An in silico approach towards exploration of the oxidative stress resistance of major withanolides of Withania somnifera in relation to COVID-19 management

Oxidative stress is the state of imbalance between the production of reactive oxygen species (free radicals) in the biological system and the ability of the body to detoxify them resulting in increased accumulation of free radicals in the cells. This stress leads to weakening of the immune system thus leading to higher susceptibility to other infections as well. This also includes the weakening of the respiratory tract leading to increased susceptibility of viral infections as in the case of COVID-19. Treatment for any kind of abnormality requires the identification of the key target proteins and pathways that are being altered. Withania somnifera is being used in the traditional medicinal system to improve health and longevity thus creating a sense of mental as well as physical well being. The present study utilises network pharmacological approach to predict the potential oxidative stress targets of the three major withanolides: withanolide A, withaferin A and withanone. Primarily, the targets of the individual withanolides were obtained from the Swiss target and DIGEP-pred databases and the GO terms and lead hits related to oxidative stress were retrieved from AMIGO2 database. Totally 40 correlative hits were obtained as anti stress targets of the withanolides, which were subjected to functional enrichment and protein–protein interaction analysis to study the enriched pathways underlying oxidative stress response. Further the eleven crucial targets of the four selected pathways were analysed using molecular docking analysis. A total of forty protein hits were obtained as oxidative stress targets of the withanolides. Further, the pathway enrichment of these forty target genes showed the AGE RAGE signalling pathway as highly enriched pathway. Therefore, the AGE RAGE signalling pathway along with its underlying pathways namely MAPK signalling pathway, FOXO pathway and PI3-AKT pathway were chosen among all the other enriched pathways. Further the molecular docking analysis of the eleven target proteins falling under these four pathways showed good docking scores of the withanolides with all the eleven targets with the highest interaction against BCL2. From the above study, the biological targets and associated pathways of the withanolides have been retrieved. Thus the in silico approach undertaken in this study explores the role of the key withanolides in the antioxidant potential of the traditional medicinal plant Withania somnifera.

Biodiversity of some fig cultivars in Southern Syria

This research has been conducted in the Biotechnology Laboratory in Damascus University_ Damascus, Syria where the genetic diversity of fourteen cultivars of figs (Ficus carica L.) growing in Swaida governorate which located in the south region of Syria were investigated using (Simple Sequence Repeats) SSRs technique, where 4 cultivars of them were genotypes scattered in the local fields without any scientific taxonomy and farmers did not classify them properly. Eight pairs of SSRs markers were used depend on their ability to separate between fig cultivars as mentioned in previous studies, six pairs of them gave amplified products in the polymerase chain reaction (PCR), while MFC3 and MFC6 primers did not give any amplification products. A total of 17 alleles were detected at six SSRs loci. The alleles number per locus ranged from 2 to 4 with an average of 2.83 alleles/locus. The observed heterozygosity (Ho) was 0.33, while the expected heterozygosity (He) was 0.17. The mean value of genetic similarity was 0.69 where fig cultivars has separated into two clusters in Cluster Analysis, which confirms a significant genetic similarity between most of the cultivars. MFC1 and MFC2 loci gave about 0.67 and 0.61 PIC (Polymorphism Information Content) values respectively, which confirms their ability to study the genetic diversity of fig cultivars more than other loci. F1 and F2 cultivars greatly affect the quality of the fruits as paternity traits as Caprifigs. Tammozi cultivar has low values of its genetic similarity with the rest of the cultivars which reflect great difference between it and other cultivars. Generally, the challenges in this study were in characterizing unrecognized fig cultivars in southern Syria to distinguish between them as they were not certified in agriculture ministry in Syria because the lack in studies related to the same topic as these cultivars were not studied before, thus, we managed to make a significant contribution in certifying fig cultivars in Syria using SSR technique.

Assessment of the antiproliferative potential of Cissampelos owariensis (P. Beauv) methanolic extract in Wistar rats

Cissampelos owariensis is a medicinal plant with a wide range of therapeutic uses. In this study, the objective was to further assess its antiproliferative potential using cell proliferation and tumor suppressor markers. Solvent extraction of C. owariensis leaves was done using methanol. Twenty (20) male albino Wistar rats were randomly divided into four groups 1–4 (n=5) and respectively administered with methanolic extracts of C. owariensis at 0, 100, 300 and 500 mg/kg for 30 days. After treatment, the hepatic tissues were processed and examined histologically and immunohistochemically for cell proliferation (Ki-67) and tumor suppressor (p53) proteins. Immunoexpression of the proteins was quantified using image-J software, the data analyzed with SPSS version 20 and values compared using t-test and one-way analysis of variance. The histological results showed no significant variation in hepatic histomorphology of treated Groups 2–4 relative to non-treated Group 1. However, the immunohistochemical results showed significant (p< 0.05) down-regulation in Ki-67 protein expression and a concomitant significant (p< 0.05) up-regulation in p53 protein expression in hepatic tissues of treated Groups 2–4 relative to non-treated Group 1.These inverse expression patterns of cell proliferation and tumor suppressor proteins following exposure to methanolic extracts of C. owariensis may suggest the antiproliferative potential of the plant extracts.

Regeneration potential of different explants during micropropagation of neem tree (Azadirachta indica A. Juss.)

Azadirachta indica A. Juss., (Neem), a prodigious multipurpose tree, has immense potential to benefit mankind and to protect the environment. In order to investigate the effects of three different explants for its regeneration potential, de embryonated cotyledon, immature zygotic embryo and nodal segments from a 30 year old neem plus tree were used. Half strength MS medium with benzyl amino purine (3 mg/L) and naphthalene acetic acid (0.5 mg/L) and casein hydrolysate (1 g/L) was effective in shoot bud sprouting from both nodes and cotyledons. Half strength MS medium fortified with TDZ (0.2 mg/L) was effective for induction of somatic embryogenesis from zygotic embryos. Shoot buds initiated from the cotyledons produced a maximum number of shoots per explants (4.33) which on further sub culturing induced maximum multiple shoots (15) on half strength MS medium fortified with BAP (1.5 mg/L), NAA (0.5 mg/L) and CH (400 g /L) and the nodal explants induced only 4-5 axillary shoots on further sub culturing. Even though immature zygotic embryos produced more number of somatic embryos per explant (24.97) within a short time (30-45 days), the plantlet conversion was poor (25.52 %). In vitro rooting was observed in half strength MS medium supplemented with IBA (2 mg/L). The regeneration potential of de embryonated cotyledons through a simple regeneration system may be beneficial for efficient mass propagation of selected plus trees of neem.

A review on chemical constituents of essential oils of Aframomum genus

Aframomum K.Schum is a genus native to Africa belonging to Zingiberaceae. Members of the genus Aframomum are the aromatic and perennial rhizomatous herbs. Many plant parts of Aframomum species contain essential oils, including fruits, seeds, leaves, stems, rhizomes, pods, husks, pericarps, limbos and leaf sheaths. The major constituents of Aframomum plants are mainly composed of sesquiterpene hydrocarbons, oxygenated monoterpenes, oxygenated sesquiterpenes and monoterpene hydrocarbons. The present work provides the comprehensive information regarding the volatile components of various Aframomum species.

Virtual screaning of anticancer efficacy of phloretin against apoptotic targets – An In Silico molecular docking study

Recent advances demonstrate phytochemicals to be a potent anticancer therapeutic agent as various anti-cancer targets. This study depicts the anti-cancer potential against certain crucial common cancer targets leading to cancer cell proliferation and survival. The main objective of this study is to study the anti-cancer potential of phloretin against certain cancer targets. Ligand analysis was performed and Phloretin was chosen as the experimental ligand and Bcl-2, NF Kappa B, Carbonic anhydrase I (CA-1), Inducible Nitric Oxide Synthase (iNOS), Endothelial Nitric oxide synthase (eNOS), Caspase 3, and Caspase 9 proteins were chosen as targets. Induced fit molecular docking was performed by the use of Glide 6.5 software (Schrodinger - 2015). The docked poses were further evaluated based on binding energy, Conformational changes, and the amino acid residues involved in the protein-ligand interaction. The docking results depicted that phloretin showed notable binding affinity especially with carbonic anhydrase I, ENOS, and INOS. It also showcased significant potential against Caspase 3 and NF Kappa, thereby showing its potential as an effective anti-cancer therapeutics. During this study, the Inhibitory potential of Phloretin was studied as a result of this molecular docking study. This Insilico study revealed the binding efficiency of phloretin against the aforementioned targets. In vitro analysis is required for further validation of this data.

Assessing antioxidant system and yield of maize (Zea mays L.) inbreds under elevated temperature condition

Maize (Zea mays L.) is the most important food and feed crop grown under diverse soil and climatic conditions. Among the cereals, demand for maize is increasing year after year, but fluctuation in climatic conditions especially the temperature extremes is the current and future threat in maize cultivation. Each degree Celsius increase in global mean temperature causes yield reduction up to 7.4 per cent in maize. The high temperature stress impact at the reproductive stage affects grain filling rate and duration. Adaptation of maize crop to future warmer climatic conditions requires a better understanding of physiological responses to elevated temperatures. With this view, a pot culture experiment was conducted at the Department of Crop Physiology, TNAU, Coimbatore during the summer season of 2020. Two maize inbreds viz., UMI 1230 and CBM-DL- 322 were taken for the study and exposed to high temperature stress treatments viz., T1 - ambient, T2 - ambient+4°C and T3 - ambient+6°C (44°C) for 10 days during the reproductive stage to assess the changes in biochemical and yield traits. The ambient+4ºC treatment revealed that the maize inbred line CBM-DL-322 recorded lower malondialdehyde content with over production of antioxidant enzyme activity (superoxide dismutase, catalase and ascorbate peroxidase). Cob weight and seed set parentage showed a negative correlation with both elevated temperatures. It is concluded that the maize inbreds line CBM-DL- 322 performed better at an elevated temperature at ambient+4°C and recorded more cob weight (57.09g) compared to UMI 1230 inbred (43.56g).

Salicylic acid and thiourea ameliorate the negative impact of salt stress in wheat (Triticum aestivum L.) seedlings by up-regulating photosynthetic pigments, leaf water status, and antioxidant defense system

Salinity is one of the most important abiotic stress inhibiting wheat (Triticum aestivum L.) growth and development. Therefore, finding efficient strategies to prevent salt-induced growth retardation and yield loss is critical for modern agriculture to sustain production. The role of exogenous salicylic acid (SA) and thiourea (TU) in regulating salt tolerance was investigated by evaluating morpho-physiological characteristics and antioxidant response in two wheat genotypes at the seedling stage. In both wheat genotypes, salt stress reduced growth characteristics and leaf water status, photosynthetic pigments, while simultaneously increasing the Na+/K+ ratio, hydrogen peroxide (H2O2), and malondialdehyde (MDA). In contrast, exogenous application of SA and/or TU alone in the salt-stressed plants significantly reduced the negative effects of salt stress and improved the growth performance by up-regulating photosynthetic pigments, leaf water status, and proline content in both genotypes. Besides, when compared to seedlings treated only with salt stress, SA and TU played an important role in maintaining lower Na+/K+ levels and reducing oxidative stress by lowering MDA and H2O2 levels in salt-stressed plants through boosting the activities of antioxidant enzymes such as catalase, ascorbate peroxidase, and peroxidase. In addition, hierarchical clustering and principal component analysis revealed a significant interaction among growth characteristics, chlorophyll content, carotenoid content and antioxidant activity with the salt, SA, and/or TU treatments. The findings suggested that exogenous application of SA or TU could be a useful technique for reducing the negative effects of salinity on wheat growth and development.

Seaweed effects on plant growth and environmental remediation: a review

Seaweeds are plants found in sea that have tremendous applications in the fields of agriculture and environment. It comprises of three giant classes with a large number of different species. their ability to adopt to various conditions qualifies them more applicable to various environmental and agricultural arena. Agriculturally, both three classes Phaeophyta, Rhodophyta and Chlorophyta, have significant roles in promoting plant growth and productivity and soil protection as well as reclamation with class Phaeophyta has highest contribution due to its alginic acid content and other multifaceted components that are higher followed by Rhodophyta and Chlorophyta. Seaweed (living or dead biomass) has ability to phycoremediate environment against heavy toxic metals and lessen the excessiveness of non-metal inorganic elements via physisorption, chemisorption with the aid of binding sites provided by proteins and carbohydrates functional groups existing in their cell walls and secretion of organic acids and intracellular transformation and accumulation. Seaweed is an important factor in environmental remediation and soil restoration processes.

Response of morphological and biochemical traits of maize genotypes under waterlogging stress

Maize (Zea mays L.) is one of the most important cereal crops cultivated around the world. Waterlogging stress is a major production constraint of maize production in rain-fed agricultural systems. The main objective of this experiment was to investigate the effect of continuous waterlogging on morphological and biochemical traits of maize genotypes at the vegetative stage. Ten maize genotypes were treated under no waterlogging (control) and continuous waterlogging of five centimeters depth for 10 days. The treatments were applied to the plants at their 45 days of age. Visual leaf injury scores from Leaf 4 (youngest leaf is the reference point) to Leaf 7 separated tolerant and susceptible genotypes. Waterlogging stress significantly reduced the total number of live leaves and chlorophyll content in leaf tissues in susceptible genotypes. The anatomical study revealed that tolerant maize genotypes produce a large number of aerenchyma cells under waterlogging stress compared to susceptible genotypes. The enzymatic activities of ascorbate peroxidase (APX) and peroxidase (POD) exhibited a greater increase in tolerant genotypes than susceptible genotypes whereas the contents of reactive oxygen species (H2O2) greatly increased in susceptible genotypes than tolerant genotypes under waterlogging stress compared to control. Principal component 2 (PC2) indicated that increasing plant height in the genotypes BHM-14, BHM-13 and BHM-9 was associated with waterlogging tolerance. The findings of this experiment will add value to maize breeding to screen out maize genotypes for waterlogging stress tolerance.