scholarly journals Selection of GmSWEET39 for oil and protein improvement in soybean

PLoS Genetics ◽  
2020 ◽  
Vol 16 (11) ◽  
pp. e1009114
Author(s):  
Hengyou Zhang ◽  
Wolfgang Goettel ◽  
Qijian Song ◽  
He Jiang ◽  
Zhenbin Hu ◽  
...  
Keyword(s):  
Seed Coat ◽  
Molecular Basis ◽  
Seed Quality ◽  
Soybean Protein ◽  
Wild Soybean ◽  
Soybean Seed ◽  
Pleiotropic Effect ◽  
Industrial Applications ◽  
Dual Function ◽  
Protein Accumulation

Soybean [Glycine max (L.) Merr.] was domesticated from wild soybean (G. soja Sieb. and Zucc.) and has been further improved as a dual-use seed crop to provide highly valuable oil and protein for food, feed, and industrial applications. However, the underlying genetic and molecular basis remains less understood. Having combined high-confidence bi-parental linkage mapping with high-resolution association analysis based on 631 whole sequenced genomes, we mapped major soybean protein and oil QTLs on chromosome15 to a sugar transporter gene (GmSWEET39). A two-nucleotide CC deletion truncating C-terminus of GmSWEET39 was strongly associated with high seed oil and low seed protein, suggesting its pleiotropic effect on protein and oil content. GmSWEET39 was predominantly expressed in parenchyma and integument of the seed coat, and likely regulates oil and protein accumulation by affecting sugar delivery from maternal seed coat to the filial embryo. We demonstrated that GmSWEET39 has a dual function for both oil and protein improvement and undergoes two different paths of artificial selection. A CC deletion (CC-) haplotype H1 has been intensively selected during domestication and extensively used in soybean improvement worldwide. H1 is fixed in North American soybean cultivars. The protein-favored (CC+) haplotype H3 still undergoes ongoing selection, reflecting its sustainable role for soybean protein improvement. The comprehensive knowledge on the molecular basis underlying the major QTL and GmSWEET39 haplotypes associated with soybean improvement would be valuable to design new strategies for soybean seed quality improvement using molecular breeding and biotechnological approaches.

scholarly journals Influence of lignin content in soybean seed coat on the incidence of the storage fungus Aspergillus flavus

2012 ◽  
Vol 34 (4) ◽  
pp. 541-548 ◽  
Author(s):  
Ísis Barreto Dantas ◽  
João Almir de Oliveira ◽  
Heloisa Oliveira dos Santos ◽  
Édila Vilela Resende Von Pinho ◽  
Sttela Dellyzete Veiga Franco da Rosa
Keyword(s):  
Electrical Conductivity ◽  
Aspergillus Flavus ◽  
Seed Coat ◽  
Seed Quality ◽  
Lignin Content ◽  
Soybean Seed ◽  
Storage Period ◽  
Seed Storage ◽  
Seed Health ◽  
Physiological Quality

Seed quality may be affected by several factors, including permeability, color, and lignin content in the seed coat. This study aimed at evaluating influence of lignin content in the tegument of seed samples of six different soybean cultivars, in which half of each sample was inoculated with the fungus Aspergillus flavus, on the physical and physiological quality, and on the seed health, during 180 days storage period, under cold chamber with controlled conditions of temperature and RH. For that, at each interval of 60 days, samples were removed, and the physiological quality of these seeds was assessed by means of moisture and lignin contents; and by tests of seed health, germination, and electrical conductivity. The moisture content of seeds remained constant during all storage period. In the seed health test, it was found that inoculation was efficient, once the minimum incidence of the fungus in the inoculated seeds was 85%. In the germination test, there was a trend of reduction on percentage germination with the increase in storage period. However, there was an increase on electrical conductivity of seeds assessed. It was concluded that there is no interference of the lignin content in the seed coat on the resistance to infection by the fungus Aspergillus flavus, even after seed storage for a period of 180 days.

scholarly journals Ragam Karakter Morfologi Kulit Biji Beberapa Genotipe Plasma Nutfah Kedelai

2016 ◽  
Vol 14 (1) ◽  
pp. 14
Author(s):  
Ayda Krisnawati ◽  
M. M. Adie
Keyword(s):  
Cluster Analysis ◽  
Seed Coat ◽  
Seed Quality ◽  
Soybean Seed ◽  
Morphological Characters ◽  
Soybean Germplasm ◽  
Randomized Design ◽  
Soybean Genotypes ◽  
Soybean Seed Coat ◽  
Coat Layer

<p>Identification of morphological characters of soybean seed coat can be beneficial for industrial purposes and also important to enhance the seed quality genetically. The aims of the experiment were to identify the seed coat morphology of several soybean germplasm and to group them based on their seed coat morphological character. A total of 25 Balitkabi’s soybean germplasm were identified in Laboratory of Plant Breeding, Balitkabi and Laboratory of Biology, Malang University, from June until August 2005. The completely randomized design was used with three replications. Parameter measured include the thickness of seed coat layer and rate of imbibition. Cluster analysis was used to determine the index similarity of 25 soybean germplasms based on seed coat characters included epidermis, hypodermis, and parenchyma. The results shows that epidermis, hypodermis and parenchyma layer have mean of 0.051 mm, 0.160 mm, and 0.152 m, respectively. Imbibition’s rate ranged from 0.29-0.54% per hour. Cluster analysis was successfully clustering soybean genotypes into five groups, i.e. group with thin hypodermis layer, thin parenchyma, thick parenchyma, thick epidermis and hypodermis, and thinner parenchyma.</p><p> </p><p><strong>Abstrak</strong></p><p>Identifikasi karakter morfologi kulit biji kedelai tidak hanya bermanfaat untuk industri, namun juga penting untuk peningkatan mutu benih secara genetik. Tujuan penelitian adalah mengidentifikasi morfologi kulit biji beberapa genotipe plasma nutfah kedelai dan mengelompokkan berdasarkan karakter morfologi kulit biji. Bahan penelitian adalah 25 genotipe plasma nutfah kedelai yang dikoleksi oleh Balitkabi. Penelitian dilaksanakan di Laboratorium Pemuliaan Balitkabi dan Laboratorium Biologi FMIPA Universitas Negeri Malang, pada bulan Juni-Agustus 2005. Penelitian menggunakan rancangan acak lengkap, dengan tiga ulangan. Pengamatan dilakukan terhadap ketebalan lapisan epidermis, hipodermis, parenkim, dan laju imbibisi. Sidik gerombol digunakan untuk menilai derajat kemiripan 25 genotipe kedelai berdasarkan karakter kulit biji (epidermis, hipodermis, dan parenkim). Hasil penelitian menunjukkan bahwa lapisan epidermis, hipodermis, dan parenkim 25 genotipe kedelai masing-masing mempunyai ketebalan ratarata 0,051 mm, 0,160 mm, dan 0,152 mm. Kecepatan imbibisi berkisar antara 0,29-0,54%/jam. Sidik gerombol berhasil mengelompokkan 25 genotipe kedelai menjadi lima kelompok, yaitu kelompok genotipe yang memiliki lapisan hipodermis tipis, lapisan parenkim tipis, lapisan parenkim tebal, lapisan epidermis, hipodermis tebal, dan genotipe dengan lapisan parenkim yang lebih tipis.</p>

scholarly journals Evaluation of lignin content of soybean seed coat stored in a controlled environment

2008 ◽  
Vol 30 (2) ◽  
pp. 220-223 ◽  
Author(s):  
Francisco Carlos Krzyzanowski ◽  
José de Barros Franca Neto ◽  
Jose Marcos Gontijo Mandarino ◽  
Milton Kaster
Keyword(s):  
Seed Coat ◽  
Seed Quality ◽  
Lignin Content ◽  
Soybean Seed ◽  
Prolonged Storage ◽  
Controlled Environment ◽  
Tropical Regions ◽  
Breeding Lines ◽  
Soybean Seed Coat ◽  
One Year

Breeding soybean for high seed quality is an important approach for developing cultivars for tropical regions, and the lignin content in the seed coat is one of the screening parameters for this trait. Considering that many breeding lines are evaluated in each growing season using the presently recommended method for lignin determination, a long period is required for the evaluation of the whole breeding program. This time limitation may influence lignin content assessment, if lignin is degraded during storage. This research reported was designed to determine whether lignin was degraded in the seed coat of soybean seed cultivars stored for one year in a controlled environment (10°C temperature and 50% air relative humidity). Seeds of 12 selected soybean cultivars that had a range in seed coat lignin content were evaluated. Seeds were hand harvested just after physiological maturity and evaluated for seed coat lignin content at harvest and after one year of storage in a cold room (10°C and 50% RH). The lignin content in seed coats differed significantly among cultivars in both analyses, but for both results the sequence of cultivar classification and the lignin content values of each cultivar did not change. A regression analysis of lignin content at harvest and after one year of storage indicated a direct relationship between both lignin determinations suggesting no differences between the lignin content of each cultivar due to prolonged storage (r² = 0.98***). This indicates that the lignin determination in the soybean seed coat can be performed over a long time period without any bias due to change in its content.

scholarly journals Effect of tear/crack on soybean (Glycine max) seed coat, physiological quality and pathology of the seed

2019 ◽  
pp. 988-994 ◽  
Author(s):  
Bruna Ribeiro Machado ◽  
Caio Cesar de Oliveira Pereira ◽  
Élida Priscila Bogéa Carvalho ◽  
Juliana Oliveira da Silva ◽  
Letícia Maria de Oliveira Mendes ◽  
...  
Keyword(s):  
Glycine Max ◽  
Seed Coat ◽  
Seed Quality ◽  
Soybean Seed ◽  
Storage Period ◽  
Moisture Damage ◽  
Pathological Effect ◽  
Randomized Design ◽  
Physiological Quality ◽  
The Impact

Seed coat tear is frequently occurs in some soybean cultivars. The impact of seed coat tear on seed physiology and sanitation is uncertain. Our objective was to analyze the physiological and pathological effect of tear on soybean (Glycine max) seed coat. The cultivars NS-8338-IPRO (with high incidence of tear) and NS-6906-IPRO (with low incidence of tear) were used. A tetrazolium test was used to assess the physiological quality of the seed coat before and after storage. The sanitary quality was assessed through the "Blotter Test". For each storage period, we evaluated seeds with 0% coat tear, up to 10%, and above 10%. The experiment was performed in a completely randomized design using the methodologies proposed by RAS. The coat tear on soybean seed positively contributed to the moisture damage affecting the inner part of the seed. Incidences of Fusarium sp. and Aspergillus sp. were frequently observed in torn seeds and in seeds without tear (around 9-10%) but did not interfere with seed quality. The appearance of coat tear on soybean seed is increased by moisture damage and do not serve as a gateway for the fungi to cause damage during seed emergence.

The Effect of Seed Source and Post-harvest Practices on Quality of Soybean (Glycine max) Seeds in Busia County

2020 ◽  
Vol 2 (1) ◽  
pp. 17-40
Author(s):  
Ochran M. K. ◽  
◽  
Narla R. D. ◽  
Muthomi J. W. ◽  
Ochuodho J. O. ◽  
...  
Keyword(s):  
Seed Coat ◽  
Seed Quality ◽  
Soybean Seed ◽  
Seed Source ◽  
Local Market ◽  
Soybean Seeds ◽  
Post Harvest ◽  
Production Practices ◽  
Handling Practices

Majority of farmers growing legumes use and recycle seeds from informal sources for the next crop. The quality of such seeds is unknown and usually leads to accumulation of pest, diseases and reduced yields. This study was carried out to determine production practices and quality of soybean seeds obtained from informal sources in Busia County. A survey was conducted to collect information on source of soybean seeds, production and post-harvest handling practices. Seed samples were collected from farmers, local market and agro-dealers. The seeds were evaluated for purity, seed coat damage, germination, vigour and fungal infection. Majority (48%) of farmers in Busia County used farm saved seeds, 29% and 23% used seeds from community based organizations and local markets, respectively. Most of the farmers (92%) used inappropriate threshing techniques like beating with sticks and about 80% of the farmers did not treat seed either before storage or during planting. Majority (68%) stored soybean for three months only. Seeds from informal sources had low purity, higher seed coat damage and infection as compared to certified seeds. The physical purity of seeds from the informal sources did not meet the recommended standard of 98% however their germination was comparable to 75% germination standard. Farmers therefore, should be advised to adopt use of certified seeds and appropriate handling techniques. Keywords: Soybean, seed source, seed quality, seed production practices

scholarly journals The Use of Electrostatic Field to Improve Soybean Seed Germination in Organic Production

Agronomy ◽  
2021 ◽  
Vol 11 (8) ◽  
pp. 1473
Author(s):  
Zlatica Mamlic ◽  
Ivana Maksimovic ◽  
Petar Canak ◽  
Goran Mamlic ◽  
Vojin Djukic ◽  
...  
Keyword(s):  
Seed Germination ◽  
Electrostatic Field ◽  
Seed Quality ◽  
18Th Century ◽  
Soybean Seed ◽  
Organic Production ◽  
Initial Growth ◽  
Physical Treatment ◽  
Soybean Seedlings ◽  
Dark Green

Soybean production in the system of organic agriculture is not very demanding, and this has been well documented both through experimental results and commercial production. However, one of the biggest problems in organic production is the lack of adequate pre-sowing treatments. Therefore, the aim of this study was to examine the effect of the electrostatic field. This is a physical treatment that was first used for seed treatment in the 18th century but has mostly been neglected since then. Seeds of five soybean genotypes with differently colored seed coats (yellow, green, dark green, brown, and black) were included in this study. The seeds were exposed to different values of direct current (DC) with the following voltages: 0 V (control), 3 V, 6 V, and 9 V, to which the seeds were exposed for 0 min (control), 1 min, and 3 min. After exposing the seeds to the electric field, the physiological properties of seeds and seedlings at the first stage of growth were evaluated. The results show that the effect of the electrostatic field on seed quality depends on the genotype, voltage, and exposure time. The application of DC can be a suitable method for improving seed germination and the initial growth of soybean seedlings. In addition, the results indicate that it is necessary to adjust the DC treatment (voltage and duration of exposure of seeds) to particular genotypes since inadequate treatments may reduce the quality of seeds.

scholarly journals Two β-glucuronosyltransferases involved in the biosynthesis of type II arabinogalactans function in mucilage polysaccharide matrix organization in Arabidopsis thaliana

2021 ◽  
Vol 21 (1) ◽  
Author(s):  
Oyeyemi O. Ajayi ◽  
Michael A. Held ◽  
Allan M. Showalter
Keyword(s):  
Arabidopsis Thaliana ◽  
Seed Size ◽  
Seed Coat ◽  
Glucuronic Acid ◽  
Industrial Applications ◽  
Crystalline Cellulose ◽  
Sugar Residue ◽  
Composition Analysis ◽  
Cellulose Content ◽  
Type Ii

Abstract Background Arabinogalactan-proteins (AGPs) are heavily glycosylated with type II arabinogalactan (AG) polysaccharides attached to hydroxyproline residues in their protein backbone. Type II AGs are necessary for plant growth and critically important for the establishment of normal cellular functions. Despite the importance of type II AGs in plant development, our understanding of the underlying role of these glycans/sugar residues in mucilage formation and seed coat epidermal cell development is poorly understood and far from complete. One such sugar residue is the glucuronic acid residues of AGPs that are transferred onto AGP glycans by the action of β-glucuronosyltransferase genes/enzymes. Results Here, we have characterized two β-glucuronosyltransferase genes, GLCAT14A and GLCAT14C, that are involved in the transfer of β-glucuronic acid (GlcA) to type II AGs. Using a reverse genetics approach, we observed that glcat14a-1 mutants displayed subtle alterations in mucilage pectin homogalacturonan (HG) compared to wild type (WT), while glcat14a-1glcat14c-1 mutants displayed much more severe mucilage phenotypes, including loss of adherent mucilage and significant alterations in cellulose ray formation and seed coat morphology. Monosaccharide composition analysis showed significant alterations in the sugar amounts of glcat14a-1glcat14c-1 mutants relative to WT in the adherent and non-adherent seed mucilage. Also, a reduction in total mucilage content was observed in glcat14a-1glcat14c-1 mutants relative to WT. In addition, glcat14a-1glcat14c-1 mutants showed defects in pectin formation, calcium content and the degree of pectin methyl-esterification (DM) as well as reductions in crystalline cellulose content and seed size. Conclusions These results raise important questions regarding cell wall polymer interactions and organization during mucilage formation. We propose that the enzymatic activities of GLCAT14A and GLCAT14C play partially redundant roles and are required for the organization of the mucilage matrix and seed size in Arabidopsis thaliana. This work brings us a step closer towards identifying potential gene targets for engineering plant cell walls for industrial applications.

scholarly journals Genetic diversity in soybean seed quality under different storage conditions

2017 ◽  
Vol 38 (1) ◽  
pp. 57
Author(s):  
Daniele Piano Rosa ◽  
Danúbia Aparecida Costa Nobre ◽  
Diego Santos Oliveira ◽  
Francisco Charles dos Santos Silva ◽  
André Ricardo Gomes Bezerra ◽  
...  
Keyword(s):  
Genetic Diversity ◽  
Seed Quality ◽  
Soybean Seed ◽  
High Standard ◽  
Storage Conditions ◽  
Seed Vigor ◽  
Soybean Cultivars ◽  
High Germination ◽  
Physiological Quality ◽  
Almost All

This study aimed to assess the effect of genetic diversity on physiological quality of soybean seeds stored in cold chamber and under environmental conditions. Ten cultivars were assessed in a randomized factorial design (2x10). Factor 1 corresponded to two storage conditions and factor 2 to ten soybean cultivars, with four replications. The evaluated variables were total germination (G%), first count of germination (F%), percentage of abnormal seedlings (AS%), germination speed index (GSI), water content (WC), electrical conductivity (EC), dry matter of seedlings (DMS) and length of seedlings (LS). Data underwent ANOVA, followed by Scott Knott test, as well as multivariate analysis of genetic diversity. The results showed a higher physiological quality for seeds under cold storage. Half of the cultivars (FPS Júpiter, FPS Urano, FPS Antares, FPS Netuno and CD 250) presented high germination rates and seed vigor, being thus indicated as high-standard materials for further breeding programs. Besides that, storage environment had influence on the clustering of soybean cultivars. Moreover, cultivars had genetic dissimilarity for almost all assessed traits as G%, GSI, F%, AS%, EC, DMS and LS.

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