Synthetic analogues of oxytocin: an approach to problems of hormone action

Synthetic organic chemistry has in recent years become a recognized participant in the study of hormone action. Although the synthetic approach is capable of yielding copious information about the relation between chemical structure and biological activity and thereby, in principle, it can aid in exploring the molecular basis of hormone action, the results obtained by this approach are by no means unambiguous. For one thing, the great conformational flexibility of peptide chains makes it difficult to estimate the overall effect of a change in chemical structure on the topochemistry of the molecule in that conformation which it adopts in its interaction with a particular receptor site. Furthermore, the complexity of biological systems capable of showing a response to the hormones or their analogues is such that this response cannot, as yet, be confidently interpreted in terms of molecular interactions. A generalized scheme of hormonal regulation in the intact organism is shown in figure 5; an exogenously introduced hormonal peptide will bypass the stages of biosynthesis and release (though it might conceivably operate feedback mechanisms where these exist), but its behaviour in each subsequent stage of the system will be affected by its chemical and physical properties. Any change in the structure of the peptide is therefore likely to modify its interactions at several or all of these stages and the change in overt response will represent the complex results of these modified interactions. To some extent the effect on the individual stages can be distinguished by working with biological preparations of varying complexity, from the whole organism to isolated tissues; but even the simplest tissue preparations are still biochemically very complicated systems in which the receptor molecules have yet to be identified. On the other hand, any stage of the whole process of hormonal regulation is a fair target for attempts to achieve modified biological properties by structural variations, and this paper will be concerned with illustrating these possibilities, using examples from our work on neurohypophysial hormone analogues.

2020 ◽  
Vol 3 (1) ◽  
pp. 107
Author(s):  
Assia Chebieb ◽  
Chewki Ziani-Cherif

Streptogramins are potent antibiotics against numerous highly resistant pathogens and therefore are used in last-resort human therapy. These antibiotics are formed of both A- and B-group compounds named pristinamycins that differ in their basic primary structures. Although pristinamycin IIB is among the most interesting antibiotics in this family, it presents numerous problems related to its chemical structure, such as instability at most pH levels, weak solubility in water, and resistance by bacteria. As a response to the need for developing new antimicrobial agents, we have designed a new analog of pristinamycin IIB, based most importantly on the introduction of fluorine atoms. We conjectured indeed that the introduced modifications may solve the above-mentioned problems exhibited by pristinamycin IIB. Our multistep synthetic approach relies on few key reactions, namely a Wittig reaction, a Grubbs reaction, and dihydroxy, -difluoro API (Advanced Pharmaceutical Intermediate) synthesis


2019 ◽  
Author(s):  
Leandro Oliveira Bortot ◽  
Zahedeh Bashardanesh ◽  
David van der Spoel

Biomolecular crowding affects the biophysical and biochemical behavior of macro- molecules when compared to the dilute environment present in experiments made with isolated proteins. Computational modeling and simulation are useful tools to study how crowding affects the structural dynamics and biological properties of macromolecules. As computational power increased, modeling and simulating large scale all-atom explicit solvent models of the prokaryote cytoplasm become possible. In this work, we build an atomistic model of the cytoplasm of Escherichia coli composed of 1.5 million atoms and submit it to a total of 3 μs of molecular dynamics simulations. The properties of biomolecules under crowding conditions are compared to those from simulations of the individual compounds under dilute conditions. The simulation model is found to be consistent with experimental data about the diffusion coefficient and stability of macromolecules under crowded conditions. In order to stimulate further work we provide a Python script and a set of files that enables other researchers to build their own E. coli cytoplasm models to address questions related to crowding.<br>


Marine Drugs ◽  
2019 ◽  
Vol 17 (12) ◽  
pp. 654 ◽  
Author(s):  
Ana Isabel Barbosa ◽  
Ana Joyce Coutinho ◽  
Sofia A. Costa Lima ◽  
Salette Reis

The use of marine-origin polysaccharides has increased in recent research because they are abundant, cheap, biocompatible, and biodegradable. These features motivate their application in nanotechnology as drug delivery systems; in tissue engineering, cancer therapy, or wound dressing; in biosensors; and even water treatment. Given the physicochemical and bioactive properties of fucoidan and chitosan, a wide range of nanostructures has been developed with these polysaccharides per se and in combination. This review provides an outline of these marine polysaccharides, including their sources, chemical structure, biological properties, and nanomedicine applications; their combination as nanoparticles with descriptions of the most commonly used production methods; and their physicochemical and biological properties applied to the design of nanoparticles to deliver several classes of compounds. A final section gives a brief overview of some biomedical applications of fucoidan and chitosan for tissue engineering and wound healing.


2008 ◽  
Vol 3 (10) ◽  
pp. 1934578X0800301 ◽  
Author(s):  
Maria I. Bilan ◽  
Anatolii I. Usov

Sulfated polysaccharides of brown algae (“fucoidans”) constitute a wide variety of biopolymers from simple sulfated fucans up to complex heteropolysaccharides composed of several neutral monosaccharides, uronic acid and sulfate. The increased interest in this class of polysaccharides is explained by their high and versatile biological activities, and hence, by their possible use in new drug design. Structural analysis of several fucoidans demonstrates that their biological properties are determined not only by charge density, but also by fine chemical structure, although distinct correlations between structure and biological activity cannot be formulated at present. The aim of this review is to describe the methods of structural analysis currently used in fucoidan chemistry, and to discuss some new information on the structures of fucoidans presented in recent publications.


Cells ◽  
2019 ◽  
Vol 8 (12) ◽  
pp. 1610 ◽  
Author(s):  
Rafal P. Piprek ◽  
Michal Kolasa ◽  
Dagmara Podkowa ◽  
Malgorzata Kloc ◽  
Jacek Z. Kubiak

Normal gonad development assures the fertility of the individual. The properly functioning gonads must contain a sufficient number of the viable germ cells, possess a correct architecture and tissue structure, and assure the proper hormonal regulation. This is achieved by the interplay between the germ cells and different types of somatic cells. N-cadherin coded by the Cdh2 gene plays a critical role in this interplay. To gain an insight into the role of N-cadherin in the development of mouse gonads, we used the Cre-loxP system to knock out N-cadherin separately in two cell lines: the SF1+ somatic cells and the OCT4+ germ cells. We observed that N-cadherin plays a key role in the survival of both female and male germ cells. However, the N-cadherin is not necessary for the differentiation of the Sertoli cells or the initiation of the formation of testis cords or ovigerous cords. In the later stages of gonad development, N-cadherin is important for the maintenance of testis cord structure and is required for the formation of steroidogenic cells. In the ovaries, N-cadherin is necessary for the formation of the ovarian follicles. These results indicate that N-cadherin plays a major role in gonad differentiation, structuralization, and function.


2017 ◽  
Vol 205 ◽  
pp. 517-536 ◽  
Author(s):  
S. Dick ◽  
S. E. J. Bell

To address the question of whether the SERS signals of ss-DNA are simply combinations of the signals from the individual bases that comprise the sequence, SERS spectra of unmodified ss-DNA sequences were obtained using a hydroxylamine-reduced Ag colloid aggregated with MgSO4. Initially, synthetic oligodeoxynucleotides with systematic structural variations were used to investigate the effect of adding single nucleobases to the 3′ terminus of 10-mer and 20-mer sequences. It was found that the resulting SERS difference spectra could be used to identify the added nucleobases since they closely matched reference spectra of the same nucleobase. Investigation of the variation in intensity of an adenine probe which was moved along a test sequence showed there was a small end effect where nucleobases near the 3′ terminus gave slightly larger signals but the effect was minor (30%). More significantly, in a sample set comprising 25-mer sequences where A, T or G nucleobases were substituted either near the centres of the sequences or the 5′ or 3′ ends, the SERS difference spectra only matched the expected form in approximately half the cases tested. This variation appeared to be due to changes in secondary structure induced by altering the sequences since uncoiling the sequences in a thermal pre-treatment step gave difference spectra which in all cases matched the expected form. Multivariate analysis of the set of substitution data showed that 99% of the variance could be accounted for in a model with just three factors whose loadings matched the spectra of the A, T, and G nucleobases and which contained no positional information. This suggests that aside from the differences in secondary structure which can be eliminated by thermal pre-treatment, the SERS spectra of the 25-mers studied here are simply the sum of their component parts. Although this means that SERS provides very little information on the primary sequence it should be excellent for the detection of post-transcription modifications to DNA which can occur at multiple positions along a given sequence.


The chemical findings of Schmid & Schwartz (1952) in experimental porphyria of rabbits induced by sedormid have been confirmed. Since sedormid is hypnotic, a group of related drugs has been tested to find one which might produce the chemical picture in animals without hypnosis. Such a drug is allyl- iso propyl-acetamide (A.I.A.). In this investigation, the constant chemical structure affecting porphyrin metabolism was found to be CH 2 =CH—CH 2 —CH R —CO—NH—. Some rabbits excrete large amounts of porphobilinogen and uroporphyrin when given either sedormid or A.I.A., others produce little. It is suggested that the cause of this difference is related to a variability of the individual rabbit liver to deal effectively with those drugs. Rabbits, intoxicated with either drug, became constipated, had poor appetite and lost weight. They did not become paralyzed, nor show any change in systolic blood pressure or in their haematological values. Two fowls, one also given a barbiturate, and nine rats wore intoxicated with allyl- iso propyl-acetamide. Although these animals excreted relatively high levels of porphobilinogen and porphyrins, they did not develop paralysis. The experimentally induced porphyria in animals is compared with hum an acute porphyria. The effects are described of reticulo-endothelial blockade, splenectomy and barbiturate administration on porphyria induced experimentally in rabbits. Experimental porphyria appears to be due to an overproduction of porphyrins, rather than to an under-utilization of porphyrin pigments. An atypical porphobilinogen reaction is described. It is present in the early stage of drug intoxication in rabbits and has also been noted in human acute porphyria at low levels of porphobilinogen excretion.


2012 ◽  
Vol 9 (3) ◽  
pp. 1431-1439 ◽  
Author(s):  
Esam A. El-hefian ◽  
Mohamed Mahmoud Nasef ◽  
Abdul Hamid Yahaya

Chitosan/agar (CS/AG) films were prepared by blending different proportions of chitosan and agar (considering chitosan as the main component) in solution forms. The chemical structure and the morphology of the obtained blended films were investigated using Fourier transform infrared (FTIR) and field emission scanning electron microscope (FESEM). It was revealed that chitosan and agar form a highly compatible blend and their films displayed homogenous and smooth surface properties compared to the individual pure components.


1964 ◽  
Vol 160 (979) ◽  
pp. 246-257 ◽  

Previously reported work in this series (Brown, Rimington & Sawyer 1963) produced evidence that icterogenic activity (i.a.) of the pentacyclic triterpene acids is based upon the presence of a β-equatorially orientated hydroxyl group at C (3), or a hydroxyl at C (24), and a 22β-angeloyloxy side chain in the molecule of the particular active compound. The second part of this work, dealing with certain structural variations in triterpenes of the oleanane, 24-noroleanane (hedragane) and ursane series, is reported in this paper. These variations involve i.a. esterification of the C (28) carboxyl, saturation of the 22β-angeloyl side chain or replacement of this by simple saturated aliphatic acids. Assays are recorded of a further thirteen of these compounds for icterogenic activity using the modified technique described in the second paper of this series (Brown et al . 1963). It has been concluded from this work that the icterogenicity of 3β- or 24β-hydroxy triterpene acids is undoubtedly associated with the 22β-angeloyloxy side chain. Removal of the esterifying group at C (22) or its replacement by a simple saturated fatty acid residue is followed by complete loss of activity. Esterification of the C (28) carboxyl produces a considerable decrease in icterogenic potency due, probably, to a decrease in solubility of the compound.


2019 ◽  
Author(s):  
Leandro Oliveira Bortot ◽  
Zahedeh Bashardanesh ◽  
David van der Spoel

Biomolecular crowding affects the biophysical and biochemical behavior of macro- molecules when compared to the dilute environment present in experiments made with isolated proteins. Computational modeling and simulation are useful tools to study how crowding affects the structural dynamics and biological properties of macromolecules. As computational power increased, modeling and simulating large scale all-atom explicit solvent models of the prokaryote cytoplasm become possible. In this work, we build an atomistic model of the cytoplasm of Escherichia coli composed of 1.5 million atoms and submit it to a total of 3 μs of molecular dynamics simulations. The properties of biomolecules under crowding conditions are compared to those from simulations of the individual compounds under dilute conditions. The simulation model is found to be consistent with experimental data about the diffusion coefficient and stability of macromolecules under crowded conditions. In order to stimulate further work we provide a Python script and a set of files that enables other researchers to build their own E. coli cytoplasm models to address questions related to crowding.<br>


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