabetic retinopathy (DR) is a frequently occurring microvascular complication induced by long-term hyperglycemia. Pericyte-endothelial cell crosstalk is critical for maintaining vascular homeostasis and remodeling; however, the molecular mechanism underlying that crosstalk remains unknown. In this study, we explored the crosstalk that occurs between endothelial cells and pericytes in response to diabetic retinopathy. Pericytes were stimulated with cobalt chloride (CoCl2) to activate the HIF pathway. Hypoxia-stimulated pericytes were cocultured with high glucose- (HG-) induced endotheliocytes. Cell viability was determined using the CCK-8 assay. Western blot studies were performed to detect the expression of proteins associated with apoptosis, hypoxia, and inflammation. ELISA assays were conducted to analyze the release of IL-1β and IL-18. We performed a circRNA microarray analysis of exosomal RNAs expressed under normoxic or hypoxic conditions. A FISH assay was performed to identify the location of circEhmt1 in pericytes. Chromatin immunoprecipitation (CHIP) was used to identify the specific DNA-binding site on the NFIA-NLRP3 complex. We found that pericyte survival was negatively correlated with the angiogenesis activity of endotheliocytes. We also found that hypoxia upregulated circEhmt1 expression in pericytes, and circEhmt1 could be transferred from pericytes to endotheliocytes via exosomes. Moreover, circEhmt1 overexpression protected endotheliocytes against HG-induced injury in vitro. Mechanistically, circEhmt1 was highly expressed in the nucleus of pericytes and could upregulate the levels of NFIA (a transcription factor) to suppress NLRP3-mediated inflammasome formation. Our study revealed a critical role for circEhmt1-mediated NFIA/NLRP3 signaling in retinal microvascular dysfunction and suggests that signaling pathway as a target for treating DR.


2021 ◽  
Vol 4 (3) ◽  
pp. 2806-2819
Author(s):  
Yunchen Yang ◽  
Eric Kannisto ◽  
Santosh K. Patnaik ◽  
Mary E. Reid ◽  
Lei Li ◽  
...  

2021 ◽  
Vol 11 ◽  
Author(s):  
Wenzhi Yang ◽  
Xudong Pan ◽  
Aijun Ma

Atherosclerosis is an inflammatory disease that can lead to cardiovascular disorders and stroke. In the atherosclerosis microenvironment, exosomes secreted from various cells, especially macrophage-derived exosomes, play an important role in cell–cell communication and cellular biological functions. In this article, we review previous studies on exosomal RNAs and discuss their potential value in atherosclerosis diagnosis and therapy. Based on our research, we concluded that macrophage exosomes have potential value in atherosclerosis diagnosis and therapy. However, there is a need for future studies to further investigate methods of exosome isolation and targeting.


2021 ◽  
Vol 144 ◽  
pp. 252-268
Author(s):  
Sreerenjini Lakshmi ◽  
Thomas A. Hughes ◽  
Sulochana Priya
Keyword(s):  

Genes ◽  
2021 ◽  
Vol 12 (1) ◽  
pp. 73
Author(s):  
Guiping Zhao ◽  
Anni Zhou ◽  
Xiao Li ◽  
Shengtao Zhu ◽  
Yongjun Wang ◽  
...  

Gastric cancer (GC) is one of the most common malignancies in the world. Exosomes, a subset of extracellular vesicles with an average diameter of 100 nm, contain and transfer a variety of functional macromolecules such as proteins, lipids, and nucleic acids. A large number of studies indicated that exosomes can play a significant role in the initiation and development of GC via facilitating intercellular communication between gastric cancer cells and microenvironment. Exosomal RNAs, one of the key functional cargos, are involved in the pathogenesis, development, and metastasis of GC. In addition, recent studies elucidated that exosomal RNAs may serve as diagnostic and prognostic biomarkers or therapeutic targets for GC. In this review, we summarized the function of exosomal RNA in the tumorigenesis, progression, diagnosis, and treatment of GC, which may further unveil the functions of exosome and promote the potentially diagnostic and therapeutic application of exosomes in GC.


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