scholarly journals Production and cross-feeding of nitrite within Prochlorococcus populations

2022 ◽  
Author(s):  
Paul M Berube ◽  
Tyler J O'Keefe ◽  
Anna N Rasmussen ◽  
Sallie W Chisholm
Keyword(s):  
Batch Culture ◽  
Exponential Growth ◽  
Photosynthetic Bacterium ◽  
High Light ◽  
Low Light ◽  
N Cycle ◽  
N Source ◽  
Production And Consumption ◽  
N Assimilation ◽  
Single Clade

Prochlorococcus is an abundant photosynthetic bacterium in the oligotrophic open ocean where nitrogen (N) often limits the growth of phytoplankton. Prochlorococcus has evolved into multiple phylogenetic clades of high-light (HL) adapted and low-light (LL) adapted cells. Within these clades, cells encode a variety of N assimilation traits that are differentially distributed among members of the population. Among these traits, nitrate (NO3-) assimilation is generally restricted to a few clades of high-light adapted cells (the HLI, HLII, and HLVI clades) and a single clade of low-light adapted cells (the LLI clade). Most, if not all, cells belonging to the LLI clade have the ability to assimilate nitrite (NO2-), with a subset of this clade capable of assimilating both NO3- and NO2-. Cells belonging to the LLI clade are maximally abundant at the top of the nitracline and near the primary NO2- maximum layer. In some ecosystems, this peak in NO2- concentration may be a consequence of incomplete assimilatory NO3- reduction by phytoplankton. This phenomenon is characterized by a bottleneck in the downstream half of the NO3- assimilation pathway and the concomitant accumulation and release of NO2- by phytoplankton cells. Given the association between LLI Prochlorococcus and the primary NO2- maximum layer, we hypothesized that some Prochlorococcus exhibit incomplete assimilatory NO3- reduction. To assess this, we monitored NO2- accumulation in batch culture for 3 Prochlorococcus strains (MIT0915, MIT0917, and SB) and 2 Synechococcus strains (WH8102 and WH7803) when grown on NO3- as the sole N source. Only MIT0917 and SB accumulated external NO2- during growth on NO3-. Approximately 20-30% of the NO3- transported into the cell by MIT0917 was released as NO2-, with the balance assimilated into biomass. We further observed that co-cultures using NO3- as the sole N source could be established for MIT0917 and a Prochlorococcus strain that can assimilate NO2- but not NO3-. In these co-cultures, the NO2- released by MIT0917 was efficiently consumed by its partner strain during balanced exponential growth. Our findings highlight the potential for emergent metabolic partnerships within Prochlorococcus populations that are mediated by the production and consumption of the N cycle intermediate, NO2-.

Changes in the Stoichiometry of Photosystem II Components as an Adaptive Response to High-Light and Low-Light Conditions during Growth

1986 ◽  
Vol 41 (5-6) ◽  
pp. 597-603 ◽  
Author(s):  
Aloysius Wild ◽  
Matthias Höpfner ◽  
Wolfgang Rühle ◽  
Michael Richter
Keyword(s):  
Photosystem Ii ◽  
Functional Organization ◽  
Photosynthetic Apparatus ◽  
High Light ◽  
Molar Ratio ◽  
Light Conditions ◽  
Low Light ◽  
Pigment System ◽  
Transport Chain ◽  
The One

The effect of different growth light intensities (60 W·m-2, 6 W·m-2) on the performance of the photosynthetic apparatus of mustard plants (Sinapis alba L.) was studied. A distinct decrease in photosystem II content per chlorophyll under low-light conditions compared to high-light conditions was found. For P-680 as well as for Oᴀ and Oв protein the molar ratio between high-light and low-light plants was 1.4 whereas the respective concentrations per chlorophyll showed some variations for P-680 and Oᴀ on the one and Oв protein on the other hand.In addition to the study of photosystem II components, the concentrations of PQ, Cyt f, and P-700 were measured. The light regime during growth had no effect on the amount of P-700 per chlorophyll but there were large differences with respect to PQ and Cyt f. The molar ratio for Cyt f and PQ between high- and low-light leaves was 2.2 and 1.9, respectively.Two models are proposed, showing the functional organization of the pigment system and the electron transport chain in thylakoids of high-light and low-light leaves of mustard plants.

scholarly journals Acinetobacter baylyi Starvation-Induced Genes Identified through Incubation in Long-Term Stationary Phase

2010 ◽  
Vol 76 (14) ◽  
pp. 4905-4908 ◽  
Author(s):  
C. Phoebe Lostroh ◽  
Bruce A. Voyles
Keyword(s):  
Gene Expression ◽  
Stationary Phase ◽  
Batch Culture ◽  
Exponential Growth ◽  
Hypothetical Proteins ◽  
Acinetobacter Baylyi ◽  
Metabolic Gene Expression ◽  
Induced Genes ◽  
Dna Maintenance

ABSTRACT Acinetobacter species encounter cycles of feast and famine in nature. We show that populations of A cinetobacter baylyi strain ADP1 remain dynamic for 6 weeks in batch culture. We created a library of lacZ reporters inserted into SalI sites in the genome and then isolated 30 genes with lacZ insertions whose expression was induced by starvation during long-term stationary phase compared with their expression during exponential growth. The genes encode metabolic, gene expression, DNA maintenance, envelope, and conserved hypothetical proteins.

scholarly journals Effects of alkalinity and salinity at low and high light intensity on hydrogen isotope fractionation of long-chain alkenones produced by <i>Emiliania huxleyi</i>

2017 ◽  
Vol 14 (24) ◽  
pp. 5693-5704 ◽  
Author(s):  
Gabriella M. Weiss ◽  
Eva Y. Pfannerstill ◽  
Stefan Schouten ◽  
Jaap S. Sinninghe Damsté ◽  
Marcel T. J. van der Meer
Keyword(s):  
Light Intensity ◽  
Environmental Conditions ◽  
Hydrogen Isotope ◽  
Isotope Fractionation ◽  
Emiliania Huxleyi ◽  
High Light Intensity ◽  
High Light ◽  
Light Conditions ◽  
Low Light ◽  
Long Chain

Abstract. Over the last decade, hydrogen isotopes of long-chain alkenones have been shown to be a promising proxy for reconstructing paleo sea surface salinity due to a strong hydrogen isotope fractionation response to salinity across different environmental conditions. However, to date, the decoupling of the effects of alkalinity and salinity, parameters that co-vary in the surface ocean, on hydrogen isotope fractionation of alkenones has not been assessed. Furthermore, as the alkenone-producing haptophyte, Emiliania huxleyi, is known to grow in large blooms under high light intensities, the effect of salinity on hydrogen isotope fractionation under these high irradiances is important to constrain before using δDC37 to reconstruct paleosalinity. Batch cultures of the marine haptophyte E. huxleyi strain CCMP 1516 were grown to investigate the hydrogen isotope fractionation response to salinity at high light intensity and independently assess the effects of salinity and alkalinity under low-light conditions. Our results suggest that alkalinity does not significantly influence hydrogen isotope fractionation of alkenones, but salinity does have a strong effect. Additionally, no significant difference was observed between the fractionation responses to salinity recorded in alkenones grown under both high- and low-light conditions. Comparison with previous studies suggests that the fractionation response to salinity in culture is similar under different environmental conditions, strengthening the use of hydrogen isotope fractionation as a paleosalinity proxy.

scholarly journals Physiological responses of two tropical weeds to shade: I. Growth and biomass allocation

1999 ◽  
Vol 34 (6) ◽  
pp. 944-952 ◽  
Author(s):  
Moacyr Bernardino Dias-Filho
Keyword(s):  
Leaf Area ◽  
Weed Management ◽  
Dry Mass ◽  
High Light ◽  
Low Light ◽  
Light Regimes ◽  
Leaf Dry Mass ◽  
Lower Ability ◽  
Total Plant ◽  
Plant Dry Mass

Ipomoea asarifolia (Desr.) Roem. & Schultz (Convolvulaceae) and Stachytarpheta cayennensis (Rich) Vahl. (Verbenaceae), two weeds found in pastures and crop areas in Brazilian Amazonia, were grown in controlled environment cabinets under high (800-1000 µmol m-² s-¹) and low (200-350 µmol m-² s-¹) light regimes during a 40-day period. For both species leaf dry mass and leaf area per total plant dry mass, and leaf area per leaf dry mass were higher for low-light plants, whereas root mass per total plant dry mass was higher for high-light plants. High-light S. cayennensis allocated significantly more biomass to reproductive tissue than low-light plants, suggesting a probably lower ability of this species to maintain itself under shaded conditions. Relative growth rate (RGR) in I. asarifolia was initially higher for high-light grown plants and after 20 days started decreasing, becoming similar to low-light plants at the last two harvests (at 30 and 40 days). In S. cayennensis, RGR was also higher for high-light plants; however, this trend was not significant at the first and last harvest dates (10 and 40 days). These results are discussed in relation to their ecological and weed management implications.

scholarly journals Nighttime Temperatures and Sunlight Intensities Interact to Influence Anthocyanin Biosynthesis and Photooxidative Sunburn in “Fuji” Apple

2021 ◽  
Vol 12 ◽  
Author(s):  
Xiaomin Xue ◽  
Ying Duan ◽  
Jinzheng Wang ◽  
Fengwang Ma ◽  
Pengmin Li
Keyword(s):  
Light Intensity ◽  
Low Temperatures ◽  
Anthocyanin Biosynthesis ◽  
High Light ◽  
Anthocyanin Accumulation ◽  
Low Light ◽  
Low Light Intensity ◽  
Apple Peel ◽  
Fuji Apple ◽  
Nighttime Temperatures

Light and low temperatures induce anthocyanin accumulation, but intense sunlight causes photooxidative sunburn. Nonetheless, there have been few studies of anthocyanin synthesis under different sunlight intensities and low nighttime temperatures. Here, low nighttime temperatures followed by low light intensity were associated with greater anthocyanin accumulation and the expression of anthocyanin biosynthesis genes in “Fuji” apple peel. UDP-glucose flavonoid-3-O-glucosyltransferase (UFGT) activity was positively associated with anthocyanin enrichment. Ascorbic acid can be used as an electron donor of APX to scavenge H2O2 in plants, which makes it play an important role in oxidative defense. Exogenous ascorbate altered the anthocyanin accumulation and reduced the occurrence of high light–induced photooxidative sunburn by removing hydrogen peroxide from the peel. Overall, low light intensity was beneficial for the accumulation of anthocyanin and did not cause photooxidative sunburn, whereas natural light had the opposite effect on the apple peel at low nighttime temperatures. This study provides an insight into the mechanisms by which low temperatures induce apple coloration and high light intensity causes photooxidative sunburn.

scholarly journals Light intensity regulates phototaxis, foraging and righting behaviors of the sea urchin Strongylocentrotus intermedius

PeerJ ◽  
2019 ◽  
Vol 7 ◽  
pp. e8001 ◽  
Author(s):  
Jiangnan Sun ◽  
Xiaomei Chi ◽  
Mingfang Yang ◽  
Jingyun Ding ◽  
Dongtao Shi ◽  
...  
Keyword(s):  
Light Intensity ◽  
Foraging Behavior ◽  
Sea Urchins ◽  
High Light Intensity ◽  
High Light ◽  
Strongylocentrotus Intermedius ◽  
Low Light ◽  
Low Light Intensity ◽  
Light Intensities ◽  
Significant Difference

Small sea urchins Strongylocentrotus intermedius (1–2 cm of test diameter) are exposed to different environments of light intensities after being reseeded to the sea bottom. With little information available about the behavioral responses of S. intermedius to different light intensities in the environment, we carried out an investigation on how S. intermedius is affected by three light intensity environments in terms of phototaxis, foraging and righting behaviors. They were no light (zero lx), low light intensity (24–209 lx) and high light intensity (252–2,280 lx). Light intensity had obvious different effects on phototaxis. In low light intensity, sea urchins moved more and spent significantly more time at the higher intensity (69–209 lx) (P = 0.046). S. intermedius in high light intensity, in contrast, spent significantly more time at lower intensity (252–690 lx) (P = 0.005). Unexpectedly, no significant difference of movement (average velocity and total distance covered) was found among the three light intensities (P > 0.05). Foraging behavior of S. intermedius was significantly different among the light intensities. In the no light environment, only three of ten S. intermedius found food within 7 min. In low light intensity, nine of 10 sea urchins showed successful foraging behavior to the food placed at 209 lx, which was significantly higher than the ratio of the number (two of 10) when food was placed at 24 lx (P = 0.005). In the high light intensity, in contrast, significantly less sea urchins (three of 10) found food placed at the higher light intensity (2,280 lx) compared with the lower light intensity (252 lx) (10/10, P = 0.003). Furthermore, S. intermedius showed significantly longer righting response time in the high light intensity compared with both no light (P = 0.001) and low light intensity (P = 0.031). No significant difference was found in righting behavior between no light and low light intensity (P = 0.892). The present study indicates that light intensity significantly affects phototaxis, foraging and righting behaviors of S. intermedius and that ~200 lx might be the appropriate light intensity for reseeding small S. intermedius.

Does Astaxanthin Protect Haematococcus against Light Damage?

1998 ◽  
Vol 53 (1-2) ◽  
pp. 93-100 ◽  
Author(s):  
Lu Fan ◽  
Avigad Vonshak ◽  
Aliza Zarka ◽  
Sammy Boussiba
Keyword(s):  
Light Intensity ◽  
Light Stress ◽  
Phosphate Starvation ◽  
High Light Intensity ◽  
High Irradiance ◽  
High Light ◽  
Protective Agent ◽  
Light Damage ◽  
Low Light ◽  
Very High

Abstract The photoprotective function of the ketocarotenoid astaxanthin in Haematococcus was questioned. When exposed to high irradiance and/or nutritional stress, green Haematococcus cells turned red due to accumulation of an immense quantity of the red pigment astaxanthin. Our results demonstrate that: 1) The addition of diphenylamine, an inhibitor of astaxanthin biosynthesis, causes cell death under high light intensity; 2) Red cells are susceptible to high light stress to the same extent or even higher then green ones upon exposure to a very high light intensity (4000 μmol photon m-2 s-1); 3) Addition of 1O2 generators (methylene blue, rose bengal) under noninductive conditions (low light of 100 (μmol photon m-2 s-1) induced astaxanthin accumulation. This can be reversed by an exogenous 1O2 quencher (histidine); 4) Histidine can prevent the accumulation of astaxanthin induced by phosphate starvation. We suggest that: 1) Astaxanthin is the result of the photoprotection process rather than the protective agent; 2) 1O2 is involved indirectly in astaxanthin accumulation process.

scholarly journals Transcriptome analysis of genes and pathways associated with metabolism in Scylla paramamosain under different light intensities during indoor overwintering

BMC Genomics ◽  
2020 ◽  
Vol 21 (1) ◽  
Author(s):  
Na Li ◽  
Junming Zhou ◽  
Huan Wang ◽  
Changkao Mu ◽  
Ce Shi ◽  
...  
Keyword(s):  
Energy Metabolism ◽  
Light Intensity ◽  
Differentially Expressed Genes ◽  
High Light ◽  
Differentially Expressed ◽  
Scylla Paramamosain ◽  
Strong Impact ◽  
Low Light ◽  
Light Intensities ◽  
Light Group

Abstract Background Scylla paramamosain is one of the commercially crucial marine crustaceans belonging to the genus Scylla, which is commonly distributed along the coasts of China, Vietnam, and Japan. Genomic and transcriptomic data are scarce for the mud crab. Light intensity is one of the ecological factors that affect S. paramamosain during indoor overwintering. To understand the energy metabolism mechanism adapted to light intensity, we analyzed the transcriptome of S. paramamosain hepatopancreas in response to different light intensities (0, 1.43, 40.31 μmol·m− 2·s− 1). Results A total of 5052 differentially expressed genes were identified in low light group (LL group, 3104 genes were up-regulated and 1948 genes were down-regulated). A total of 7403 differentially expressed genes were identified in high light group (HL group, 5262 genes were up-regulated and 2141 genes were down-regulated). S. paramamosain adapts to different light intensity environments through the regulation of amino acids, fatty acids, carbon and energy metabolism. Different light intensities had a strong impact on the energy generation of S. paramamosain by influencing oxygen consumption rate, aerobic respiration, glycolysis/gluconeogenesis pathway, the citrate cycle (TCA cycle) and fatty acid degradation. Conclusion Low light is more conducive to the survival of S. paramamosain, which needs to produce and consume relatively less energy to sustain physiological activities. In contrast, S. paramamosain produced more energy to adapt to the pressure of high light intensities. The findings of the study add to the knowledge of regulatory mechanisms related to S. paramamosain metabolism under different light intensities.

scholarly journals Control of Photosynthetic and High-Light-Responsive Genes by the Histidine Kinase DspA: Negative and Positive Regulation and Interactions between Signal Transduction Pathways

2004 ◽  
Vol 186 (12) ◽  
pp. 3882-3888 ◽  
Author(s):  
Hui-Yi Hsiao ◽  
Qingfang He ◽  
Lorraine G. van Waasbergen ◽  
Arthur R. Grossman
Keyword(s):  
Histidine Kinase ◽  
Constitutive Expression ◽  
Companion Paper ◽  
High Light ◽  
Photosynthetic Oxygen Evolution ◽  
Wild Type ◽  
Low Light ◽  
Photosynthetic Oxygen ◽  
Inducible Genes ◽  
Encoding Genes

ABSTRACT We have deleted a gene for a sensor histidine kinase, dspA (or hik33), in the cyanobacterium Synechocystis sp. strain PCC6803. In low and moderate light, the mutant grew slowly under photoautotrophic conditions, with a doubling time of ∼40 h, and had severely reduced photosynthetic oxygen evolution. When the mutant was maintained in low or moderate light in the presence of glucose, its growth rate was only somewhat lower than that of wild-type cells. However, the mutant was light sensitive and rapidly died in high light. Furthermore, levels of many transcripts encoding genes associated with photosynthesis were altered in the mutant relative to wild-type Synechocystis sp. strain PCC6803 both in low light and following exposure to high light. There was constitutive expression of several high-light-inducible genes, including hli, psbAIII, and gpx2; there was little increased accumulation of sodB mRNA in high light; and the cells failed to accumulate cpcBA and psaAB mRNAs in low light in the presence of glucose, although a normal decline in the levels of these mRNAs was observed during exposure to high light. These results suggest that DspA is involved in controlling sets of photosynthetic and high-light-responsive genes, either directly or indirectly. These and other results, some of which are presented in a companion paper (C.-J. Tu, J. Shrager, R. Burnap, B. L. Postier, and A. R. Grossman, J. Bacteriol. 186:3889-3902, 2004), suggest that DspA acts as a global regulator that helps coordinate cellular metabolism with growth limitations imposed by environmental conditions.

scholarly journals The Response Regulator RpaB Binds to the Upstream Element of Photosystem I Genes To Work for Positive Regulation under Low-Light Conditions in Synechocystis sp. Strain PCC 6803

2008 ◽  
Vol 191 (5) ◽  
pp. 1581-1586 ◽  
Author(s):  
Yurie Seino ◽  
Tomoko Takahashi ◽  
Yukako Hihara
Keyword(s):  
Photosystem I ◽  
Promoter Activity ◽  
Response Regulator ◽  
Core Promoter ◽  
High Light ◽  
Light Conditions ◽  
Low Light ◽  
Positive Regulation ◽  
Upstream Element ◽  
Pcc 6803

ABSTRACT The coordinated high-light response of genes encoding subunits of photosystem I (PSI) is achieved by the AT-rich region located just upstream of the core promoter in Synechocystis sp. strain PCC 6803. The upstream element enhances the basal promoter activity under low-light conditions, whereas this positive regulation is lost immediately after the shift to high-light conditions. In this study, we focused on a high-light regulatory 1 (HLR1) sequence included in the upstream element of every PSI gene examined. A gel mobility shift assay revealed that a response regulator RpaB binds to the HLR1 sequence in PSI promoters. Base substitution in the HLR1 sequence or decrease in copy number of the rpaB gene resulted in decrease in the promoter activity of PSI genes under low-light conditions. These observations suggest that RpaB acts as a transcriptional activator for PSI genes. It is likely that RpaB binds to the HLR1 sequence under low-light conditions and works for positive regulation of PSI genes and for negative regulation of high-light-inducible genes depending on the location of the HLR1 sequence within target promoters.

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