scholarly journals IDENTIFIKASI BAKTERI PATOGEN PENYEBAB PENYAKIT PURPLE SYNDROME PADA KARANG FUNGIA DI PULAU HARI SULAWESI TENGGARA

2019 ◽  
Vol 6 (2) ◽  
pp. 198
Author(s):  
Ratna Diyah Palupi ◽  
Baru Sadarun ◽  
Paiga Hanurin Sawonua

IDENTIFIKASI BAKTERI PATOGEN PENYEBAB PENYAKIT PURPLE SYNDROME PADA KARANG FUNGIA DI PULAU HARI SULAWESI TENGGARA Nowadays coral disease is one of the causes of damage to coral reefs in Indonesia. Causative agents were found for some types of coral disease. This study aims to identify the type of pathogenic bacteria that cause purple syndrome which attacks Fungia corals. The study was conducted using descriptive exploratory methods. Corals infected with purple syndrome were collected on Pulau Hari, Southeast Sulawesi, through scuba diving. Then, microbiological analysis was carried out which included isolation using the scatter method, purification using a scratch method, a challenge test (antagonistic), a Koch Postulate test, and DNA analysis of putative bacterial isolates. Results showed that 5 bacterial isolates lived in symbiosis with the corals infected with purple syndrome (PSMH1, PSMH2, PSMH3, PSMH4, and PSMH5). Based on the Koch postulate test, 2 bacterial isolates which were pathogenic were obtained, namely PSHM2 and PSHM4 isolates. These bacteria infected the test corals with the characteristics of coral skeleton damage and coral bleaching (dead). Based on biomolecular testing, the two isolates were members of Enterobacter cloacae with a 99% similarity level.Keywords: Coral disease; Enterobacter cloacae; Fungia coral; Hari island; Purple syndromeABSTRAKSaat ini penyakit karang menjadi salah satu penyebab kerusakan terumbu karang di Indonesia. Penyebab pembawa untuk beberapa jenis penyakit karang sudah ditemukan. Penelitian ini bertujuan untuk mengidentifikasi jenis bakteri patogen penyebab penyakit purple syndrome yang menyerang karang Fungia. Penelitian dilakukan menggunakan metode deskriptif eksploratif. Sampel karang yang terinfeksi purple syndrome diambil di Pulau Hari, Sulawesi Tenggara, melalui scuba diving. Selanjutnya, analisis mikrobiologi dilakukan yang meliputi isolasi menggunakan metode sebar, purifikasi menggunakan metode gores, uji tantang (antagonistik), uji Postulat Koch, dan analisa DNA isolat bakteri yang diduga bersifat patogen. Hasil penelitian menemukan 5 isolat bakteri yang bersimbiosis dengan karang yang terinfeksi penyakit purple syndrome (PSMH1, PSMH2, PSMH3, PSMH4, dan PSMH5). Berdasarkan uji postulat Koch, 2 isolat bakteri yang bersifat patogen didapatkan, yaitu isolat PSHM2 dan PSHM4. Bakteri tersebut menginfeksi karang uji dengan ciri kerusakan skeleton karang dan pemutihan karang (mati). Berdasarkan uji biomolekuler kedua isolat tersebut merupakan anggota Enterobacter cloacae dengan tingkat kemiripan 99%.

2021 ◽  
Vol 11 (1) ◽  
pp. 24
Author(s):  
Usep Suhendar ◽  
Siti Mahyuni ◽  
Sogandi Sogandi

The increase in infectious diseases caused by pathogenic bacteria impacts the increase in the incidence of pathogenic bacteria to antibiotics. This study aimed to find candidates for the endophytic bacterial isolates of kasturi mango, which have antibacterial potential. After being tested against the pathogenic bacteria, Bacterial isolates showed potential activity using the disc diffusion method. The observations of five endophytic bacterial isolates from the leaves of Kasturi mango, namely L1, L2, L3, L4, and L5, showed that L2 was the most potential compared to other isolates. The formation of a clear zone indicates the inhibitory activity. Molecular identification was carried out by PCR amplification on the 16S rRNA gene. Furthermore, the L2 isolate was identified as Enterobacter cloacae with a 99% sequence similarity. Subsequent tests on several bacteria, including S. mutans ATCC 31987, S. aureus ATCC 25323, E. coli ATCC 25922 and Shigella dysenteriae ATCC 13313. All isolates showed an inhibition zone in the five bacteria.Keywords: Endophyte, Kasturi Mango, AntibacterialABSTRAKIdentifikasi molekuler isolat bakteri endofit daun mangga Kasturi (Mangifera casturi Kosterm) dan analisis aktivitas antibakteriMeningkatnya angka kejadian penyakit menular yang diakibatkan oleh bakteri patogen berdampak pada meningkatknya kemampuan resistensi bakteri patogen terhadap antibiotik. Penelitian ini bertujuan untuk mendapatkan kandidat isolat bakteri endofit daun mangga kasturi yang memiliki aktivitas sebagai antibakteri. Isolat bakteri yang telah diujikan terhadap bakteri patogen Propionibacterium acnes menunjukkan aktivitas potensial dengan menggunakan metode difusi cakram. Hasil pengamatan dari lima isolat bakteri endofit dari daun mangga kasturi yaitu L1, L2, L3, L4, dan L5 menunjukan L2 yang paling potensial dibandingkan isolat yang lain. Aktivitas penghambatan ditunjukkan dengan terbentuknya zona bening. Identifikasi molekuler dilakukan dengan amplifikasi PCR pada gen 16S rRNA. Selanjutnya, isolat L2 diidentifikasi sebagai Enterobacter cloacae dengan kemiripan urutan 99%.  Pengujian berikutnya dilakukan terhadap beberapa bakteri diantaranya bakteri S. mutans ATCC 31987, S. aureus ATCC 25323, E. coli ATCC 25922 dan S. dysenteriae ATCC 13313. Semua isolat menujukkan adanya zona hambat pada kelima bakteri tersebut.Kata Kunci: Endofit, Mangga Kasturi, Antibakteri


2019 ◽  
Vol 20 (11) ◽  
Author(s):  
NEPTU ISLAMY RAHARJA ◽  
WIDANARNI ◽  
Aris Tri Wahyudi

Abstract. Raharja NI, Widanarni, Wahyudi AT. 2019. Marine sponge-associated bacteria as biocontrol agents of vibriosis on whiteleg shrimp caused by Vibrio parahaemolyticus. Biodiversitas 20: 3164-3169. Sponge-associated bacteria are commonly known as an excellent source of microbial's bioactive compounds attributed to biological properties, including antibacterial activity. In our previous study, 12 isolates from sponge Aaptos sp. and Hyrtios have been screened to have anti-Vibrio spp. activities in vitro. The objective of this study was to evaluate these bacterial isolates for controlling Vibrio parahaemolyticus infection in vivo, identify the most potential isolate, and analyze chemical composition of bacterial crude extract. As tested by pathogenicity assay on post-larvae of whiteleg shrimp stadia PL 10, all 12 isolates were not pathogenic bacteria as indicated by the survival rate of shrimps ranging from 80 ± 8.1 - 93 ± 4.7%. Conversely, more than 50% died after inoculated with pathogenic V. parahaemolyticus. Interestingly, all isolates could increase the survival rate of shrimps infected with V. parahaemolyticus (105 cells/mL) reach of 80 ± 0.8 - 91 ± 0.4%, nearly 40% higher than the positive control, as evaluated by challenge test. The best anti-Vibrio activity showed by D2.Z13 isolate which could improve the survival rate up to 91.11 ± 0.4%. 16S-rRNA-based identification showed that this isolate was closely related to Pseudomonas aeruginosa 1-4-b-9 strain. The extract derived from this isolate contained some major compounds such as 4,8-dihydroxy-2-2 (1’-hydroxyheptyl) and 1,2,4-oxadiazol which have been reported as antibacterial compounds. Our study indicates that these bacterial isolates could be developed as biocontrol agents of vibriosis in whiteleg shrimp.


2020 ◽  
Vol 2 (3) ◽  
pp. 257-266
Author(s):  
Lamtiur Rotua Silitonga ◽  
Nursyirwani Nursyirwani ◽  
Irwan Effendi

Litter from the weathering of dead mangrove stems and leaves contains a lot of starch which has potential to be degraded by amylolytic bacteria into simple compounds with the help of the amylase enzyme. Amylolytic bacteria are bacteria that hydrolyze starch into simpler compounds namely glucose with the help of the amylase enzyme. This study aims to 1) isolate, identify and test sensitivity of amylolytic bacterial isolates found at the Purnama Dumai Marine Station, 2) the ability of amylolytic bacterial isolates to inhibit the growth of pathogenic bacteria (Escherichia coli, Pseudomonas aeruginosa and Vibrio alginolyticus) and 3) to determine the of amylolytic bacterial species by 16S rRNA sequence analysis. The results showed 10 bacterial isolates (TR 2, TR 6, TR 7, TR 9, TR 11, TR 13, TR 15, TR 16, TR 18 and TR 20) were able to inhibit the growth of pathogenic bacteria (E.coli, P.aeruginosa and V.alginolyticus). The sensitivity test of isolate TR 20 against E.coli was categorized into weak with inhibition zone diameter of 4.65 mm. Sensitivity of isolate TR 6 against P.aeruginosa was categorized into medium with inhibition zone diameter of 5.22 mm. Then sensitivity of isolate TR 11 against V.algynolyticus was categorized into medium with inhibition zone diameter of 5.55 mm. DNA analysis using 16S rRNA method and BLAST analysis showed similarity of each isolate. Isolate TR 6 was similar to Bacillus paramycoides strain MCCC 1A04098, isolate TR 11 was in a group of Enterobacter cloacae strain ATCC 13047 and TR 20 was in a group of Vibrio harveyi strains of NBRC 15634.


2018 ◽  
Vol 63 (1) ◽  
Author(s):  
Delphine Girlich ◽  
Thierry Naas ◽  
Laurent Dortet

ABSTRACT The dissemination of carbapenemase-producing Enterobacteriaceae (CPE) has led to the increased use of colistin, which has resulted in the emergence of colistin-resistant Enterobacteriaceae worldwide. One of the most threatening scenarios is the dissemination of colistin resistance in CPE, particularly the plasmid-encoded resistance element MCR. Thus, it has now become mandatory to possess reliable media to screen for colistin-resistant Gram-negative bacterial isolates, especially Enterobacteriaceae. In this study, we evaluated the performances of the Superpolymyxin medium (ELITechGroup) and the ChromID Colistin R medium (bioMérieux) to screen for colistin-resistant Enterobacteriaceae from spiked rectal swabs. Stool samples were spiked with a total of 94 enterobacterial isolates (Escherichia coli, Klebsiella pneumoniae, Salmonella enterica, Enterobacter cloacae), including 53 colistin-resistant isolates. ESwabs (Copan Diagnostics) were then inoculated with those spiked fecal suspensions, and culture proceeded as recommended by both manufacturers. The sensitivity of detection of colistin-resistant Enterobacteriaceae was 86.8% (95% confidence interval [95% CI] = 74.0% to 94.0%) using both the Superpolymyxin medium and the ChromID Colistin R plates. Surprisingly, the isolates that were not detected were not the same for both media. The specificities were high for both media, at 97.9% (95% CI = 87.3% to 99.9%) for the Superpolymyxin medium and 100% (95% CI = 90.4% to 100%) for the ChromID Colistin R medium. Both commercially available media, ChromID Colistin R and Superpolymyxin, provide useful tools to screen for colistin-resistant Enterobacteriaceae from patient samples (rectal swabs) regardless of the level and mechanism of colistin resistance.


1970 ◽  
Vol 15 ◽  
pp. 181-184 ◽  
Author(s):  
Rowshatul Afza ◽  
M Afzal Hussain ◽  
Habiba Khatun ◽  
Sabina Yeasmin ◽  
Md Iqbal Hossain ◽  
...  

Among the fishery resources, swamps are very important for various fish species such as Oreochromis nilotica, Oreochromis mossambica, Anabas testudineus, Channa punctatus and Heteropneustes fossilis. Swamps require shorter time and small investment for fish culture (Rahman et al. 1998). However, diseases are major problems in fish production both in culture system and wild condition in Bangladesh (Rahman and Chowdhury 1996). Bacteria, especially Aeromonas sp. is one of the causative agents of fish diseases. Bangladesh is situated in the tropical zone. Temperature is one of the important factors which affect the growth of pathogenic bacteria (Ljungh and Wadstrom 1982). Aeromonas sobria increases and grows at 17- 25°C (Rahman and Chowdhury 1996). Aeromonas sp. is the causative agent of various kinds of ulcerative disease of fishes (Karunasagar and Sugumar 1995). Yesmin et al. (2004) and Chowdhury and Baqui (1997) reported that Aeromonas is a very common pathogen in carps and live fishes. Hossain et al. (2006) worked on the bacterial load, Pseudomonas aeruginosa and their artificial infection to Oreochromis niloticus. The present study was undertaken to investigate the bacterial load in swamp water and the pathogenicity of A. sobria in A. testudineus.   doi: 10.3329/jbs.v15i0.2162 J. bio-sci. 15: 181-184, 2007


2020 ◽  
Vol 10 (1) ◽  
pp. 1-4
Author(s):  
Omor Ahmed Chowdhury ◽  
Md Raihan Ahmed ◽  
Md Raihan Dipu ◽  
Md Aftab Uddin

The use of earphones has increased in recent times throughout the world especially among the different level of students such as school, college or university who have a higher tendency of sharing these among them. Unlike airline headsets, headphones and stethoscope ear-pieces, ear phones are often shared by multiple users and can be a potential medium for transmission of pathogens, which can give rise to various ear related infections. The objective of this study was to detect the pathogenic bacteria from the ear-phones used by the students of Stamford University Bangladesh. A total of 16 ear-phone swabs were collected by sterile cotton swabs. The swabs were inoculated onto blood agar and incubated aerobically overnight at 37oC. Microscopic observation and standard biochemical tests were performed to confirm the identification of all the bacterial isolates. Six presumptively identified Staphylococcus spp. (38%) were tested against six different types of antibiotics following Kirby-Bauer disk diffusion method. Isolates were found to be 84% resistant against Cotrimoxazole and demonstrated 100% sensitivity to Vancomycin and Ciprorofloxacin. The findings of this study suggest the users to disinfect their respective ear phones and not to exchange them as they may act as a potential source to transfer pathogenic and antibiotic resistant bacteria among the ear phone users. Stamford Journal of Microbiology, Vol.10 (1) 2020: 1-4


2018 ◽  
Vol 7 (3) ◽  
Author(s):  
Prianti Rahmawati Diah Wulandari Rousdy

The availability  of nutrients in chicken carcasses can cause chicken meat to be an excellent medium for the growth of pathogenic and non-pathogenic bacteria. This study aims to determine the characteristics of the bacterial genus in broiler chicken carcasses from supermarkets in Pontianak City. Based on the results of the study found 23 bacterial isolates in broiler chicken carcass samples from supermarkets in Pontianak City, which included members of the Aeromonas, Acetobacter, Alcaligenes, Amphibacillus, Bacillus, Brevibacterium, Camphylobacter, Carnobacterium, Erwinia,  Erysipelothrik, Eubacterium, Hafnia, Kluyvera, Klebsiella, Kurthia, Lactobacillus, Listeria, Proteus, Pseudomonas, Shigella, Sporolactobacillus, Serratia, and  Yersinia.


2020 ◽  
Vol 49 (4) ◽  
pp. 415-423
Author(s):  
B. Baráti-Deák ◽  
Cs. Mohácsi-Farkas ◽  
Á. Belák

Bacterial strains with inhibitory effect on Salmonella Hartford, Listeria monocytogenes, Yersinia enterocolitica, and Escherichia coli, respectively, were isolated. Out of the 64 bacteria originated from food processing environments, 20 could inhibit at least one of the tested pathogens, and it was proved that growth decline of the pathogenic bacteria was more remarkable by co-culturing than by using cell-free supernatants of the isolates. Seven different genera (Pseudomonas, Bacillus, Paenibacillus, Macrococcus, Staphylococcus, Serratia, and Rothia) reduced the pathogens’ growth during the time period of analysis, and the strongest inhibitory effect was observed after 24 h between 15 and 30 °C. Sensitivity of the tested human pathogenic bacteria against the inhibitory strains was distinct, as Y. enterocolitica could be inhibited by numerous isolates, while S. Hartford proved to be the most resistant. Our results reveal that the isolated bacteria or their excreted metabolites could hinder pathogen growth when used in sufficient quantities.


2018 ◽  
Vol 7 (2) ◽  
pp. 125-139
Author(s):  
Thais Nogueira Gonzaga ◽  
Dora Inés Kozusny-Andreani

Nesta pesquisa objetivou-se avaliar a viabilidade técnica da aplicação de ozônio como bactericida e fungicida em amostras de resíduos de serviços de saúde potencialmente infectantes. Foram determinados os     micro-organismos presentes nos resíduos gerados em um hospital particular. Para realização das análises microbiológicas e o tratamento com ozônio o material foi particulado e homogeneizado. As análises microbiológicas foram realizadas antes e após a ozonização.Para os testes de desinfecção foram retirados 10,0g de amostra que foi submetida à ozonização por 5, 10, 15, 20 e 25 minutos com doses de 140,0; 280,0; 420,0; 560,0 e 700,0mg L-1 de ozônio, respectivamente. Verificou-se presença de mesófilos totais, coliformes totais e termotolerantes, Escherichia coli, Pseudomonas aeruginosa, Proteus spp., Staphylococcus aureus, Staphylococcus spp, Candida albicans e Rhizopus spp. O ozônio foi eficiente para eliminação de todos os micro-organismos em 20 minutos; nos primeiros cinco minutos de exposição ao gás verificou-se redução superior a 98%.Palavras-chave: Bactérias patogênicas. Fungos. Ozonização. USING OZONE GAS FOR DISINFECTION OF SOLID WASTE FROM HEALTH CARE SERVICES ABSTRACT: The aim of this research was to evaluate the technical viability of the application of ozone as bactericide and fungicide in samples of potentially infectious health services residues. The microorganisms present in the waste generated in a private hospital were determined. The material was particulated and homogenized to perform the microbiological analysis and to undergo ozone treatment. Microbiological analysis was performed before and after ozonization. For the disinfection tests, 10.0g of sample were removed and submitted to ozonization for 5, 10, 15, 20 and 25 minutes with 140,0; 280,0; 420,0; 560,0 and 700,0mg doses of L-1 of ozone, respectively. It was verified the presence of total mesophiles, total and thermotolerant coliforms, Escherichia coli, Pseudomonas aeruginosa, Proteus spp., Staphylococcus aureus, Staphylococcus spp, Candida albicans and Rhizopus spp. Ozone was efficient while eliminating all microorganisms in 20 minutes; in the first five minutes of gas exposure, the reduction was greater than 98%.Keywords: Pathogenic bacteria. Fungi. Ozonization.


2007 ◽  
Vol 53 (7) ◽  
pp. 919-924 ◽  
Author(s):  
Kavitha Boinapally ◽  
Xiuping Jiang

The objective of this study was to assess and differentiate wild-caught South Carolina (SC) shrimps from imported shrimps on the basis of microbiological analysis. Seven wild-caught SC shrimp and 13 farm-raised imported shrimp samples were analyzed. Total plate counts from wild-caught shrimp samples ranged from 4.3 to 7.0 log10 CFU/g, whereas counts from imported shrimp samples ranged from 3.2 to 5.7 log10 CFU/g. There was no difference (P > 0.05) between total bacterial counts of wild-caught SC shrimp and farm-raised imported shrimp. However, the percentages of bacteria with reduced susceptibility towards ceftriaxone and tetracycline were higher (P < 0.05) for farm-raised shrimp than for wild-caught samples. Salmonella spp. detected only in one farm-raised sample was resistant to ampicillin, ceftriaxone, gentamicin, streptomycin, and trimethoprim. Vibrio vulnificus was detected in both wild-caught and farm-raised shrimp samples; however, only the isolate from farm-raised shrimp was resistant to nalidixic acid and trimethoprim. Escherichia coli detected in one wild-caught sample was resistant to ampicillin. Both Listeria spp. and Salmonella spp. were absent with wild-caught SC samples. Therefore, the presence of more ceftriaxone- and tetracycline-resistant bacteria and the observed antimicrobial resistance phenotypes of isolates from the imported shrimp may reflect the possible use of antibiotics in raising shrimp in those countries.


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